Tcly015080.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tetragonula clypearis
Gene Symbol
JARID2
Assembly
GCA_010645135.1
Location
WIUT01000039.1:59676-66468[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.7e-23 3e-19 70.0 0.0 6 89 1377 1458 1373 1458 0.94

Sequence Information

Coding Sequence
atggtgTTAAGtcgaaatgataaaagaaagagaaaagaaggagatCTGGTAGATCTTATGGAGCCACTTTCAGAATCTCCAAAAagGACAAAAGTGCATGCACAAAGAAAATTTGCACAAGGTGCAACGACAGTTTTCAATCCTTCACATACTCCTATTAAGGATAAAGAAAAGACTAAACCAGCAGTTATAACAGAATTAATAACTCATAAACGACCAAATACAGAAGATTTCCTGACATTTTTGTGCTTTAGAggAACATCAATTTTACCTCCAagcttaaatttttttaatgttgggagtaaaaaagagaaacctGATAATAAGCCAACACGTACAGTAACagataaaaatgtatcaaCTAGTATACctattgaaaatcaaaaatcagATTCAACTCAAAAAGCTATTACCAAAGTGAAACCTGTTATTACTGATAAGAAGAAAGTCCCAAATacaattcagaaaaatattacaacattCAAAAGTACTACGTCTACGGTACAAGctcttaaaaagaaatatcaagaaCAACGTCTTGCTAAACAaagaatcaaaaataaatttaaaacatctTGTGTTATGAGAACAAGATCTTGTACGGAacaaacattattaaaatctgTAAACAAATTAGCACCCAGAAAATTTTTGCCAAGAATTGAAAGTAAGAGACTTGGTTTACGAAGCAGTGTGCTTGcagataaaacgaaaaaagctTCAAAAGTTAAATCTGTAGCATCTAAAcctaagaagaaaattatagtaaaaCAAAAGAACAGCGATACATCAAATTCCGAATCTACAtctgaagaagaagaggaaggtCCTTCAGAAAAATCAACATCACAGATGAAACGTACAATTCAAAAGACTGTCCAGAAAAACATATGTACAAGAAGTAAATCTGAAATGAGGAGAATCACACGTTCTCATAGTGGCACAATTTCTCCAAAAAATCTTTGTAGAAGACCAACAAGAAAAACTAAAGAAGCAGCTGCAGTATACATGGAAATTCTTGGAAGAAAACTTGTAAGTCCAGatttagaaaatgataatatttctatGGACAGTTTTCCAGAATTACCAAATACACGTAAAACTACTCaaacagaaaatgaaattaaaattaaagtaaaacaaCCTGCTACAAAAGCAACTACTAAAAACAAAGATGGTAAAATTACTTCTATTCATGGTACATCCAATAAACGATTGGATAAAACAAAGgctaataaaattgattttaaaagtaaaagattaATAAGAGTTCACAAATATTGTGAAATTGATACTGATGAAGAGTCTGTAAGTTCTAATGAAACTAGTAACATAAGACCTGTTACAAGAAGAAGTTtaggaaaattaaacaaacctGTAAATCGATATCTTAGATCCTCTACTAAAAATGTAACTGCAAGAATGGagattcaaaataatataaatataaaatcaaaatctcAGGTtcaacataatataaaatttaataaagaaaaatttgtaatgaaGCGTAAACGAGAACAAAGTTCCAAGTCATTACTTGAAAAAGACAATGGATTaaagcaaaaagaaataaagaatactATTGCTGAAAATACAGATTCTGATGAAGAAACATTAGGAATGTTActcaataaattgaaaaagaagaaagatgaCAATGAACAAAAAGagattgttaataaaattagtgaTCACAATGTTGAAGATAAAACTGAACAATctgtgaatgaaaattttgtaaaaaccgatcttttaaaaatatcagatGACGAGGAATCTTTTCGGGGATTTACGAAAAAAGCAATATCCAAAGTATTAAATTCTTGCCAAACACATGTTAACGTTAATCTTTTGGCTACAAAAAAGACCAATGATAAATTAGAAACAGCTAAAATGGAAGATGAACAAAATACAGATGTAACTAAGCATGTAGATAAAGAATTGTCAAGTAATGAACCTTTACTAAGTATAAATTCTTCTTCAgttgtaaatatattagagAATCAACATCTTCAAAAATCTGAAAAGGATAAATCAGAGTTATCtgatgaaatagaaaaagaaatatcgacaAAAGACGTTAAAAACGAATGTCATcataaaactgaaatttcttcCACGAACGTGATAGATATGTCTTTATCAACGTTGCAtgtaagaaaggaaaaagtaaatatGTCGActgaacaaattgaaaaatggtTGACTGAAAGTTCGCTTGCTAAAGAAGAAAGCAAGttagaaatggaaaatgtaTCTACTTTTAAATACGAcgtatgtgaaaaaaaagctGACGTGTCacatttatcaatttcaacaaaaattcagCATTTGGTAAGGCCAGTCAATGTCACACTTTCTAAATTAGCAGAAAAGGCTAGTGTAAAAGATCGTGCgggtatatataataaatatgcacCTGTTATAGCAGGAGAATTACAGCCCGATATAAAACCACAGAATGAgttttctaattctaatactaatacttgtattaataaacaaagcacaaatttaaaagatattaacaaAGGACGAGTTATAAACTCAAATAAAGATTCATGTCCTGGAGAAGAAGGTGATAGTACGTTGAAATCAGATCAAAATTCGATAGATACTTCGAATGAGAAAAAGATACcaatagaaaagaaaactatatTTCAACCGAGGAAACCATTTTTACCAAAAGTTAAGGAACGTAAAACAGTAACTCCTAATGCAAATGCTTTTTCTCCAGAAAATGAAAGCAGTGTTTATGCATTCGAAAGTGACACTGAAATTCCTGTTAATACACCCTTTAGGCGTAAAGCCCGAGACTCCAATAATAAACCAAAcgtaattcataatttatccGAAACTGACGcggataaaattaaaaataatgcaaataaatctgagaacaatacaaataaattcgaCAATAACgcaaataaatctgaaaataacACAAACGCGAAtgaagcaaataaaaatatagaaagaacAATCGAagataattgtgaaataacaacgtcgaaagaaattcttaacaACAATTCTTCAAGGAACGAGagtgaaataatagaaataaaaaacatgtcaaattcaacattaaatgtgaataaatttgaattaccAAAAAATTTTGCTACTTTGGCTAATATACAAGTTCTACCATTAGATAAATTAACAACAACGTGGAGTAATGTAAATTGTAGTACTTCAATAGCTGTACAAGTAAATCTTGATGATAATGCACAAACGCAGAAACAAGTTGGAGAAGGAGATGTAAATCAACAGAAGAGTACAGAAATATCTACTCAAACTGAAAACAGCAATGAAAATGATGATGAAAATGATGGTCAACTATTTTATATACCTTTACAAGCTGTCACAAGAAATGGACCAAATTTAGTTCAGGGACAGCAATTAATTCAAGGTGTAGCTGTAAAGCTTGGCACTGAAGGACCAAATGGTCCTAATCAAAAAGTTCTTTTAAGAGCGAAATTGGTTACAAAACCTCCATCAACAATTGCACGTTGCCCTCCTGTAGGCACGGTACAGCCTACAACTCGTACACCACCTAATTCTACACTTATAACAACTGATCATTCAGTACCATCTACTTCTTCAAATACAGCATCAATTGTTACCACGTCTAATTTTGAACCTCAACCATCTACTCCaactaaaaatgaaaatatagcGCAAACtgcaaataaacaaaatataggGACTACATCAAATATAGGaactgaaaaattacaaaagtctCCGAAAACTtctagagaaagaaaaacctcAATTGACTCGAATAAGAATGGGAAAAGATGTCAGATCAAAGCAAAACAGAAATGTTCTGAAATTTCTCCTACTAATAACGTAACATTTCCAAGTgcaaaaagtgaaaatattgaagCACGATTAGTTGAGGCTCCAACATTTCATCCCACTGAGAAAGATTTTCAAGATCCTTTAGAATACATAGACAAAATAAGGCcaattgcagaaaaatttgGTATATGTAGAGTTGTACCACCACCTAATTTTAAAccGGAATGCAAAGTATCAGACGATATGCGGTTTACTGCTTACAATCAATATGTACATCGTATGTTACATAGATGGGGCCCtaatgtaaaagaaatgatggctataaaaaaatatttagctACACAAAGCATAACATTAACTCATCCGCCTTGGattgGTGGTATGGAAGTTGACCTGCCCCATTTATATCAAACAGTTCAAAGTTTAGGGGGATTAAAAGAagttattgaaaagaaaaaatggcaaaaagtaGCTGATGGAATGAAAATACCAAAATCTGCTCAAGACCGTGTAACCAAATTAGATGATATTTACTGCAAATATTTGTTACCATATGATACATTATCTCCAGGAGAACGAGGTAAATTGTTTGATGAAGTCGAATCTGAGtggataaaaagagaaaataaaatcttgctAAGGCAAAATGCGTCAATaagtgaaaatgaagatgATGAAGATGATGATAGCTCTGATGAAATCGAGGAATGCATTGTGAAAgGTAGAAACATGCCGTTAAATGCCTTTTATCGCATTGCACGTAATACACAACGTATGTGGTTTGGTGAAAATCAGCGATCTACAAACGAAACTGAAGGTGCTTCTGCTGATGAAGTTGAAAGTGCATTTTGGAAACACGTTGCTGAAAGAAAACGACATGTTTGTGTACACGCTGCAAGCATTGATTCAAGTGGGCGTGGGTTTGGATTTTCAGTTGCTAAAAATAGTCCATTCGCAAGACATCCATGGAATCTTAAAGTACTTACTAATAATGCTGGTTCAGTACTAAGAGCTTTAGGTCCCATAATggGTGTAACAGTACCAACACTTCATGTAGGTATGTTATTTAGTGCATGTTGTTGGTACCGTGATCCTCATGGTCTTCCTTGGATAGAATATTTACATACTGGTGCTAAAAAAATTTGGTATGGCATACCAGATGAGCACAACAATAACTTTAGAGAGGCTCTTTCAAAAATGGTTCCACGATATTGTAAGAATAAAACTATATGGCTACCTTCAGATACAGCGATGGTTCCGCCAGAATTATTAGTTGGTAATGGAGTATCACTATGTCAAACTGTTCAAGAACCAGGACagtttataattgtatttcctAAAGCATTTACATCAAGCATATGCACTGGTTATGTAGTATCTGAAAGTGTTTACTTTGCACAACCATCCTGGTTAGAAACTGCGGAACAAGTATTTAAAgATATACAAGATAGCTGTGAGCcatcaattttttcatttgaaagattattatttaatataattaatgactCTAGATCTCATATAGAAGTATTAAAACagattcttccaagtgtaattaaaatccgtgagaaagaaataagtTATCGTAAGCAATTAGAATCAATAGGTCTTACAAATACAGAAAGATTACCTTTGCCAGATagtggaaaacgaaaaaaagggaaaaaagtaaaagaagatGATGGCGACTTTGAATGCGAAATTTGCAGAGctaatttgtttgtttcattaatcAGTAATTCACAAGATGATAGTGTTTATTGTTTATCACATGCattgcaattatttaacagaaaaaaacaaaatttaaaacattatactctaatgtatacatataatgaGGAAGAATTAAATGATTTGATTCATAAACTAGAAGAAAGAATTGAAGCTAAATCTAAAAAGTCTAATCAAATCAAAcaaacaaagtaa
Protein Sequence
MVLSRNDKRKRKEGDLVDLMEPLSESPKRTKVHAQRKFAQGATTVFNPSHTPIKDKEKTKPAVITELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNVGSKKEKPDNKPTRTVTDKNVSTSIPIENQKSDSTQKAITKVKPVITDKKKVPNTIQKNITTFKSTTSTVQALKKKYQEQRLAKQRIKNKFKTSCVMRTRSCTEQTLLKSVNKLAPRKFLPRIESKRLGLRSSVLADKTKKASKVKSVASKPKKKIIVKQKNSDTSNSESTSEEEEEGPSEKSTSQMKRTIQKTVQKNICTRSKSEMRRITRSHSGTISPKNLCRRPTRKTKEAAAVYMEILGRKLVSPDLENDNISMDSFPELPNTRKTTQTENEIKIKVKQPATKATTKNKDGKITSIHGTSNKRLDKTKANKIDFKSKRLIRVHKYCEIDTDEESVSSNETSNIRPVTRRSLGKLNKPVNRYLRSSTKNVTARMEIQNNINIKSKSQVQHNIKFNKEKFVMKRKREQSSKSLLEKDNGLKQKEIKNTIAENTDSDEETLGMLLNKLKKKKDDNEQKEIVNKISDHNVEDKTEQSVNENFVKTDLLKISDDEESFRGFTKKAISKVLNSCQTHVNVNLLATKKTNDKLETAKMEDEQNTDVTKHVDKELSSNEPLLSINSSSVVNILENQHLQKSEKDKSELSDEIEKEISTKDVKNECHHKTEISSTNVIDMSLSTLHVRKEKVNMSTEQIEKWLTESSLAKEESKLEMENVSTFKYDVCEKKADVSHLSISTKIQHLVRPVNVTLSKLAEKASVKDRAGIYNKYAPVIAGELQPDIKPQNEFSNSNTNTCINKQSTNLKDINKGRVINSNKDSCPGEEGDSTLKSDQNSIDTSNEKKIPIEKKTIFQPRKPFLPKVKERKTVTPNANAFSPENESSVYAFESDTEIPVNTPFRRKARDSNNKPNVIHNLSETDADKIKNNANKSENNTNKFDNNANKSENNTNANEANKNIERTIEDNCEITTSKEILNNNSSRNESEIIEIKNMSNSTLNVNKFELPKNFATLANIQVLPLDKLTTTWSNVNCSTSIAVQVNLDDNAQTQKQVGEGDVNQQKSTEISTQTENSNENDDENDGQLFYIPLQAVTRNGPNLVQGQQLIQGVAVKLGTEGPNGPNQKVLLRAKLVTKPPSTIARCPPVGTVQPTTRTPPNSTLITTDHSVPSTSSNTASIVTTSNFEPQPSTPTKNENIAQTANKQNIGTTSNIGTEKLQKSPKTSRERKTSIDSNKNGKRCQIKAKQKCSEISPTNNVTFPSAKSENIEARLVEAPTFHPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPGERGKLFDEVESEWIKRENKILLRQNASISENEDDEDDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRSTNETEGASADEVESAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPIMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSKMVPRYCKNKTIWLPSDTAMVPPELLVGNGVSLCQTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDSRSHIEVLKQILPSVIKIREKEISYRKQLESIGLTNTERLPLPDSGKRKKGKKVKEDDGDFECEICRANLFVSLISNSQDDSVYCLSHALQLFNRKKQNLKHYTLMYTYNEEELNDLIHKLEERIEAKSKKSNQIKQTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01424161;
90% Identity
-
80% Identity
-