Psmy006254.1
Basic Information
- Insect
- Pachycephus smyrnensis
- Gene Symbol
- Znf541
- Assembly
- GCA_030142225.1
- Location
- JARQST010000329.1:1286254-1293526[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-09 2.3e-06 27.8 0.0 2 46 565 609 564 609 0.96
Sequence Information
- Coding Sequence
- TTTCAGACAGCAAGTCTACTCCAGGAACAGACATCCGAGCAGCTTCAGGATATTTCTTTGGAGGACCGCTTTCCTAGCCAGCACACGGTCAATCCGGACCTACAAGCACTGGTGAATTCACCATTACCGGACTCATTGGCGGAGTTTAGCACTTATGGTGCACAGTATACCGAAAGTCCCCACACCTTGCCAACGCAGTCGCCATTGCCATCACCTTTGACTCGACATGACAGTCCAAGCTTTACCTATCCAACGCCTCCGGCTAGTCAGGAAGGTCTACTGACCGGAAGTTTGCCGCTCCTGAGTCCGCAAGAAGATCCGGAATCTGTTAGGCCCGTGTCGTCACCTTTATCAGCAGCATTCTACACCTCGACGATGTCATCTGCAGCTGCTGTGGAAGAAGCTTTAAGTGAAGTTCTACCTGGAGAAACGGAAGCGGATGCTGATCTCTATGGTGGCTCTCCTAATCCTCATTCGCCATTACCAAGTCCGTTGTCAGCGACTCCAGCACCATCTCCATTATCCTCTTTACCACCATCGTCTGTCTCTTCACCAGGTCCCGGAACTTTCTCGACCTCGAGCTTTCCTGTATCTCCTCATCACGCTTTACAGAATCAGATGATGCCTAATTCAGAAGATCCTCTCTTGTCTTCAAGCCCCAAGGACTTCACCGCAGGAcgtagaaaatttgaatttcaatccTACAAGCTGATTACCAGTCAAAACCTAGTTGACTTTGGACTCAATGGCAGCCTTGCTGGTATCGTTGTTGATAATAATGGAGAATTCAAACTCATCCAAACAGCTGGATTGCAGAAAGCTAACGTACTCGTTCAAGCCGGTTCTCTTAGTCCTGCTCTTACCTTCAGGAAAGAGATTCGCTTAGCCACGCCAAAAGTTGAACCTGGCACCATCAGTGTCACCACAACCGGCCTCAACGTTCAGACACAGTACCAACCGAATCAAGTTCATCAACAAGCCATCAACCCGGCCAAATTTCTTATACAGACTAGTAATGCCggtaaaaatactttgaagCACAAGACAGTCAGTAGTCTTCCGATCCCTATCGAACAGATAAAAGAAGAGCTTCTGGACGAGGATGTCTTTCTCAGTCCCACAAGCATCCCAGCTAGTCCTATAAGACAGTGCAGGAAAAGGCCAAGAATGGACGGCCATTATTCGCATTCTCATTCGTATCCTTCACGTCTAAGAAGAGCCTGTGACCGACACTGGGACAGTAGCTACACCCCTCCACCAATCCTAGATCCTTCTCGTCCTGGACCTGGTCTCTATGCGAGGCTACATCAATACGAGAGAGAATCAGAATTTAGTTCGGATGATTCCCAAGGGAACGACGGACCACCTCCGAGGATCAACATTGGCACCAGGTACCAGGCTACGATACCACCGGTTAGGTGCGATGGTGATCGAGGGAGAGGAGGTCCTGAGGTCGATCATCTTCTCTGGGATCCTGGCATAAACAACGTCCTCACCGACAACGAGTTGGAAATGTATCTGCAGTTCGCTTGCTGCGCTGCTGTACCCGGCGGTGGTAGAAACAAAGAATATGCACTTCACCTCTTGCACATGTGCAAAGGAAATATACACgAAGCTATGCTGAAATTAATGAGACCAACGCCGACCTTACCAGCAGAGCATCCATTGCTCAGCTACGAATGTCACGAGTCTGATCGTTGGACACCTCACGAAATGGACGTGTTTCATCAAGGCTTACTCAAGTACAACAAGGACTTCTCTGGGATATCCCAGGACGTGGGCACCAAGTCTGCGAAACAATGCGTGCAATTCTACTACCTCTGGAAGAGGCTCTGCCCGGACGAATACAAAAGGGTGAGGGCACGCCATGGAAAACGAAAGATCAAAAGCGAGAATAAAGATTGTAAGGACTCTAAAGACACTAAAGAACTTCGAGACGCCATTGCATCCGTCACTGAAATGGACTTCAGCGAGGAAAAGTCTATTCTCCATCGTACGCTGTTGCAGACAAACGAAAGAGAGAACTCCGCAACCCTGACCACCAGTGAAGGAGAATTAAGGTTATTTGCGTATGACTGTCCTGATAGCTTTAGCGGAAGTGTAACAGTAACGATGGCTGGGAGCACCCATACCGCCCAAGCCGTCAAAACCGGCCACGCCACAGTCAACACCAACTCACAAACTCACACTAGTTCTGAGCAACTACCCGTGTCCACCCCACTTCACTACCCCTGCAAGATTTGCGGGAAAGTTTTCAACAAAGTGAAAAGCAGAAGTGCGCACATGAAATCCCATCGGCCAATGCCCTCGCCCGATTCAACGGGACAGGAATCTAAGAGACCGACGCAACAGTCAAATGCActacaacagcagcagcagcagcagcagcaacaacaacagcaacagcaacaaagCAACACGTCGACGCAAGCGCAAGACTATCAGCAACAAATATCGACGACCAACAACGCCGATTCGAACGCGCACAACGCGACTCACTTATGGCACAATCCAACGAGACTCAGGCCACCATAG
- Protein Sequence
- FQTASLLQEQTSEQLQDISLEDRFPSQHTVNPDLQALVNSPLPDSLAEFSTYGAQYTESPHTLPTQSPLPSPLTRHDSPSFTYPTPPASQEGLLTGSLPLLSPQEDPESVRPVSSPLSAAFYTSTMSSAAAVEEALSEVLPGETEADADLYGGSPNPHSPLPSPLSATPAPSPLSSLPPSSVSSPGPGTFSTSSFPVSPHHALQNQMMPNSEDPLLSSSPKDFTAGRRKFEFQSYKLITSQNLVDFGLNGSLAGIVVDNNGEFKLIQTAGLQKANVLVQAGSLSPALTFRKEIRLATPKVEPGTISVTTTGLNVQTQYQPNQVHQQAINPAKFLIQTSNAGKNTLKHKTVSSLPIPIEQIKEELLDEDVFLSPTSIPASPIRQCRKRPRMDGHYSHSHSYPSRLRRACDRHWDSSYTPPPILDPSRPGPGLYARLHQYERESEFSSDDSQGNDGPPPRINIGTRYQATIPPVRCDGDRGRGGPEVDHLLWDPGINNVLTDNELEMYLQFACCAAVPGGGRNKEYALHLLHMCKGNIHEAMLKLMRPTPTLPAEHPLLSYECHESDRWTPHEMDVFHQGLLKYNKDFSGISQDVGTKSAKQCVQFYYLWKRLCPDEYKRVRARHGKRKIKSENKDCKDSKDTKELRDAIASVTEMDFSEEKSILHRTLLQTNERENSATLTTSEGELRLFAYDCPDSFSGSVTVTMAGSTHTAQAVKTGHATVNTNSQTHTSSEQLPVSTPLHYPCKICGKVFNKVKSRSAHMKSHRPMPSPDSTGQESKRPTQQSNALQQQQQQQQQQQQQQQQSNTSTQAQDYQQQISTTNNADSNAHNATHLWHNPTRLRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01418285;
- 90% Identity
- -
- 80% Identity
- -