Tpar008104.1
Basic Information
- Insect
- Tetramorium parvispinum
- Gene Symbol
- Bgb
- Assembly
- GCA_011638315.1
- Location
- VBVR01000043.1:65343-69793[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-47 5.2e-43 147.1 0.1 1 93 34 123 34 128 0.96
Sequence Information
- Coding Sequence
- ATGATGCACGCAATGAGCGAGCACGCGGGCGTGGGTGTGCTACCATTCGACGGAATGGGTCTGTACGAACAGCCACGTCCGCCCCGGCTCGTCTTCAAGATGCCGCGAGTCGTGCCCGATCAGAAAGCCAAGTTTGAGAGCGACGAGCTGTTCAGAAGGCTGAGTCGCGAGAGCGAGgtGAGATACACTGGCTATAGAGACCGGCCACTCGAAGAACGTCAAGTACGTTTCCAAAATGGCTGTCGGGAAGGCCACACAGAGATCGCGTTTGCGGCGACGGGCACCAACCTTCAGCTTGTTTTCGGCAACGCGTCTGGGAACTATCCCGTCGATCCTAACGACTGCGACTTCGACAAGGAACATGGCAAGttCGGAAATGATCCTGAAGGCACATATCCATCCTGTACATATCCTGTGCACATCCTGCTCGTAAAAGTTGAACGTACAGAACTGGACCTGAACGAGAGACAAAGGATGATGCGCTATGCTGACCGTATGCCCCTCGCATGTCGTCCTTTTTACCGGAACACCGTTGTGACGAATGTGTTTCGGGGTATTCACGGGACCTCGGTGTAG
- Protein Sequence
- MMHAMSEHAGVGVLPFDGMGLYEQPRPPRLVFKMPRVVPDQKAKFESDELFRRLSRESEVRYTGYRDRPLEERQVRFQNGCREGHTEIAFAATGTNLQLVFGNASGNYPVDPNDCDFDKEHGKFGNDPEGTYPSCTYPVHILLVKVERTELDLNERQRMMRYADRMPLACRPFYRNTVVTNVFRGIHGTSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01423407;
- 90% Identity
- iTF_01406991;
- 80% Identity
- -