Timm022117.1
Basic Information
- Insect
- Tetramorium immigrans
- Gene Symbol
- Mblk-1
- Assembly
- GCA_011636585.1
- Location
- VBVO01001741.1:1-15288[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-18 4e-15 55.8 0.1 1 45 381 426 381 426 0.96
Sequence Information
- Coding Sequence
- ATGGGCCGTAGGAGATGGAAGCAATACCAGGACACCCTGTACAGCGGCACCCGCAGCAGCGAATCGCAGCCCCACCATCGGCTTTATCCGGCGAGAGCCTGCAGAGGCATCATCTGCAGAACCATCATCACCTATCCGCGCCAGTCCAGGACCATCTACagctgcagcagcagcagcaacaggaGGATTCGCGCCGACGTCGACGGGGAGGAGGACGGAGACGAGAACGACGAGGAGACGGCACGGGGCCAGAACGAGGCGGAGAAACGGCTCAAGCTCGACGAGGACGCCGACAGGTCGGCGGTCAGCCCTCTCAGAACGGAGAACGATCGTGCGACTCGGGATCATCCGACTGCCAACGCTACCGACACGGAAGGGACCAAGGAACGAACGGAGGAAGTCGCGTTGGAGCGGGCACCGGTAACGCAGGGCTTATTGAGGGTAAAAAAAGAGGAGGAGCTGCAAGAGATACCGGGTTCTGGCGGCACTACGATACTAACGACGCCGGCGACGGATTCGGAAGGGACCAGGTCGGGGGTGTTATGCCGCGACGGGAACGCAACCGCGacgagcgtcgcgacgccgttTCTCCTTGGAAGACGCACGAGTCCGCCGCCGGAGGACTGGAAGCCACTCGACAAGTGTTACTTCTGTCTCGACGGCAAGCTACCCCACGACGACCAGCCGCCCCTTAGCCCGCAGAGCGACAGTAGCAGCAGCTCGCGATCGGCGGAGTCACCGATGTCGGTCCAGGTGGACCCGATGGCGGCGTCCGTGGTCGCCGCCGCCCTCAGCGGCACTTACCCCACCTTGCTGCCCCAATGGTGCTTACCGCCGAGGGAGGCGCCCCTCGTTGGGGTGCAGACCCATCAGGacagcggcgcggcggccgaTCAACCGCTCGATCTCTCGGCCAAACCCAGAAATTCTCAGGACAACAACATATCTCTACTGGAGCAACAGAAAATACCTCTGAGAATGCCGACAGGCATCGATCCCAAGACTATCCTCAACTCGTGTTACCGCGCGAAACCGCGAATGACCGGACCGGTTGTgaccgcggcggcggcggcggcggcggctgcggCAGGCGTCGGTGGTGTTCCAGTGGTGGGTGCCGGGGGCGGCAGGAGGACTTACACCGAGGAAGAGTTGCAGGCCGCCCTCAGGGACATCCAGAGCGGCAAGCTTGGCACGCGGAGGGCAGCGGTGATCTACGGGATACCGCGTAGCACTCTGCGCAACAAGGTCTACAAGCTCGCGATGGAACGCGAAAGGGACGCGTCCCTGACTAGCACCCATTCACACCCTCACGAGCCCGGCGCCCcagccaccaccaccaccaccatcaccaccaccaccaccaccaccactactactactacaACACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGACGAGTTTAACACACGGCAACTTGGTGTCCGCGAGGTTGCAAGATTCGAGGTGGACGACAAAGAATTATCCGGTGcggaagaggagaaggaagTCGAGAAGGCCCTGCTGAAGCCTCTACTCTCACTGGAGGATCTCGTAAGGTTTTCCGCGCTCGAGGGGACCGGTGGTGATTCCCTCAGGAACCTGCTACAACGGGGACACGAGACAGGAGCCGAATGGCCGGGACTGGAACATGCGAACATCGGTCCCTACATTCAAAAGATGTTGGCAGCCGCTGCACCATTAG
- Protein Sequence
- MGRRRWKQYQDTLYSGTRSSESQPHHRLYPARACRGIICRTIITYPRQSRTIYSCSSSSNRRIRADVDGEEDGDENDEETARGQNEAEKRLKLDEDADRSAVSPLRTENDRATRDHPTANATDTEGTKERTEEVALERAPVTQGLLRVKKEEELQEIPGSGGTTILTTPATDSEGTRSGVLCRDGNATATSVATPFLLGRRTSPPPEDWKPLDKCYFCLDGKLPHDDQPPLSPQSDSSSSSRSAESPMSVQVDPMAASVVAAALSGTYPTLLPQWCLPPREAPLVGVQTHQDSGAAADQPLDLSAKPRNSQDNNISLLEQQKIPLRMPTGIDPKTILNSCYRAKPRMTGPVVTAAAAAAAAAAGVGGVPVVGAGGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHPHEPGAPATTTTTITTTTTTTTTTTTTPNTTQNASATTPPPQVDEFNTRQLGVREVARFEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGTGGDSLRNLLQRGHETGAEWPGLEHANIGPYIQKMLAAAAPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00385189;
- 90% Identity
- -
- 80% Identity
- -