Basic Information

Gene Symbol
XBP1
Assembly
GCA_028830335.1
Location
JAMYCR010000016.1:11632217-11636487[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.7e-15 1.2e-11 45.3 15.1 2 62 84 144 84 147 0.94
2 2 2.2 2.9e+03 -0.9 0.2 35 49 203 217 200 231 0.76

Sequence Information

Coding Sequence
ATGAGCGTACTGAAAAGTGTTATCATCACCCTGCCTAAGGGCCTCGCGAAGGCGCCTGGCATAATTTCCGCGAGCGAGTTGCCGAAATCCGTGCCGAAACTAAATTTCACCGCCTCCGTTTTGACGGACAAATCGAGAATGGAGTCGAAGAAGATCGCGAAGTTGGAAGAGATTCAAGACGAAGGCGGATTGTTCAAAACGGATGTGTGCGTTCGCGGAAAAAAACGGCGGTTGGACCACTTGACGTGGGAGGAAAAGTTACAAAGGAAGAAATTGAAGAACAGGGTGGCGGCTCAAACCTCTCGGGATCGGAAGAAAGCTAAGCTCGACGAGTTGGAGGAAACGGTGCGAACGTTGCGGGAGCAGAATGAATTGCTGACGCAAGAATGCACGATGTTGAGATCGCAGAACGAAGTGTTGGTCACGGAAACGAAGAGATTGAGGAAGGAAAGGGAGGCCAGGAACTCGGGAGAATTTGTCTGGTGGAACAACACAGCTGGCACCGTCTCTGACGCTCACACCAGGAGCAGCAATACTTCTGAAGATACTGACCATCTACCTCCTCTTGAAGAATTGTTTAGTGACCTCCAAGGAGACGATTACATCGAAAGACTTGAAGAACTTGCAGAAAGCCTTCTGCGAGAGGTTACCGCTGAAGTGGAAGCGAACCCTCATAGAACAAATGAACAAGTGTCAGTCAAGGAAAATACCGCTGAGAAATGTGACCATTCAAAAGGAGTGGTGGGGAAGGCATCAAAAGATGTGGAAGCCAGTGGAACCTGTAGAAGCATAAGTACAACACACCAATCGTGGCATCCTGTTTCTAGCACAGCCAGTATTACTACTACACCACTTTACACTACAAACACCACCACCCCTGCTATTGCACCTGTGTCAATAAAGTCGGAGGTCGAAGTGAAAGAAGAAGTGGAGCCGCACGATTTGGATACCATTTATGGTACCTACGACGAGGCAACCAATTCCGTAACCATTATTTACCCCGGCGACGAGGCAAGTGTCGGCATTCAGGAATGCGTTCAAGAAGTGGTTACGGACGATTCATCGTACTTAACGGCGAATTATTATTCCAATCAGTTCTCACCGTCTTACACCAGCACGGATTCTTCTATGTCACCGTCGAGTATACATTCCGAAGATATGGACAACGTTGTTAATTTCACGCGAACCAAGTTGGATTCGAACACGTCCGATCACGGATACGAGTCGCACGGTTCTCCGAATTCCGACGTTCGAATGGAAAAGAACAGCTTGGGTCTGTCCGACCTTTGGCACGAGAGTTTCTCCGAATTGTTTCCTACGTTAGCATGA
Protein Sequence
MSVLKSVIITLPKGLAKAPGIISASELPKSVPKLNFTASVLTDKSRMESKKIAKLEEIQDEGGLFKTDVCVRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEETVRTLREQNELLTQECTMLRSQNEVLVTETKRLRKEREARNSGEFVWWNNTAGTVSDAHTRSSNTSEDTDHLPPLEELFSDLQGDDYIERLEELAESLLREVTAEVEANPHRTNEQVSVKENTAEKCDHSKGVVGKASKDVEASGTCRSISTTHQSWHPVSSTASITTTPLYTTNTTTPAIAPVSIKSEVEVKEEVEPHDLDTIYGTYDEATNSVTIIYPGDEASVGIQECVQEVVTDDSSYLTANYYSNQFSPSYTSTDSSMSPSSIHSEDMDNVVNFTRTKLDSNTSDHGYESHGSPNSDVRMEKNSLGLSDLWHESFSELFPTLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01424131;
90% Identity
-
80% Identity
-