Sfru003299.2
Basic Information
- Insect
- Spodoptera frugiperda
- Gene Symbol
- SMARCC2
- Assembly
- GCA_011064685.1
- Location
- JANIPB010001945.1:1308299-1316527[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3 2.1e+03 -0.7 0.1 33 46 121 134 119 134 0.91 2 2 3e-15 4.6e-12 46.2 0.1 3 44 551 592 549 594 0.95
Sequence Information
- Coding Sequence
- ATGAAAGTGTTCATGGACATGAAGCCAGGCGGCTCCCTGTGCACGGTGCTCGCCACCATGTTCCGCTTCAAGTCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAATCCTTCGCGTAAGGACCTGAACGTGCAGATGATGATGGAGATCGAGTCCTCGTTGCTCGGCGCTGAAGTCATCCGCTCGCCCTGCGTCTTTATACGACCCGACGTCGACAAGGCCACCGCCAACAAAGTCAAGGATATCGTTGGTAACCATCAAGGAGAGATATGCGAGGACGAGGAGGACGCGACGCACATCGTGTACCCGACCGTGGACCCGCTGGAGGAGGAGTACGCGCGGCCCGTGTTCCGGCGCGGGAACCATGTGCTCGTGCACTGGTACTACTACCTGCCCGACAGCCACGACACTTGGGCACAAGCTGACTTACCCGTGGACGTCCCAGAGACAGTGAGCTGGGACTGCAACCGGTCGGAGCCGTGGCGCGTGTCGGCGTCCTGGGCGCTCGACCTGCCGCAGTACAACGAGTGGATGAACGAGGAGGACTACGAGGTCGACTCCAACGGCAAGAAGAAGATCCACAAGCTGCGTCTGTCAGTGGATGATCTGATCCCGGGAGCTGAACCTTCGAGCAAGTCCAAGAAAGGCAGCAAGAGGAAGCGATCTCCATCACCACCGCCGCAGAAACATGGCAAGAGAAAGAGTCGCATAACCAAACGCCGCGAGAATGACGTGGACGAAGAGGAAGACAACGCGTCCCGAGATAACACTGACGCTGTACCTACTCCAGAGAACGAAAGAGCTGCCGAGAGTGAGTATTTCATTCATATGTACTGTAATTTGACTATTAAAACGAAGCGCATTGGGTCCCGAGTGCGGCGCCCCAGCAGCGTGGCGGGCGGCGCGGAGGGCGCCAGCGAGGCCCCCGCCACGCCCGCACCGCCGCTCGACGCGCACGACGACTCGCAGGGCAAGCACTCCGACTCCAACACGCAGGAAATGCTAACAAAAGAGGAGTTGGAAGACAACGTGACGGACCAGACGCACCACATCGTAGTGCCGTCGTACTCCGCGTGGTTCGACTACAACTCCATACATACCATCGAGAAGAGGGCCCTGCCCGAGTTCTTCAACGGAAAGAACAAGTCCAAGACTCCTGAGATATATCTCGCTTACAGAAACTTCATGATCGACACGTACCGGCTGAACCCGACGGAGTACCTGACGAGCACGGCGTGCCGCCGCAACCTGGCCGGCGACGTCTGCGCCATCATGCGCGTGCACGGCTTCCTCGAGCAGTGGGGACTCATCAACTACCAGTTGGAGGCGGAGTCCCGTCCGACGGCGATGGGTCCGCCGCCGACGTCCCACTTCCACGTTCTGTCGGACACTCCGTCCGGCCTGCAGCCACTCGTCACGCGGCCCACGCAACCTAGACCCGCGGAGAACGTGCCGAAAGTGGAGCCAGGCCTTCCCAACGGTGCGGAGGCAGGAGCCGGGGCTGCGCCCCCGGCCGCGCCTGTCAAGCCTGAACCGGCACTCGAACTCGGCACCGCACCCGGACTCAAACTCGACCAGTTTGACGTCGACTGCGTATATTCCAGTACCGCTGCGGGTCAGCCAGCGGCGGGGCGCGGGCGGGCCTGGACGGAGCAGGAGACGCTGCTACTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGGGTCGCGGCACACGTCGGCTCCCGGACGCAGGACGAGTGCATCCTGCACTTCCTGCGACTGCCCATCGAGGAGCCCTACCTGCACGATGCCACCGCCGGTGGCGCAACCCCCGTGATGAGCACCGTGGCCTTCCTCGCCTCCGTCGTGGATCCGCGCATCGCCTCCAGAGCCACCAAGGCGGCTATGGAGGAGTTCGCGGCTATCAAGGACGAGGTCCCGGCGGCCATGATGGAGGCGCACGTGAAGGCGGCGGGCGCGCACGGCCCGGCCGCCGCGCTGGCCGCCACCGGCATCGCAGGCACCGCGCCCGACCTCTCGCCCAGCGCTGAAGCGAAGAAGGAGGGCTCATCAGACATCAAGGCGGAACCTATGGAGGTAGAAGAAGGCGAGTCCAAGGTGAAGGACCGAGCCGCAGGAGGCGCCCGCCGCGCCCGACGCTGA
- Protein Sequence
- MKVFMDMKPGGSLCTVLATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMEIESSLLGAEVIRSPCVFIRPDVDKATANKVKDIVGNHQGEICEDEEDATHIVYPTVDPLEEEYARPVFRRGNHVLVHWYYYLPDSHDTWAQADLPVDVPETVSWDCNRSEPWRVSASWALDLPQYNEWMNEEDYEVDSNGKKKIHKLRLSVDDLIPGAEPSSKSKKGSKRKRSPSPPPQKHGKRKSRITKRRENDVDEEEDNASRDNTDAVPTPENERAAESEYFIHMYCNLTIKTKRIGSRVRRPSSVAGGAEGASEAPATPAPPLDAHDDSQGKHSDSNTQEMLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLINYQLEAESRPTAMGPPPTSHFHVLSDTPSGLQPLVTRPTQPRPAENVPKVEPGLPNGAEAGAGAAPPAAPVKPEPALELGTAPGLKLDQFDVDCVYSSTAAGQPAAGRGRAWTEQETLLLLEALELHRDDWNRVAAHVGSRTQDECILHFLRLPIEEPYLHDATAGGATPVMSTVAFLASVVDPRIASRATKAAMEEFAAIKDEVPAAMMEAHVKAAGAHGPAAALAATGIAGTAPDLSPSAEAKKEGSSDIKAEPMEVEEGESKVKDRAAGGARRARR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01425017;
- 90% Identity
- -
- 80% Identity
- -