Tdiv012449.1
Basic Information
- Insect
- Tetrapedia diversipes
- Gene Symbol
- znf423
- Assembly
- GCA_033822845.1
- Location
- JAOPTO010001127.1:1040984-1053571[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 8.6e-06 0.0011 20.0 1.5 1 23 92 114 92 114 0.98 2 20 0.49 63 5.0 3.9 1 23 120 142 120 142 0.97 3 20 1.1e-06 0.00014 22.8 4.3 1 23 148 170 148 170 0.99 4 20 0.00023 0.029 15.5 0.2 1 23 176 198 176 198 0.99 5 20 0.00017 0.023 15.9 0.6 1 23 354 377 354 377 0.96 6 20 0.39 50 5.3 0.1 2 23 388 410 387 410 0.87 7 20 0.22 28 6.1 0.1 3 23 473 493 472 493 0.97 8 20 0.006 0.77 11.0 0.8 1 23 505 527 505 527 0.97 9 20 0.0026 0.34 12.2 0.4 1 23 536 559 536 559 0.92 10 20 3.8 5e+02 2.2 0.2 1 23 564 587 564 587 0.91 11 20 0.1 13 7.1 2.0 2 23 661 682 661 682 0.96 12 20 0.0097 1.3 10.4 0.1 1 23 687 710 687 711 0.94 13 20 1.7 2.2e+02 3.3 0.1 2 23 774 797 773 797 0.83 14 20 0.00019 0.025 15.7 1.1 2 23 813 835 812 835 0.96 15 20 1.1 1.5e+02 3.9 0.6 1 12 844 855 844 867 0.76 16 20 0.002 0.26 12.5 0.1 2 23 1056 1078 1055 1078 0.96 17 20 0.076 9.8 7.6 0.3 1 23 1088 1111 1088 1111 0.96 18 20 1.3 1.7e+02 3.7 0.4 2 23 1124 1145 1123 1145 0.94 19 20 0.49 63 5.0 0.1 2 23 1154 1176 1153 1176 0.93 20 20 0.053 6.9 8.0 2.1 1 23 1183 1206 1183 1206 0.97
Sequence Information
- Coding Sequence
- ATGTTGTTTAAGGGGAACAGTTCGAGGCTGGAATTGTTAATAGGAAAAATCCAGGCCCACAAGGAGCCTTCTCAGGAGGAACCACATAAATCCAAAGAGGCCTTGGGGACCGGAAGTTCGTCGTGGCAGAGCGAGGATGGCGGGCCAAACTCGCGACGCGGCGGAGAGACGCCGTCCTCTTGCGCGACTCCGACGTCGGCCAGCTTCCCGTCGGAGCCCGAGGTGGACGCCGACGTCGGCGTCAACACTGACGGAAACAACGCGACCGCACCTTATCCTTGTCAATTCTGCGATCGCACGTTTCCTCGGCTTAGCTACCTGAAGAAGCACGAACAGAGTCACGGTGACCAAATGCCGTACAGATGCAGCTGGTGCGCCAGGTTGTTCAAACATAAACGAAGCAGAGATCGACACGTGAAACTTCATACCGGAGACCGAAGATATCGATGCACGCACTGCGAAGCTGCTTTCTCCAGAAGcgaccacttGAAAATTCATATGAAGACCCACGACACCCAAAAACCTTATCAGTGCACAGCCTGCTCTAGGGGATACAACACGGCAGCTGCCTTAACGTCCCACATGCAGTCGCACAAGAAACACCATCAGTCCCAAGGATCGGCGAAGCTCCAGGACATCGATTACGGCAGAAGAAGCGTATCCTCCCACAGCACCTCCTCGCCGCCCGTCCCGAGCTCCCCTTCTCCATCTTTGAATCTAAGCTTGAACCCGAAAGCCGGCTTGAAGAGCAGCTCCCAGGGCAGCGCATCGACAACTCCGATTCTAAGCTCACCCTTGAAACTGGCCTGTATGTACTGCACCAGGGACTCATTCAGCTGTATGCAACAGCTCCAAATGCACGTGCACACGATGCATCAGGCAATCCTGAGCGGAGAAACAACCGTGGCCGTGTCTCCGTCCCCCAACCGAGCCACGGAGCTGGCTTATCAGCGCGAGAAGATTCCGGATCGTCCCGAAGGATCCTCTAAGGACCACGAGAGAAAGCACCAGCAAGAGGATTCCGAAAGGACACCGGAGAAAGATCGCTATGAAAACACGTTCACGTGCAACCAGTGCACCATGAAGTTTTCCAGCCTAGGCTCATTGAGGGATCACTTGATCTCCATTCATAGAACCGACAACTTCGGGTCCGCCTTGATGATGTGCCCCCTTTGCGGCATTCCCTGCACCTCTACAGCAGCTTATGCGGAGCACTACGTGCTGCAACACTGTGAGAACCGAAGCGCGGGTCTCCTAGAAAGCAGGGACTACGTGAACACCAAGATGAACGGAAGCTACGACTCCAAAAGCTCCAGGAGCCAGAAGTGCAAAGAGCAAACAGCCTCCGAGCCAGCAGACCTAACCAGCAAACACTCCGCCGGCGCGGAGAGCAATTACACCGCTGGAACGCTGTTGTGTGGCCAGTGTGGGGCAGCCTTGAGGGACTTCGAGTCTTTTAGAGAGCACCTAGCCAGACATCTTCAAGCGGATCATCGGAACGACGTCCTCAGACACTCCTGTCCCAAGTGCGAGGCCACCTTCCAGGACAGAGAGGACATGCTGGTGCACCTAACCAAGCATTATCTGGGACAGATCAGCAAGGAGTACGCTTGCGGAGCTTGCAAAAAGTTCTACCCACATCCTGATCTCCTACAGAGGCATCTGCTTGACAGCCACGCTCACCATCTCTACAGATGCGCTCTGTGCAGGGACACCTTCGACTCCCGTGTAGCCATACAGGTTCACTTCGCTGTAAAACATAGCCAGGAGTGCAGAATTTATCGCTGCAACGCTTGCACGGTGCCTAATAACGAGAATTCGCCGGGAAATGCACCAGGGGAAGGGAAGAGCTTCTTTAGGAGTGAATCCGAGATGGCGAACCACGTGAGGAACGTCCACGCTCCTCCTACAGTGTCGAGCAGCAGCCCTGTGGCCAGGAGTCCCGCTTCCACTCCTGGGATAACTGGGAACGCAGGGCCGAGATGTGTATTCTGCGGAATCTGCTGCAGTTCCGAGCTGGAACTCCAGCTACATTTGGCCAGTCACTCGGGTAGTCTGTACAGGTGCCCGGTCTGCAGAGAGGGATTCGCCGTGGAGTTCCTGTTGGATAGGCACATTGCTCAAGTGCATCACTCCGGCGAACACCCGAGTGCTGTGAGGAGCAGTTCCAGGGAGAATGGAAGGATTGGTAGACCACCAAGGTTGCAAGAAGAGTCGAAATCTCAGAAAAGAGGTCGTTCTCCAGCCTCCAGCAACAACAACTCTCTGAACCAACGGGATAACAATAAACGTCCAAACTACACCAACACATCATCCCAGCAGTGCGACCTCTGCGAGAGAGGAGAGTTCTCCAGCGAAGCAGAGCTTCAAGCCCACAAGAAGCTTGCTCATGCTCCAGCTAAGCTGCAAAATAAATCCCTTTCGAACTTAAGCATGACCTGTGCATACTGTGGTGAGGTGTGTCGCTCTAGAACCGAGCTGGAGACCCACACGAGGATTCAGCACGCGTCCAATGAGCCTGGAGGACGTCACAAGTGCAACATCTGCGATGAGGTCTGTCCCTCGGGAGCAATCCTGGCCGAGCACAAGCTACAGAAGCATTGCAAGATTCAGTTGAGCGACACCTGCATCGTTTGTCGAGGAAACTTAATCTCAGAGACGCAATTTTTGGAGCACGTGCAGAGACACAGCCTGGAGAACGTGGATCCCCAGCAAAGACTCGACGGTTCTCTTCCTCATCTGCCTGCAGCGTGCGTGGTCTGTAGACAGACGTTGATCAGCGACTTGGAGTGTCGACTGCACGCCAGACATCACTTGAGAGCCTCGACCGGGTCTCACAGCGTGGGCTCCAGTCCTAGTCCCAATCCAAAGAAACAGAGCCCAAGTTGCTGTCTCTGTTTAAGAGATTACTCGTCCGACGACTTCGTTAATTTGCCTCCAAATCATATTAGCGGAGGGGGACAGACACTGAGGGTCTGCAAATCCTGTTACATTCGACATTCTCAGGGTCTACCTATTTTAAATTCACCGTACGAGCCTGTCAGATCTAAATGCGATCGCCCTTGGATATCCAGCGGTAAAGACGGCCAATGGGATGGTTCCAGAGACAGATGGGAGTCCGAGGGTAAGCTTAAGGAAGACATAAACGAGATGAACGACAGTAAGAGATGTCAGGACTGTGGAGTGAAGTTTGAAGATCCTGAAGAAGCGGAGAAGCACAGAATGGTGGAGCATGAAAAGGTTGGAGCGGTTTCGAACACGTACACGTGTATACAGTGTCAGATGTCGTTTCCAACAGAGGCGAAGATACAACAGCATGTAAGAAAGGAACACCTGGAAGCGTCAGGAAAAGCTTCTATTGAAGCACTGCGATGTCATTTGTGTTTATTTGAAGCTAGCAGTCCGTTACAATTGCAAAGCCATTTAATAGAGCACACTTTTGCCGGATGTGCCGCTCTCAGCTGTTACATTTGCCAGTCTCTGTTCACTGCACCCATCGGTCTCCAgAATCATATGCTCCAAGAACACGGTCTAGGAGCTCGCCCCTACGACTGTTCCGAGTGCACCCTCAAGTTTTTCTTCAGAGCGGAGCTTGATCACCATGTGCTGACATTCCATCGACCAGGGGAAGTGCCCTCGCCTACTGAAAACCTGCAGAACACAGTAGAGTCGAAACCCAGAGACACGGAAAAGAGAAACTGCGAGAACCAAGTGACGGTGAAAGAAGAACTGTTGCCGGAAGTTGCAGATGAAGAGGAAGAGATTAACGTGGATGAACAAGTGGAACAAGATGATCAAGAAGCGAATAAACTGTTGGAAACTGAGAAGTTAAAAACTGAACtggaagagaaaaatatttccgAGAATATGGAATCGTGA
- Protein Sequence
- MLFKGNSSRLELLIGKIQAHKEPSQEEPHKSKEALGTGSSSWQSEDGGPNSRRGGETPSSCATPTSASFPSEPEVDADVGVNTDGNNATAPYPCQFCDRTFPRLSYLKKHEQSHGDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCTHCEAAFSRSDHLKIHMKTHDTQKPYQCTACSRGYNTAAALTSHMQSHKKHHQSQGSAKLQDIDYGRRSVSSHSTSSPPVPSSPSPSLNLSLNPKAGLKSSSQGSASTTPILSSPLKLACMYCTRDSFSCMQQLQMHVHTMHQAILSGETTVAVSPSPNRATELAYQREKIPDRPEGSSKDHERKHQQEDSERTPEKDRYENTFTCNQCTMKFSSLGSLRDHLISIHRTDNFGSALMMCPLCGIPCTSTAAYAEHYVLQHCENRSAGLLESRDYVNTKMNGSYDSKSSRSQKCKEQTASEPADLTSKHSAGAESNYTAGTLLCGQCGAALRDFESFREHLARHLQADHRNDVLRHSCPKCEATFQDREDMLVHLTKHYLGQISKEYACGACKKFYPHPDLLQRHLLDSHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRIYRCNACTVPNNENSPGNAPGEGKSFFRSESEMANHVRNVHAPPTVSSSSPVARSPASTPGITGNAGPRCVFCGICCSSELELQLHLASHSGSLYRCPVCREGFAVEFLLDRHIAQVHHSGEHPSAVRSSSRENGRIGRPPRLQEESKSQKRGRSPASSNNNSLNQRDNNKRPNYTNTSSQQCDLCERGEFSSEAELQAHKKLAHAPAKLQNKSLSNLSMTCAYCGEVCRSRTELETHTRIQHASNEPGGRHKCNICDEVCPSGAILAEHKLQKHCKIQLSDTCIVCRGNLISETQFLEHVQRHSLENVDPQQRLDGSLPHLPAACVVCRQTLISDLECRLHARHHLRASTGSHSVGSSPSPNPKKQSPSCCLCLRDYSSDDFVNLPPNHISGGGQTLRVCKSCYIRHSQGLPILNSPYEPVRSKCDRPWISSGKDGQWDGSRDRWESEGKLKEDINEMNDSKRCQDCGVKFEDPEEAEKHRMVEHEKVGAVSNTYTCIQCQMSFPTEAKIQQHVRKEHLEASGKASIEALRCHLCLFEASSPLQLQSHLIEHTFAGCAALSCYICQSLFTAPIGLQNHMLQEHGLGARPYDCSECTLKFFFRAELDHHVLTFHRPGEVPSPTENLQNTVESKPRDTEKRNCENQVTVKEELLPEVADEEEEINVDEQVEQDDQEANKLLETEKLKTELEEKNISENMES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00684951;
- 90% Identity
- -
- 80% Identity
- -