Basic Information

Insect: Tetragonula carbonaria
Gene Symbol: lov
Assembly: GCA_010645115.1
Location: WIUU01009866.1:1022-4739[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.4e-18 4.1e-15 55.8 0.0 1 44 488 531 488 532 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.4e-18	4.1e-15	55.8	0.0	1	44	488	531	488	532	0.96

Sequence Information

Coding Sequence: atgaaacgtttgaaTTGCAGCCCATTCTTCGAAAGGATATTTGCGGAGCACCCCTGCAAACATCCGGTGATTGTGCTAAAGGACTATCCCGGTCACGAAATAGCGGCGCTGATCGACTTTATGTACCGTGGCGAGGTGAGAGTCGGCCGCGAGGAACTTCCAGGACTGATGAGAGCCGCGGAAAGTCTACAAGTGCGTGGATTAACCTCATCGGAACCGAGGCCAACGTCACCGCCGGAAACACCGACTGCCGATCTTCTCCTAGGCGAGCCGTCGACACCCGAAGGCGCCAGGCAAGAAACTCCGGAGGAGGATGACAACGCGTCGGAAAGCACGGCGCCGCCGTCCACGCGAGAACCAGCGCCGGTAACGACGCCCATTGTTTTTCATCCTGCGAGGGACCACCGTGATAGGTTACCGCATATGGGCCATTTGAACTTTGGAATACGTGAGTTGCGTGAGAGTTGTGGATCGCCTCTTCTACCTCGGCGAAAACAGGCACGCCCTCGAAGGAGATCCGGTGAGTTAGTACCGCAAGATCTTAGTCGGCATCATCCACCGCTGAGTCTTAGTCCGTTAGCCAGTGGTTTGAACCTGACCAGTAGTCATCAACAGccacaacagcaacaacagcatcCACACCAACAGTTGTCCACTTCGAGCTCACAGAATCAACAACAGCCGGAAGATATTGCGGAGAACCTTTCGATGAAAAGATGCTCGTCGCCGAGCGGAGCCGAACAGCACAACGTAAAAGCGGAGAGCAGCGAAGCGGCGAGTAGTCCAAGGGGATCACCGTTAACCGGGACAAGTCTGCTGCACCCCGACGGTTCCCTTCAAGATATTCCCTCTGCTGCGGCagcagcggcggcggcagcCGCGGTAGGTTTGCCAAACATGTCGGCTTTATCGCTAACGCCGCCGCATCATCATAGCGAGTACCTGACGAGTCTGGGCCAACTAGCGGCCCAGTGGTTACCGAATCATCCACAAAGCCAACTGCCACATTCATCTCAGGGTCATCATCCGCGGGATGGCAGTCCGCACGGACCTAGTAGAACGCATCCGTttcaacagcagcagcaacaacagcaacaacaaccacaacaacaacaacaacaacaacaagaaCCTCCGCTGACAGTGCGGCGAAGTTCCGTTACGACGATGTTCTCATTGGACGGTGTCGCATCTTTAGGCGGTGGACTGTTCCCTCATGCAGGTGCTCTCGAGAGAGGATCTCTTTTAGCGGATCTTCACGATAGCTTTAAACCGGAAACGCTGCACGGGCTTTTTGGTACGGCGGGTCTGAGCGGCCATCATTCGGGGAAAAAGCCAAAGAAACACAGAGGCGACGGTGACGCACCGCGCAGATGGGGAGACCACACTAGTCGGGGTTTGCCAGTAGGAAGGCCGAAAGGTCAGCACAGTGCACCCAGAGGTGGACCTCCTAGGTCTTGGACGAATGCGGAACTGACCGAAGCGCTGCAACACGTTTGGAACAAGAAAATGACCACGTCCCAAGCAAGCAGGATCTTCGGTATACCGTACAACAGTCTATTGATGTACGTGCGAGGGAAATACGGGAAAAGTTTGAAACTCGAGCAATTGAGAAGGGACTGCACGGGCGCGACGACGGGCGAAGTAGTAATGAATTCGCTGAACAACAACGTTAAGGCCGTCCAGCCGCCGACGCAAATGACCCATCCACTCGCCGGTCTACCACCGCATCCGGGCGACGACGGTGGATTTCCTCATCATTCGTTGCTCGGCGGTAATCTACCACAGGGTTTCTTTCCTGACTTTGCCGCAGCTGCGTTCCCAGTGCCGTGA
Protein Sequence: MKRLNCSPFFERIFAEHPCKHPVIVLKDYPGHEIAALIDFMYRGEVRVGREELPGLMRAAESLQVRGLTSSEPRPTSPPETPTADLLLGEPSTPEGARQETPEEDDNASESTAPPSTREPAPVTTPIVFHPARDHRDRLPHMGHLNFGIRELRESCGSPLLPRRKQARPRRRSGELVPQDLSRHHPPLSLSPLASGLNLTSSHQQPQQQQQHPHQQLSTSSSQNQQQPEDIAENLSMKRCSSPSGAEQHNVKAESSEAASSPRGSPLTGTSLLHPDGSLQDIPSAAAAAAAAAAVGLPNMSALSLTPPHHHSEYLTSLGQLAAQWLPNHPQSQLPHSSQGHHPRDGSPHGPSRTHPFQQQQQQQQQQPQQQQQQQQEPPLTVRRSSVTTMFSLDGVASLGGGLFPHAGALERGSLLADLHDSFKPETLHGLFGTAGLSGHHSGKKPKKHRGDGDAPRRWGDHTSRGLPVGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRRDCTGATTGEVVMNSLNNNVKAVQPPTQMTHPLAGLPPHPGDDGGFPHHSLLGGNLPQGFFPDFAAAAFPVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01539520;
90% Identity: iTF_01417621;
80% Identity: iTF_01418460;