Tcly004808.1
Basic Information
- Insect
- Tetragonula clypearis
- Gene Symbol
- pnr
- Assembly
- GCA_010645135.1
- Location
- WIUT01013252.1:2114-5895[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.51 2.3e+03 -0.9 0.2 2 13 192 208 192 215 0.75 2 2 8.8e-17 3.9e-13 49.5 5.1 1 35 378 411 378 412 0.98
Sequence Information
- Coding Sequence
- aTGACACAATTGGGTTTTATTCAGGTAAAAGATGGGGATTCTTTGCCACCAATTATCTGTCACCGATGCGTGTACAAGTTGGATGTACTGCACAATTTTCGTGAAGTGTCACATAAATCTGACGTCATACTCAAACAGTACCTGGATTATGCCAAGCAGTTATCGTCACACGATGATCAGATGAAATCTTTCTCCACTGCCAAAGTAGCAGGTGTAAATCCTCTACAGTCATTTCTCCAATTGAACAAAACATTGTTCAATGAGGAGCCTAATTCTCCGGCCAGCATTAATCAAAACATTATACCTCAGACTCAAACACATCATTTGGAGTTGTGCACCAATGACATGCCTGAACATGATAATATTAAGTGTGGACCAGAAGATGACACGTGTTCAAATAGCTCTGATCCAGACAGATTAGAAATAGAAGATCGAGATGAGCAGGATACTGAGGGGGAAGAAAATGGTTATGACATGACTATTAacaagagaataaaattagaaacaaattatGAAGAATCAAAAACAAATACCCCTAATCGCAGTCCAGTAAATAGAATGGATACACCAGAAAGCAACTGTTCAGATACAAATATTGATcaagaaacaacaaaattgTGGCAAGCATTAGCAAACAACAGAAGTTTAGAGATTACCAGGACAAATggtgataaattaaataatggcTTTACTGGTGAAGCGACTAATTTACTGCGTTCCTTGATCAACAACAGACAAATCGGTATTACGCCGATTGATTCGGACAGAGCATCACCCCAGATTAGGTTTTATAGGGACACTCAAGGAACAACAATCGAACGTACTATACCCGATGGTTCTGTACTTGGCAATCGTACTAATATCTCCTGTATAGAAAATAAGgGTACATCTGTGGATAGCAATCCGTCGAGTCCTGCCAGTGTTGGTCGAAAAGAGACCAAAGGTCGCAGAAAACAAAGTTATCCTAGTAAAGCTCCAATGAGTCCAGATGTTAATTATCAACATGAATCTAGCGAAGAACAAGCACAAGATTTTACAGCATGGTCAAATAAGATAAAGGTGAAGGTAGAGGACCAGAAACAACAATTCGATCAACATAGCGGTAATATGACGAAAAAAGTAGATATGTCCTGTACAAATTGTGGCACCATGACCACAACTATTTGGAGAAGGAATATGAAGGGGGAAATGGTTTGCAACGCTTGTGGACTTTATTATAAACTTCACGGAGTAAATCGTCCAGTTACTATGAGAAGGGATACGATACATACACGCAGACGTAGACCGAAAGGCGAGAAACCAACAAGGCATAGAAaaaaaggtGATTCAATTTTGGCACCACAGTCAGAACAAATGGATGCAGAAAGTGCAGACATGTTAGCAGCACTTCGGCGACAAATTCAACCCCACTTAATGATGGCTGCACTAACGCCACCGCGTATACCTGGTGGTCATCCACCAGCCCCAACCGCTCAGCTCAATTACTCTCTTCCCTTACCTAGTTATATGATGCACCATGTGAAGACAGAAGGGCGAGAACAATGTCATTTATCtacagaaacagaagaaacagAGGAAGGAGATGCAGAGAATGTTTCAGACGTACCATTAAACTTAGTTGCGACATCGTTATCCGAAGAGGCACATTGA
- Protein Sequence
- MTQLGFIQVKDGDSLPPIICHRCVYKLDVLHNFREVSHKSDVILKQYLDYAKQLSSHDDQMKSFSTAKVAGVNPLQSFLQLNKTLFNEEPNSPASINQNIIPQTQTHHLELCTNDMPEHDNIKCGPEDDTCSNSSDPDRLEIEDRDEQDTEGEENGYDMTINKRIKLETNYEESKTNTPNRSPVNRMDTPESNCSDTNIDQETTKLWQALANNRSLEITRTNGDKLNNGFTGEATNLLRSLINNRQIGITPIDSDRASPQIRFYRDTQGTTIERTIPDGSVLGNRTNISCIENKGTSVDSNPSSPASVGRKETKGRRKQSYPSKAPMSPDVNYQHESSEEQAQDFTAWSNKIKVKVEDQKQQFDQHSGNMTKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKPTRHRKKGDSILAPQSEQMDAESADMLAALRRQIQPHLMMAALTPPRIPGGHPPAPTAQLNYSLPLPSYMMHHVKTEGREQCHLSTETEETEEGDAENVSDVPLNLVATSLSEEAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00118363;
- 90% Identity
- iTF_00862241;
- 80% Identity
- -