Basic Information

Gene Symbol
pnr
Assembly
GCA_951804975.1
Location
OX638126.1:8273093-8277915[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.8 1.1e+04 -1.2 0.2 2 13 230 246 230 253 0.75
2 2 2.8e-16 3.8e-12 48.2 5.6 1 35 486 519 486 520 0.98

Sequence Information

Coding Sequence
ATGTTCGATGTACCGCCCAAGTTCTACGAGCTGTGTCGCCTTTGTTTATCGTCGGACGGTGTCAAATTGTCCATATTCGAAGAGGAGGGCGCCCAGCGGAACTTCGCCGATAAGATACTAACGTGCCTCTCGATTACGGTAAAAGATGGAGATTCTTTACCACCAATCATTTGTCACCGGTGTGTGTACAAGTTGGATGTGCTACACAACTTCCGTGAAGTGTCACACAAATCTGATGTCATACTCAAACAGTACCTGGATTATGCCAAGCAGTTATCATCACACGATGATCAGAAGAAATCTTTCTCCACTGCCAAAGTAGCAGGCTTAAGCCCTCTACAGTCATTTCTCCAATTGAACAAAACACTGTTCAATGAGGAGCCTAACTCTCCGGCCAGCATTAATCAAAACGTTATACCTCAGACGCAAACACATCATTTGGAGTTGCGCGCCAATGACATGCCTGAGCATGATAACATTAAGTGTGAACCAGAGGATGATACATGTTCAAACAGTTCTGATCCAGACAGATTAGAAATAGAAGATCGAGATGAGCAGGATACAGAGGGGGAAGAAAATGGTTATGATATGACCATTAACAAGAGAATGAAAGTTGAAACAAATTATGAGGAATCAAAAACAAGTACCCCTAATCGCAGTCCAGTGAATAgaatggatacaccagaaagcaaTTGTTCAGATACAAATATTGATCAAGAAACAACAAAACTATGGCAAGCATTAGCAAACAACAGGAGTTTAGAGATTACCAGGACGAACGGTGACAAATTGAACAATGGATTTACTGGCGAGGCGACTAATCTGCTGCGTTCTTTAATCAACAACAGACAAATCGGTATTACTGCTGTCGATTCTGATAGAGTATCACCGCAAATTAGGTTTTATAGGGACACTCAAGGGACAACGATCGAACGTACTGTACCCGACTGTTCTGTACTGGGCAATCGCACTAATGTCCCGTGTATAGAAAACAAGcaTCATTATAAACAGCAGCAAAGGCTGACTCTTTTTCCGAAGCTAAACGCCACAGTCAGGAAAAATTCTAAGATTTATGGAAAAACGGAAAATCTTTACTTCCTTTTATGTCTCTACTCTTTTGACCCTGATCTCTGTGCAAATAAAAGTTCTTCCATGGGAAGTCCTTGCAGTTTGTTCAATGCAAATACCAGAAGAGAACTGCAGgGTACTTCTGTGGACAGTAATCCGTCTAGCCCCGCCAGTGTTGGTCGAAAAGAGACTAAGGGTCgtagaaaacaaagttatcctaGTAAAGCACCAATGAGTCCGGATGTTGTTAATTACCAGAACGAATCTAACGAGGAGCAAGCACAAGATTTCACGGCATggtcaaataaaatgaaattaaagGTAGAGGACCAAAAACCGCAGTTCGATCAGCATAGTGGTAATATGGCGAAAAAGGTAGACATGTCCTGCACAAATTGCGGCACCATGACCACAACTATTTGGAGAAGAAACATGAAGGGGGAAATGGTTTGTAACGCCTGTGGGCTCTATTACAAACTTCACAGAGTGAATCGTCCAGTTACCATGCGAAGGGATACCATACACACGCGTAGACGTAGACCCAAAGGCGAGAAACCGACAAGGCATCGAAaaAAAGGTGAGGCAATTTTGACACCACAGTCGGAACAAATGGACGCAGAAAGTGCAGATATGTTAGCGGCCCTTCGACGACAAATCCAACCCCATTTAATGATGGCGGCATTAACGCCACCACGTATACCTGGTGCCCATCCACCAGTCCCTACCGCTCAACTTAATTACTCCCTTCCCCTACCTAGTTACATGATGCACCATGTAAAAGCAGAGGGGCGAGAACAATGTCATTTATCTGCGGAGGCAGAGGAAACAGAGGAAGGAGATGCAGAGAATGTTTCGGACGTACCGTTGAACCTAGTTGCGACGTCGTTATCAGAAGAAGCACACTGA
Protein Sequence
MFDVPPKFYELCRLCLSSDGVKLSIFEEEGAQRNFADKILTCLSITVKDGDSLPPIICHRCVYKLDVLHNFREVSHKSDVILKQYLDYAKQLSSHDDQKKSFSTAKVAGLSPLQSFLQLNKTLFNEEPNSPASINQNVIPQTQTHHLELRANDMPEHDNIKCEPEDDTCSNSSDPDRLEIEDRDEQDTEGEENGYDMTINKRMKVETNYEESKTSTPNRSPVNRMDTPESNCSDTNIDQETTKLWQALANNRSLEITRTNGDKLNNGFTGEATNLLRSLINNRQIGITAVDSDRVSPQIRFYRDTQGTTIERTVPDCSVLGNRTNVPCIENKHHYKQQQRLTLFPKLNATVRKNSKIYGKTENLYFLLCLYSFDPDLCANKSSSMGSPCSLFNANTRRELQGTSVDSNPSSPASVGRKETKGRRKQSYPSKAPMSPDVVNYQNESNEEQAQDFTAWSNKMKLKVEDQKPQFDQHSGNMAKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHRVNRPVTMRRDTIHTRRRRPKGEKPTRHRKKGEAILTPQSEQMDAESADMLAALRRQIQPHLMMAALTPPRIPGAHPPVPTAQLNYSLPLPSYMMHHVKAEGREQCHLSAEAEETEEGDAENVSDVPLNLVATSLSEEAH