Basic Information

Gene Symbol
XBP1
Assembly
GCA_033822845.1
Location
JAOPTO010000411.1:403839-405601[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.2e-14 2.6e-11 44.0 16.5 2 62 84 144 84 153 0.94
2 2 2.9 3.5e+03 -1.2 0.2 35 49 203 217 200 222 0.74

Sequence Information

Coding Sequence
ATGAGCGTATTGAAGAGTGTTATCATCACACTGCCTAAGGGCCTGACAAAGGCGCCTGGCGTTATTTCCGCAAGTGAATTATCGAAATCTGTgccgaaattaaatttcagtacCTCTGTTTTAACCGACAAATCGAGGATGGATTCAAAAAAGATTACTAAACACGAGGAAATTCAAGATGATAGTGCATTATTTAAAACGGATGTCTGTGTTCGCGGAAAAAAGCGACGGCTGGATCATTTGACGTGGGAAGAAAAGTTGCAAAGGAAgAAGTTAAAAAATAGGGTAGCAGCTCAAACTTCTCGGGATCGTAAAAAGGCTAAACTTGACGAGTTGGAAGATACTGTTCGAATGTTAAGGGAAGAAAATGAATTACTAACGCAGGAATGTGCGATGTTAAGATCACAAAATGATGTATTGGTCACCGAAACAAAAAGATtgaggaaagaaagagaggctAAAAACACGGAAGAATTTGTCTGGTGGAACAACACAGCTGGCACCACCTCTGACACTTACCCCAGGAGCAACAATTCTACTGAAGATACTGACCATCTACCTCCTCTTGAAGAATTGTTTGGAGACCTCCAAGGCGACGATTACATCGAACGACTTGAAGAACTTGCGGAAAGTCTTTTGCGAGAGGTTACCGCAGAAGTGGAAGCAAATCCTAATAGAACAAATGAAGTATCAGCCAAGGAAAATACCATTGAGAAATGTGACCATTCAAAAGGAGTGGTGGGGCAGACATCAAAAGATGTGGAAGCCAATGGAACCTGTAGAAGCATAAGTCAACATCAAACATGGCATCCTGTTTCTAGCACAACCAGTACACCTTATTCCACAAATACAACTGCAACTGTATTAGTAAAATCAGAAATCGAAGTAAAACAAGAAGCCGAGACGCACGATCTGGATACCATTTATGGTACCTACGACGAAGCGACCAATTCTGTAACAATCATTTATCCCGGTGACGAAACCAGCGTGGGCATTCAAGAATGCGTCCAAGAAGTGGTTACGGACGGTGTTTGTTCAAACGAGGATTCGTCGTACTTAACgtcaaataattattccaaTCAGTTTTCACCATCTTACACAAGCACAGATTCGATGTCACCATCGAGTACACATTCCGAAGATATGgatagtaattttattcaaacaaaATTAGACTGTAACGCGTCTGATTATGGGTATGAGTCACACGGTTCTCCAAATTCAGATACAAggattgaaaaaaataatgtagGTTTGACGGATCTTTGGCACGAAAGTTTCTCCGAATTATTTCCTACATTAGCATGA
Protein Sequence
MSVLKSVIITLPKGLTKAPGVISASELSKSVPKLNFSTSVLTDKSRMDSKKITKHEEIQDDSALFKTDVCVRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEDTVRMLREENELLTQECAMLRSQNDVLVTETKRLRKEREAKNTEEFVWWNNTAGTTSDTYPRSNNSTEDTDHLPPLEELFGDLQGDDYIERLEELAESLLREVTAEVEANPNRTNEVSAKENTIEKCDHSKGVVGQTSKDVEANGTCRSISQHQTWHPVSSTTSTPYSTNTTATVLVKSEIEVKQEAETHDLDTIYGTYDEATNSVTIIYPGDETSVGIQECVQEVVTDGVCSNEDSSYLTSNNYSNQFSPSYTSTDSMSPSSTHSEDMDSNFIQTKLDCNASDYGYESHGSPNSDTRIEKNNVGLTDLWHESFSELFPTLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00675781;
90% Identity
-
80% Identity
-