Tbic015961.1
Basic Information
- Insect
- Tetramorium bicarinatum
- Gene Symbol
- -
- Assembly
- GCA_011636605.1
- Location
- VBVP01000465.1:1-67500[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-07 0.008 16.0 0.2 29 130 38 138 14 148 0.65 2 2 1.6e-08 0.00043 20.2 0.6 343 382 241 279 227 292 0.83
Sequence Information
- Coding Sequence
- ATGTCGGTCCAGGCGGAGCAGGCGGCTGCGGGAGGTGGTCCTGATACGAGACACCATCATCACCACCACCATAACCACGCGCATCATCATGCTAACATACATGCCTCTCCGCCGAACGTTACCCTCTTCCGTGCCCCAGTCAGGgTGAATCCTGATCCAGAAATCCAGTCTAGGATGGGCAACTATTCGCTAGTGAGGCATCTACTCGCCGACAAGCCTAAACGCTTGATCGGCATCGATGGCGGCATCCCGCCGAGTCCGGCGCCCTCGCCAACGCCCTCCTCCCACAAATCAGTCACGGATAGCTCCAGCAGGAGCTGTTCCCCGTCCTCGGGACAGGAGTTCAAGAAACCCGGTGGGCTTCGGGGCACGAGCGCCGCGTCTTCCTCGTCGAGCGCGAGCCATCAGCAACGGGGCGGCTTCGTCAAACCCGCCGACGGCAAGCCGCCTTACGGCGGTCGGGGTGGCTACCCCGGTCAACCAGTCAAGCACGGCGGCGGCAGCAACGATCATCGCAGCTACGGTTTACTTCCAGCCAAGGGCCCGCCGCCGTCCCAGCCGCACCCCCCGCCCGTCCCCGTGGGGAACAACGGCGCGCTGCCGATCGGCAATTCCGGCGGAAGTGTCGGCAATCTTGGCAACAGCGGCGGCCTCGCGAGCCGCACTCAATTCGGCCGCAATTTGAAGCTCATCGAAGTTAACgGGTCTAACTCGCGACCATCGATCGATACTCCGGATGTAGAAAACATCCTGAAGGAAATGACCGTGCCACTACCATTGACGGCGATCGCACAGACACCACGGAAGGAGCACGAGTCCAAGTTTACCTTCAACCCCCATCTGGCGAAGTTGACGGAAGTCGCCCCGCCAGAGCCTGCGAAGCCACGTGAGTACCTTAAAGCTTTCTTTATCTCTTATCTTTTCTGTACAAACTTCTGCGTTGGAGAAGCCTACTGA
- Protein Sequence
- MSVQAEQAAAGGGPDTRHHHHHHHNHAHHHANIHASPPNVTLFRAPVRVNPDPEIQSRMGNYSLVRHLLADKPKRLIGIDGGIPPSPAPSPTPSSHKSVTDSSSRSCSPSSGQEFKKPGGLRGTSAASSSSSASHQQRGGFVKPADGKPPYGGRGGYPGQPVKHGGGSNDHRSYGLLPAKGPPPSQPHPPPVPVGNNGALPIGNSGGSVGNLGNSGGLASRTQFGRNLKLIEVNGSNSRPSIDTPDVENILKEMTVPLPLTAIAQTPRKEHESKFTFNPHLAKLTEVAPPEPAKPREYLKAFFISYLFCTNFCVGEAY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -