Basic Information

Insect: Tetramorium simillimum
Gene Symbol: RREB1
Assembly: GCA_011636635.1
Location: VBVQ01003194.1:3343-10336[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.4e-05 0.0017 19.3 0.7 1 23 62 84 62 84 0.97

2 15 0.00016 0.019 15.9 0.1 1 23 98 120 98 120 0.98

3 15 5.4e-05 0.0064 17.4 4.2 1 21 126 146 126 149 0.95

4 15 0.0071 0.84 10.8 0.0 3 23 246 267 244 267 0.96

5 15 0.0054 0.64 11.1 3.7 2 23 273 295 273 295 0.96

6 15 0.17 20 6.4 0.2 1 23 522 544 522 544 0.96

7 15 5.4e-05 0.0064 17.4 0.3 1 23 553 575 553 575 0.98

8 15 0.004 0.47 11.5 3.1 1 23 581 604 581 604 0.96

9 15 0.00045 0.053 14.5 3.1 1 23 974 997 974 997 0.97

10 15 0.00067 0.079 14.0 0.1 2 23 1266 1287 1265 1287 0.97

11 15 2 2.4e+02 3.0 11.1 1 23 1293 1316 1293 1316 0.97

12 15 0.041 4.9 8.4 3.2 1 23 1360 1384 1360 1384 0.96

13 15 2.9 3.4e+02 2.5 2.1 1 23 1464 1487 1464 1487 0.95

14 15 0.011 1.3 10.2 0.4 2 23 1540 1561 1539 1561 0.94

15 15 0.0025 0.3 12.2 5.2 1 23 1567 1589 1567 1589 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.4e-05	0.0017	19.3	0.7	1	23	62	84	62	84	0.97
2	15	0.00016	0.019	15.9	0.1	1	23	98	120	98	120	0.98
3	15	5.4e-05	0.0064	17.4	4.2	1	21	126	146	126	149	0.95
4	15	0.0071	0.84	10.8	0.0	3	23	246	267	244	267	0.96
5	15	0.0054	0.64	11.1	3.7	2	23	273	295	273	295	0.96
6	15	0.17	20	6.4	0.2	1	23	522	544	522	544	0.96
7	15	5.4e-05	0.0064	17.4	0.3	1	23	553	575	553	575	0.98
8	15	0.004	0.47	11.5	3.1	1	23	581	604	581	604	0.96
9	15	0.00045	0.053	14.5	3.1	1	23	974	997	974	997	0.97
10	15	0.00067	0.079	14.0	0.1	2	23	1266	1287	1265	1287	0.97
11	15	2	2.4e+02	3.0	11.1	1	23	1293	1316	1293	1316	0.97
12	15	0.041	4.9	8.4	3.2	1	23	1360	1384	1360	1384	0.96
13	15	2.9	3.4e+02	2.5	2.1	1	23	1464	1487	1464	1487	0.95
14	15	0.011	1.3	10.2	0.4	2	23	1540	1561	1539	1561	0.94
15	15	0.0025	0.3	12.2	5.2	1	23	1567	1589	1567	1589	0.98

Sequence Information

Coding Sequence: ATGTCGGGCGAGGACGTTGATAAGTGTTATTGTCCCGGCTCCATCTGCGGTTCGGTCTGGGTATCTGCTTCCGGAATACTTATGACTGGATCCAAGAATGGACCCGATCAGGAACAGGAAAACGAAACACAAATTGATGCTGCATCACCATCATCAAgcGTTGAATTGTCGGAGAATGGCACGCATCCATGCCCGACGTGTCCAGCGGTATTTTCCAGTTCCCACGAACTGACGAATCATCTGCGCGGCCACAATTCACCTCGCAGCACGGATTGCAGCGGCGAGGAGGACTACAGCTGCGGCGTATGCAATAAGGTGCTCAGCTCGGCGAGCTCGCTGGACCGGCACGTGCTGGTGCATTCGGGCGAGCGGCCGTTCAAGTGCAAGTACTGCGACATGTCGTTCACGACGAACGGCAACATGAACCGGCACGTGAGGTGCACCCATCGGATGGTGTCGCCCAACAGCTGCACGGATTCCGAGGGCAGCAGCGGCTCGGAGAGACCGGCGGCGACGAGCCAGGACGAGTACAACAACAACGAGATAGCCACGCGCAACTCGCCAGATCTGATCGACGATCAGCAGCCGTCGCCCAGCGGTAACCGCGCGAACAAGCGGAAGTGCCCGGACGAGGACATCAGCGACGTGGAGGAGCAGAGGAGGCACAAGATCCTCCTGAACAACACCAAGATGACGATCAGGTGTCGGCCGGAGGACGAGCTGAAGACCTTCGGCTGTCCGATCTGCGGTCAGGACTTCGCGAGCAGCGCGATTCTCGAGTCCCATATGGAGCGCGTGCACCCAGGCTCCCCGGCCACGTGCGAGACCTGCAACCAGTCGTTCAAGAATCATCGCGCGCTGAATCTTCATCGTTCGATGAGACATTACAAGAAGACTCCAGAGGGCAGCAACAGCCGTAGCCTGCGCAACACCGTGGACGGTTTCAGGGATCTGACGTTCATCGACTTCTCGTCCATCAAGTTCCCGACGATCGCTCGGGCGATGTGCGAGCGCGAGCTGCACCGGCCGGCCTCCGGCGAGGCCAACAGGTTCCAGTGTATGAAGTGCCTGCACGCGTTCCCCTGCAGGCAAGCCCAGCTGGCGCACGAGAAGGAATGCAAGGGCCCCTACAAGAACAAGAGAAACAGCAACGacaacaacaataacaacGACATCAGTACCAACAACAATCTCGAAACGGAGCTGGATGACCCGAGTCCGCAGCCCGACGATCCGAAGACGAAGCGCGAGATCTTCTTCGCTGTGCTGGATCTGCAGAACAAGTCCTTGGCGCACGAGATGAAGGAGCCGCGGGAATCGAGCGAGATCAAGGAGCCGAAGGAGACCAAAGATCTAGCGGATATCCCGAGCATCCTGTCTGTCAGTCTGAACGGACTGCAGACCTTTCCTCGGTCGGACGCGAGCACACCCGAGAACAACATCAAGTTCAACCCGAACGTTGGCTCTTCGGGTTCCTCGGGCACCTGTTCGTCCGAGTACAACGAAGAGGAGGCGCAGGACGCCTTCACTGCGGAATTTCGGAAAATGAAGCTGAAGGGCGAGTTCCCGTGTAGATTGTGCACATCCGTGTTCCCTAATCTGCGGGCGCTGAAGGGGCACAATCGCGCGCATATGAACGTAGAGCCAGGTATGTCGTATCCGTGCAATATGTGTCCGTTCACCAGCACTGATAAGGGCGCCCTGATGAAGCACCTGCGATCGCACAACGGCGATCGTCCGTTTGAGTGCTCTCTCTGCAATTATGCGTTCACCACCAAAGCAAATTGCGAGAGGCACGTGAAGAATCGTCACGGGATGATCAGCAAGGAGGACGTTAAGAACGCACTCATCTATCACCCGAGCGAGGACTCGACAAACGAAAACATCGAAAGGAGCTCGCCCAGAGTCGTCAGAGAAGACGTGCGGAAGACGCTTATTTATCCGAATGAACGCGAGGAGATCCCCCAACAACAGATACATTACCCGTCTATAGCGGTGGATTGTAATCCCGGGCCGTCGAACGTCCGCGCCGAGATGCTGATGAATCGCTACGATAAGTCAGACACGTTCGCCAGAGTGAAGATACAGGCTCTCAATCTCGTGAAAAAAGGCGCCGACGAAGTAGATTTGTCGCACGATCTGATCGTGAAATCTAATTACTCGAAgctcgacgacgacgtcgagtCAGGATCGTCGGACGGCAGCGTGTCTCTAGTCAGTGATACCAAAACAGATACACACCAAAGAATTCAAGCTAGTCCGATCAACCTGACGAAGCCCTCGACGAGCTCCGGCTTGAGCTCGGCGGGGGAGGACACTCCGTTGGACCTGTCCATGGATGTGTTGGATCTGAGCAGGAAGCGGAAGAGGGAAAGCGAGGATTCCAGCTTGCAGGACGAGAAGCGGTTTAAGAGCAATCAGCAGGAATTGTACGCCACAAACCCAGCGCTGCTGTTGACCCAGGCCTTGCTGAACAGAGCGCGCGAGAGCTCGCCGACAACGTCGCTCGAGACGCTTTACGCGAATACCATCTACCGTAATTTCGGCACGTTAAGCGCCGGTATGATACCGCCGTACTTCCTCGGTCCTCACATGTTCGGCCAGGAACTGGCCGCGAAGGGCAGGCTGCAGAAGGAGCTGGTTAGAGGCTTGCAGTTGACCGGCGGTGGCACACTCTCGGTTGATCCGTCGCTGCCCAGCACCAGTTACACGGCGTATTCGCAATCGAGGGACACCCCGCAAACCTCGAGCGAGCAGAATGCCTACGCGAACCTGATAAGCGCGCAGATGACCAACCAGGCCGCGCCGAGTCGCGAGAAGACGGACGGCATCTCGTCGAACGATCCCGTGAAGATGGTGCTCAAGAACGGAGTGCTGATCCCCAAGCAAAAGCAGCGCAGATACCGAACCGAGAGGCCATTCACCTGCGAGCACTGCACGGCGAGATTCACGTTGCGCAGCAACATGGAACGGCACATCAAGCAACAGCATCCGCAGTACTGGAGCCAAAGACCCCGTGGCGGACACTCGACCAGAGGCAGACCACCCGCGAGTCATCCGACCATGGTGCAGAATCCGTCAACGTCGCAGGTGGTACAGTCGTACTCGAGCATTCTCCCGAGCGTCGACACGCCGGGGGTCACGTCAACGGACTACGGCACGCATCCCATCTCGGAGGAGGTGAAATACGCGATTCTGGCGCAACAGCTGAAGGCCAACAAAATGGACGACAATGATTCGGACGACGAGATGGTAATAGACGAGGAGTCGGCCGATCGGGAGGCTCAGGAGCCGCAAGCTCAGCGTGAACCTGGCACGAGTTTACTGAGAGACCAGTTGGAGGGCAGCGAGAGTGTCAAAGACATCGTCATAAAGACGGAAGCGGTCGAATCCGCGGAGGAGACCTCGGAGGAAACCCCCGGTGAGCAGACCGCACGAAGTAACGTCGACGACGCCAATCCGGAAGAATCCACGGCCGCCGAAGGCAAGTCAGCGCGCGCTGAAGAAACGACCGTGGCCGAGTCCGCCGAGCGGGAGCAGGGCAAGCTCGAGGACGGGACACCCGATCTCGCGAGCGTCTCGAAGCTCTTGGACAACGCGTCCCACCAGTATCAGCAATTCCAGCCGCAATACCTGAGCGACGAGGAGGGCCCCGTTGCGTCGACCAGCGGCAACAATTCCGGCAGCGAGAAGTCCGACTCCATGAACTCGTTGAACTCCGGCAACGACTCCCCGACGaccaagaagaaaaagaagaagaagaagtcgGCGTACTCGATGGCGCCGAACCGCGTCGTCTGCCCGTACTGCGAGCGCCAGTTCCCGTGGACCTCGTCGCTGAGACGGCACATCCTCACCCACACCGGCCAGAAGCCGTATCAGTGCGTCCACTGCTCGCATCACTTCACCACCAAGTCCAACTGCGACCGCCACCTGCTGAGGAAGCATAAGGCGAAGGCGAACAAGATGCGCCGTGCCAGGAACTCATCCTCGCCCGACGTCCAGGTGGTcgccagcagcagcagcagcagcaacggcAGCAACACGTTCTCCATGAGGAACGTGCCCGAGAGGCCGTTCAAATGCCATCAGTGCCCGAGCTCGACGTTCGCCACGTTGGGCAACCTGAAGAAGCATCGGTCGAGCAAGCACCGCAAGAACGCGTCCAGATCGGAATCCAGCGATCAGCAGAACAGTCCGCCGCAGTGTACCGCGCAGAACGACCAGAGCGACTACGAGAGTCGCTCGTCGAGCATGTCCGACAACATGGAGAACACGCCGTCCGCTGTCGTGGCCGCGAAACCGACTTCTAACGCGTCCCCCTCCATAAACGATGCCACTAGGTCGCGCAAATCGCCAAGACTGTCGCCGAGTCCCGGCGACGTACCCTTCAAGTGTTACCTGTGCGACAGCGGCTTTTCGGAACGCCAGGACTGCTTGGACCACATCAAGATGAATCACAAGCGCTCGTACGAGATGCTGAAGGCCAAGGGCGCCCTCGACATGGCGTCCATGAACATAGACGCGACCGAAGATCAGATATTAGCGTCGCAGCAGCATCACAGCGACGGAGAGGAGAAGAAGGGCCGTTTTCCCGACTACAGCAACAGAAAGGTTGTGTGCGCTTTCTGCATGAGACGATTTTGGTCCGCGGAGGATCTCCGGCGTCACATGAGGACCCACACGGGCGAGAGGCCCTTCGAATGCGACATCTGCACCAGGAAGTTCACGCTCAAGCACAGCATGCTGCGTCATCGCAAGAAGCACGAGTCGGTGGAGTCCGCCATGTACATAGGCAACAGCGGCGACGAGGAGAACTCGCCCGCGCAGCCGCCGACGATAACCCCCAGGAGCCAGCAGCACTCGCCGATCTCCACCAACACCAGCAGGCCCCGCACCCAAGATAGAATCTCCCTGCCGACCGTCGCGGCGGTCGCAACGGCAGACGCGGCACCCTGCGCCCTGCGGTACAATCATTACGATAACATGGCCACCCTCACCGGGAGAATGGCAAACGACGGTCCTCAGGGCGCCGCTCTAGCCCCCTTGCCTTCTCCCCCGCCCCCCAGCGAGGACAACGACCTGATCTCCAATTTACTGGGGATACGCGAGAAAGGTTTGCTCGACAAGGTCCTTCTGAGCTCGGCGGACGACGCGGCGAAGTTGTTGGGAGTCAATCACAGCGAGTGA
Protein Sequence: MSGEDVDKCYCPGSICGSVWVSASGILMTGSKNGPDQEQENETQIDAASPSSSVELSENGTHPCPTCPAVFSSSHELTNHLRGHNSPRSTDCSGEEDYSCGVCNKVLSSASSLDRHVLVHSGERPFKCKYCDMSFTTNGNMNRHVRCTHRMVSPNSCTDSEGSSGSERPAATSQDEYNNNEIATRNSPDLIDDQQPSPSGNRANKRKCPDEDISDVEEQRRHKILLNNTKMTIRCRPEDELKTFGCPICGQDFASSAILESHMERVHPGSPATCETCNQSFKNHRALNLHRSMRHYKKTPEGSNSRSLRNTVDGFRDLTFIDFSSIKFPTIARAMCERELHRPASGEANRFQCMKCLHAFPCRQAQLAHEKECKGPYKNKRNSNDNNNNNDISTNNNLETELDDPSPQPDDPKTKREIFFAVLDLQNKSLAHEMKEPRESSEIKEPKETKDLADIPSILSVSLNGLQTFPRSDASTPENNIKFNPNVGSSGSSGTCSSEYNEEEAQDAFTAEFRKMKLKGEFPCRLCTSVFPNLRALKGHNRAHMNVEPGMSYPCNMCPFTSTDKGALMKHLRSHNGDRPFECSLCNYAFTTKANCERHVKNRHGMISKEDVKNALIYHPSEDSTNENIERSSPRVVREDVRKTLIYPNEREEIPQQQIHYPSIAVDCNPGPSNVRAEMLMNRYDKSDTFARVKIQALNLVKKGADEVDLSHDLIVKSNYSKLDDDVESGSSDGSVSLVSDTKTDTHQRIQASPINLTKPSTSSGLSSAGEDTPLDLSMDVLDLSRKRKRESEDSSLQDEKRFKSNQQELYATNPALLLTQALLNRARESSPTTSLETLYANTIYRNFGTLSAGMIPPYFLGPHMFGQELAAKGRLQKELVRGLQLTGGGTLSVDPSLPSTSYTAYSQSRDTPQTSSEQNAYANLISAQMTNQAAPSREKTDGISSNDPVKMVLKNGVLIPKQKQRRYRTERPFTCEHCTARFTLRSNMERHIKQQHPQYWSQRPRGGHSTRGRPPASHPTMVQNPSTSQVVQSYSSILPSVDTPGVTSTDYGTHPISEEVKYAILAQQLKANKMDDNDSDDEMVIDEESADREAQEPQAQREPGTSLLRDQLEGSESVKDIVIKTEAVESAEETSEETPGEQTARSNVDDANPEESTAAEGKSARAEETTVAESAEREQGKLEDGTPDLASVSKLLDNASHQYQQFQPQYLSDEEGPVASTSGNNSGSEKSDSMNSLNSGNDSPTTKKKKKKKKSAYSMAPNRVVCPYCERQFPWTSSLRRHILTHTGQKPYQCVHCSHHFTTKSNCDRHLLRKHKAKANKMRRARNSSSPDVQVVASSSSSSNGSNTFSMRNVPERPFKCHQCPSSTFATLGNLKKHRSSKHRKNASRSESSDQQNSPPQCTAQNDQSDYESRSSSMSDNMENTPSAVVAAKPTSNASPSINDATRSRKSPRLSPSPGDVPFKCYLCDSGFSERQDCLDHIKMNHKRSYEMLKAKGALDMASMNIDATEDQILASQQHHSDGEEKKGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFECDICTRKFTLKHSMLRHRKKHESVESAMYIGNSGDEENSPAQPPTITPRSQQHSPISTNTSRPRTQDRISLPTVAAVATADAAPCALRYNHYDNMATLTGRMANDGPQGAALAPLPSPPPPSEDNDLISNLLGIREKGLLDKVLLSSADDAAKLLGVNHSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01016049;
90% Identity: iTF_01355659;
80% Identity: -