Tcar009473.1
Basic Information
- Insect
- Tetragonula carbonaria
- Gene Symbol
- Trerf1
- Assembly
- GCA_010645115.1
- Location
- WIUU01003963.1:5908-17339[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7 3.7e+03 -1.3 0.1 29 42 420 433 418 435 0.87 2 2 6.9e-12 9.4e-09 35.8 0.0 2 46 586 630 585 630 0.96
Sequence Information
- Coding Sequence
- ATGATGTTGTCTagaaaaataatcaaacgccAATCTGTTCAGTTTCAGACAGCGAGTCTGCTACAAGAACAGCCAGCCGAGCAATTGCAGGACATCACCCTAGAGGATCGATATCCATCTCAGCACACGGTGAACCCAGACCTGCAAGCACTGGTCAATTCCCCGTTACCGGACTCGCTAGCCGAGTTCAGTACCTACGGTGCCCAATATACGGAGAGCCCGCACACCTTGCCAACTCAGTCTCCGTTGTCATCGCCTTTGACGAGACACGACAGTCCAAGCTTCACATATCCAACGCCGCCAGCTAGCCAAGAGGGTCTCCTAACCGGAAACTTCCCCCTGTTGAGTCCACAGGAGGATCCAGAAAGCGTGAGACAGGTCTCGTCGCCTCTGTCAGCGGCTTTCTACGCGACCCCGATGTCCTCCGCGGCAGCGGTGGAGGAAGCTCTGAGCGAAGTATTGCCAGGCGAATCCGAGGCAGACGCCGACCTCTACGGATCCGGTTCGCCGAATCCGCACTCGCCACTGCCAAGCCCCTTGTCGGCGACTCCAGCACCATCGCCGCTGTCCTCGTTGCCACCGTCGTCGGTCTCGTCACCGGGACCAGTGTCGTTCACCGGCACTAGCTTCCCCGTGTCCCCGCATCACGCGCTCCAAAATCAAATGATGCCAAATTCGGAGGATCCGCTGCTCTCGTCCACACCCAAGGACTTCACGACAGCCAGTCGCAGACGGTTCGAGTTCCAATCGTACAAGTTCATCACCAGCCAGAACTTGGTCGACTTCGGACTGGGCAACGGTAGCCTGGCTGGCATCGTCGTGGACAACAACGGTGAGTTCAAGCTGATACAGACAGCTGGACTGCAAAAGACGAACGTGCTGGTGCAGACGGGCTCTCTGAGCCCGGCACTGACCTTCAAAAAGGAGATGCGGCTGGCCACACCGAAAGTGGAGCCTGTCACCGTGAACCTCGGCCTAAACGTGCAGACGAATCATCAGTACAACGCTGGCCAGTTCAATCAGCAGCAAGTGGTCAACCCGACCAAGTTTCTCATACAGACGAACGTGGCCAAGAGCAACAACATGAGACAGAAAACGATCAGTGGAAGCTTGCCCATCCCGGTGGAACAGATCAAGGAGGAGCTTCTCGACGAGGATGTTTTCCTCAATCCTAGCAACGTGCCGACTGGCAGCCCTGTCAGACAGTGCAGAAAGAGGCCTCGCATGGACGGTGGATTGTACGCAAACGCGTCCCACTCGTACCCGTCGAGATTGAGGAAGGCCTGTGACCGACATTGGGACAGTAGCTACACACCTCCGCCGATTTTGGACCCATCCAGACCTGGGCCAGGGCTGTACGCCAGGCTACATCAGTACGAGAGGGACTCTGACTTTAGCTCGGACGATTCGCAAGGGAACGACGGACCTCCGCCGAGAATCAACATCGGGACGAGGTACCAGGCAACGATACCGCCGATCGGCAGCGACGGAGATAGGGGAAAAGGCGAGCCCGAGGCTGATCATCTGCTCTGGGATCCTGGTATAAATAACTTGCTGACGGATAACGAACTGGAAATGTACCTACAATTTGCATGCTGCGCCGCGGTACCAGGTGGAGGAAGGAACAAAGAATACGCGCTTCATCTGCTGCACATGTGCAAAGGAAACATTCATGAAGCGATGCTGAAACTGATGAGACCAACGCCTCCGTTGCCGGCGGAACATCCGCTGCTGAGTTACGAGTGCCACGAATCTGACCGGTGGACGTCGCAGGAAATGGACGCATTCTATCAGGGCCTGTTGAAATACAACAAGGACTTCTCAGCGATCTCGCGAGACGTCGGTGGCAAGTCCGCGAAACAGTGCGTGCAATTCTATTACCTGTGGAAGAGGCTCTGCCCGGACGAGTACAGGCGACTGCGTGTTCGTCACGGTAAACCAAAGATTAAGACAGAGAGCAAGGATTGCAAGGACACTAGAGAGCTCCGCGACGCCATCGCGTCGGTCACTGAGATGGACTTCAGCGAGGACAAATCGATTCTTCATCGCACTCTGTTACAgacaaacgagagagagaactcgGCCACTCTAACTACCAGCGACGGAGAGCTGAGATTATTCGCATACGACTGCCCCGATAGCTTTAGCGGAAGTGTAACAGTAACGATGGCCGGGAGCACCCAAACCGCCCAAACCGGCAATACCGGCCACGCCACAGTCAACACCAACTCACAAACTCACACTAGTTCTGAGCAACAACTACCCGTGCCCACCCCACTTCACTACCCCTGCAAGATTTGCGGGAAAGTTTTCAACAAAGTGAAAAGCAGAAGCGCGCACATGAAATCCCACAGGCCGGTACCCTCGCCCGATTCAACGGGGCAGGAATCTAAGAGGCCCATCCAACAGCAATCGAAGGTGCAGCAATCTATACAATCCAaccaacagcagcagcagcagcaacagcaacaacagcaacagcaacaaccacaacaacaacaacaatcgcagcagcagcagcaacaacagcagtcAAACAGCGTTTCATCGCAGGTCCAAGACTTCAATCAGCAGCAATTGCCTCCGAACAATAGCGACACTGGCGCTCAAAATGCAGCGCATTTATGGCACAACCCGACGCGGCTCAGGCCACCATAG
- Protein Sequence
- MMLSRKIIKRQSVQFQTASLLQEQPAEQLQDITLEDRYPSQHTVNPDLQALVNSPLPDSLAEFSTYGAQYTESPHTLPTQSPLSSPLTRHDSPSFTYPTPPASQEGLLTGNFPLLSPQEDPESVRQVSSPLSAAFYATPMSSAAAVEEALSEVLPGESEADADLYGSGSPNPHSPLPSPLSATPAPSPLSSLPPSSVSSPGPVSFTGTSFPVSPHHALQNQMMPNSEDPLLSSTPKDFTTASRRRFEFQSYKFITSQNLVDFGLGNGSLAGIVVDNNGEFKLIQTAGLQKTNVLVQTGSLSPALTFKKEMRLATPKVEPVTVNLGLNVQTNHQYNAGQFNQQQVVNPTKFLIQTNVAKSNNMRQKTISGSLPIPVEQIKEELLDEDVFLNPSNVPTGSPVRQCRKRPRMDGGLYANASHSYPSRLRKACDRHWDSSYTPPPILDPSRPGPGLYARLHQYERDSDFSSDDSQGNDGPPPRINIGTRYQATIPPIGSDGDRGKGEPEADHLLWDPGINNLLTDNELEMYLQFACCAAVPGGGRNKEYALHLLHMCKGNIHEAMLKLMRPTPPLPAEHPLLSYECHESDRWTSQEMDAFYQGLLKYNKDFSAISRDVGGKSAKQCVQFYYLWKRLCPDEYRRLRVRHGKPKIKTESKDCKDTRELRDAIASVTEMDFSEDKSILHRTLLQTNERENSATLTTSDGELRLFAYDCPDSFSGSVTVTMAGSTQTAQTGNTGHATVNTNSQTHTSSEQQLPVPTPLHYPCKICGKVFNKVKSRSAHMKSHRPVPSPDSTGQESKRPIQQQSKVQQSIQSNQQQQQQQQQQQQQQQPQQQQQSQQQQQQQQSNSVSSQVQDFNQQQLPPNNSDTGAQNAAHLWHNPTRLRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01130753; iTF_01420211;
- 90% Identity
- iTF_00219045;
- 80% Identity
- -