Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_901521435.1
Location
CABEGB010000706.1:90345-105669[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.9e-18 5.8e-15 55.6 0.1 1 45 459 504 459 504 0.96

Sequence Information

Coding Sequence
ATGGACTACCGAATGTCCGTTTCTCCTACCGAAAGTGGTCTGGAACGGGTAGCAGAGGAGTTGATGGGCCGTAGGAGATGGAAGCAATACCAGGACACCCTGTACAGCGGTACCCGCAGCAGCGAATCGCAGCCCCACCATCGGCTTTACCCGGCGTTGTCGTCGTCCTGCAACCCGATACCCGGGAACCCGGACCAGATTGGGCCGCAGCTGCATCACCCGGCACCCACGTCGTTGCCGTCGACGGTGTTGACGacagcgacgacgacgacgacgacgacgacgctcGCGAGCGGCGTGGTAAAACAGGAAAGCCTGCAGAGGCATCATCTGCAGAACCATCATCTACCCGCGTCAGTCCAGGACCATCTACAgctgcagcagcagcaacaacaggAGGATTCGCGCCGTCTGAGGCCGGGCGAAGTCAAGATCGAGGCCGACGGCGACGAGAACGACGAGGAAACGGGACGGGGCCAAAACGAGGCGGAGAAACGGCTCAAGCTCGACGAGGACGCCGACAGGTCAGCGGTCAGTCCGCTCAGAACGGAGAACGATCGTGCGACTCGGGATCATCCGACTGCCAACGCTACCGACACGGAAGGGACCAAGGAACAAACGGAGGAAATCGCGTTGGAGCGGGCACCGGTAACGCAGGGCTTATTGAGGGTAAAGAAAGAGGAGGAGCTGCAGGAGTTACCGGGTTCTGGCGGCGGCACTACGATACTAACGACGCCGGCGACGGATTCGGAAGGGACCAGGTCGGGGCTGTTATGCCGCGACGGGAACGCAACCGCGACGAGCGTCGCGACGCCGTTTCTCCTTGGAAGACGCACGAGTCCACCGCCGGAGGACTGGAAGCCACTCGACAAGTGTTACTTCTGTCTCGACGGCAAGCTACCCCACGACGACCAGCCGCCCCTTAGTCCGCAGAGCGACAGTAGCAGCAGCTCGCGATCAGCGGAGTCACCGATGTCGGTCCAGGTGGACCCGATGGCGGCGTCCGTCGTCGCCGCCGCCCTCAGCGGCACATACCCCACCTTGCTGCCCCAATGGTGCTTACCGCCGAGGGAGGCGCCCCTCGTTGGGGTGCAGACCCATCAGGACAGCGGCGCGGCGGCCGATCAACCGCTCGATCTCTCGGCCAAACCCAGAAATTCTCAGGACAACAACATATCTCTACTAGAGCAACAGAAAATACCTCTGAGAATGCCGACAGGCATCGATCCCAAGACTATCCTCAACTCGTGTTACCGCGCGAAACCGCGAATGACCGGACCGGTTGTGAccgcggcggcggcggcggcggcggcggctgCGGCAGGCGTCGGTGGTGTTCCAGTGGTGGGTGCCGGGGGCGGCAGGAGGACTTACACCGAGGAGGAGTTGCAGGCCGCTCTCAGGGACATCCAGAGCGGCAAGCTCGGCACGCGGAGGGCAGCGGTGATCTACGGGATACCGCGTAGCACTCTGCGCAACAAGGTCTACAAGCTCGCGATGGAACGCGAAAGGGACGCGTCCCTGACTAGCACCCATTCACACCCTCACGAGCCCGGCGCCCCagccaccaccaccaccaccatcaccaccaccaccaccaccaccactactactactactacaaCACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGACGAGGTGGACGATAAAGAATTATCCGGTGCGGAAGAGGAGAAGGAAGTCGAGAAGGCCCTGCTGAAGCCTCTGCTCTCATTGGAGGATCTCGTAAGGTTTTCCACGCTCGAGGGAACCGGTGGTGATTCCCTCAGGAATTTGCTACAACGAGGACACGAGACAGGAGCCGAATGGCAGGGACTGGAACACGCAACCATCGGTCCTTATATTCAAAAGATGTTAGCTGCCGCTGCACCATTAG
Protein Sequence
MDYRMSVSPTESGLERVAEELMGRRRWKQYQDTLYSGTRSSESQPHHRLYPALSSSCNPIPGNPDQIGPQLHHPAPTSLPSTVLTTATTTTTTTTLASGVVKQESLQRHHLQNHHLPASVQDHLQLQQQQQQEDSRRLRPGEVKIEADGDENDEETGRGQNEAEKRLKLDEDADRSAVSPLRTENDRATRDHPTANATDTEGTKEQTEEIALERAPVTQGLLRVKKEEELQELPGSGGGTTILTTPATDSEGTRSGLLCRDGNATATSVATPFLLGRRTSPPPEDWKPLDKCYFCLDGKLPHDDQPPLSPQSDSSSSSRSAESPMSVQVDPMAASVVAAALSGTYPTLLPQWCLPPREAPLVGVQTHQDSGAAADQPLDLSAKPRNSQDNNISLLEQQKIPLRMPTGIDPKTILNSCYRAKPRMTGPVVTAAAAAAAAAAAGVGGVPVVGAGGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHPHEPGAPATTTTTITTTTTTTTTTTTTTPNTTQNASATTPPPQVDEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSTLEGTGGDSLRNLLQRGHETGAEWQGLEHATIGPYIQKMLAAAAPL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
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