Basic Information

Gene Symbol
ZFX
Assembly
GCA_036937485.2
Location
JAWNGG010000347.1:76542-80880[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 1.4 1.3e+02 3.7 0.1 3 23 24 44 23 44 0.94
2 15 3.5 3.4e+02 2.5 3.4 1 23 886 909 886 909 0.80
3 15 0.00055 0.053 14.4 2.1 3 23 993 1014 991 1014 0.96
4 15 0.011 1 10.4 0.6 2 23 1027 1048 1026 1048 0.97
5 15 1.7e-05 0.0016 19.2 3.1 2 23 1051 1072 1050 1072 0.97
6 15 0.014 1.3 10.0 0.3 1 23 1078 1100 1078 1100 0.95
7 15 2.7e-05 0.0027 18.5 4.5 2 23 1107 1128 1106 1129 0.95
8 15 0.12 12 7.0 3.7 5 23 1142 1160 1141 1160 0.97
9 15 2.5e-05 0.0024 18.7 1.5 3 23 1167 1188 1166 1188 0.97
10 15 0.02 1.9 9.5 0.3 2 23 1204 1224 1203 1224 0.97
11 15 7.4e-05 0.0072 17.2 0.7 1 20 1230 1249 1230 1252 0.92
12 15 0.00038 0.037 14.9 2.8 1 23 1260 1282 1260 1282 0.99
13 15 0.0026 0.25 12.3 3.2 1 23 1288 1310 1288 1310 0.97
14 15 4.7e-06 0.00045 20.9 3.9 1 23 1316 1338 1316 1338 0.99
15 15 0.0016 0.16 13.0 6.3 1 23 1344 1366 1344 1367 0.96

Sequence Information

Coding Sequence
ATGTATAAACAAAATACCTCAAACACAATGGATGCAACAAGCAATGGAGCTTCGGGTAGTGCAGTGGCTTGTCCAGTCTGTACCCTCTATTTACGCGAGGGTATCAGCCTACAAAGACATTTGGACACTCATCCAAAAGAACAAGTCATTGAAGCTCTTATCAAAGCTAGTACTAACTCCTCGAATGTGCAACAGACGCAGTTATCATCATCGGCACCTCCAGCATCACCGGCTATGCAATCACCCCAAAGTACACCTCAAGTTGCGCAGAATACTCACTTATCGGCTCAATCTCCATATCCTATAGGACCTATTTTCGAGTGTCCGCCTATTGGTACTGTGATGCCACCTCAATTTGCTTCATTTAGTTATCaacaatttgtaaataatggCACTATGATGATACCCCAATACGCAATGGCTCCGCAAGCTAATCAAATGATGCAAATGTTGTATAATCCATATAGTATGTATCAGCAGCAACAAATACCAACTGTTCAAATGATTTCACCAGTCACAGCCATACCTAATACAGCTAGAGTCAGGCCAGTGGTGACTATGGCtggtgaaacaaataatagaacTGCCATTGCTGTACCTGTAAATAATTCCGAGCCAAAACAAATTTTACCTGAGATTTTACCTGAATCTGAGCAAGAGTCTGAACAAGTGTTACCAGATATCAACCTTCCAGTTTCTCCTccattattaaatgaaaataattctatgcagcaaaatgaaagtgaaaatagTACAATTCAAATAGAACAAGAGGCAGAAGAAGCTCGTAGTTCAAGTACCCCAGAGCCACATACTGTGCAAAATGAATATGATAGCATTCCAAGATCATTGGCAATTACTTGTAATGTCAATATTACTACAGAGGATAAAGATGAGAGTGTATTGCCGGATATTGATGATGGAGAATCGTCATGTGTCGTTACTACAAACATACAATGTAAGTCTATTCATTATGAATCATCTGAAATGCAAGAATATATACACAGATATGAAGATgacgatgataataataaagttattatgTCTGAAGTATCACCAATGGTAACAGAAAATGTGACAGAAAAAACAACTACTGAAAAAGTTCCTCACAGAGAAGaaataagtgaaaatgaaGGTACCTCAGCAGAAATGCCCTTAGAAGATACAGTGAAAGCCCCAGCTCAGCCAGAAGTAGAACAATTAGAACGTCTTTTAATCACTATTATGgagaatgaatttaataatacacagAAAGAATCCAATTTTGAggatgataaaaagaaaagtcctTCTCCGGAAAGGGCCAAAAGTGTAATACATGAAACAACCACTAATAATCCCATTGAATATGAAAACACTTGTAAATCTGATATAAAAGTACAAGTTAATCAAACTTTGGAAATTGATATAgataatgatgaaaataaaacttctTGTCTTTCATaccattataaaaatagtttgtCTGCACCTGCATCGCCTGTTGTAGAAAGGAGACCACGTAGGACTTACTCTGTTCGTTCAGAGTTTAATTCAAGTGAACgtctcaatttttattcaattggTTTTGATACAAACACATTGCATGATGAGGAAGATGATGAAGATGAGAAAAATGAAGCAGAAGATAATTTTGACGAGGCAGACatggaaattgaagaaatactTAGTCCACATACTCCTTTCATTAAATATGGTGAGAATACAGATAATTTTAGATCTCATACTCCACTGTCTGCAAGTAGTGGTATTTCTGTATTAAGGGTTAGAAAGGATCTTAGTAAACCATGTTCACCTGCTTCGGTGCATTCATTTTGTCATATGGATACTAACGGTATAGATCATGATGAAGAAACTGACGTAGCAATGAATGAATCACCAGAAAAGGATCCTATCGATTGTTCTCTGGTTGAACAAGATGTAAAAGCTGATCAATCAGAACTTTCTTTATGcaaaaatgagaagaaaatgGAAGGAGATTCTGCATATCAATCTGGAATTAGTGACCACATGAGTTCATTTTCTACTATTCATTCACAACATTCTCAGCAATCAACATCAATGGAATCATATAATATACCaagtaaaagtaataattatgtaaatttatcagAATCTAGTGATGTTGCGAGTAACTCTGACTCAAAGAGTTTTCATTCATCTAAATCAATTATACAAAAGCAATCTGTGGAACTTCTTAGTTTAAATGAAGATGCCCATGCAGGTCcaatgaatatatttgaatttgatgGGCTTCAAATCTTAGTTCCTAGTACATTCATAAGTGATTCTTCACAAAAAGCAGTTAGTGGAACCAGCCAGCAATCTATGGCAAGTAGTGAAGGTGGAGTAGGTATAGATGAAGAagttaaaagtattaatatgAGAGCTGATGAAACTATGCCACCCAGAGGTGAACTATCAGAACAAGAAAGCAATGGCTATACAGAACAGTCTGCTTGGCAGCTATATGCTGGTCAAGAATCATCAAGAATGTCAACATCCTATGATTTAATGGCACGTGAAAGTTGGGAAGAATCTGATGGATCCGATAATGAAATTGCAGGCCCACTATTAGATAGCAGATCTTTAGCAACACATTTTACATCAAGTTTATTTTTAGATCGAGATAGAAAAACTCCTACAAAAAGAATGTTCAAATGTTATCATTGCCCTGAAGTGTTTGATTGTCCGAAAGAACGCCGGGTACATAGTACTACTGCGCACAAAGAAGCTGGCCCGAGTAGCAGTAGAGATTCTACAGAACAACCTGAAGTAAAGGATATTAAGTTACTGGATGGCCGTATGAATGtatttgaagatatttttgtacCAGGTTTACATGTTCAGCAAGTTTATCATCAGCAACCATTGTTGCATCAACTTCAACCACCACAATCATCCGATGTAATTACAAAAGTAGAAGCTgatcaaaaaattgaaacactaGTACTACCATCAAACATTGAAGTGATCTGCACTCTTTGTAATCAGAGATTTAGTAGTGAAAAATCATTGCAACTACACCATAGAAGAGTACATATTACAGAAACAACAAAACGAATTCGTGAGAGCACCAAGTGCCAGATATGTCATGAAGAATTCCCTTCAGTTCTTTTATTCAATGCCCATTTGAAAATACATCCATTAGAATGTAGTCAGTGtggaaagtatttttatagaaaacaaaatttcaaattacacaTGAAACGACATTTAGGAATTAAACCATTTCCATGTACTGTTTGTGACAAAgcatttttaacgaaacagaAATTAGATGAGCATACCAATGGTCATACTGGGAATGCACCTGTTAAGTGTAATCTTTGCAATGAAACGTTCCGtagatattcaaatttaacacAGCACAAAAATAGACATCATTTAAacataaagaagaaattgaaagattacATATGTCATTGTGGTGAGGTTTTTCATACAAAGAAAAAGTTAGCTTGGCATAAAGAAACACACGATGAGAAACCTAAAGCATGTACATACTGTAATGAAAGATTCATCCATATGGCCAGCTTGACTAGACACATGCGCCGAGCTCATAATAAAAGATTCGTTCCAGATGCTCAAAGAGAGAGCGAAAATGTTGAATGCCCTGTATGTAAGTGTATTTATTTACGATCTTCCTTAGCAGTGCATATGCGAGTTCATAATGGTGAAAGACCATATGAATGTCAAGTTTGCTCTAAAGCATTTAGTACTAAGTGGAACTTACAATTGCACAAATGGACTCACGCTGCCCGTAACACCAAACCTTTCAAGTGTAATCAGTGCAGTGGCGCGTTTTACCGGCATAGTGATTATACTGCTCATATGAATTCTCATAGAAACGTGCGTCCTTACACTTGTAACTATTGCGGAGCGCAATTcatacgaaaatataattgtttaaggCATGTAAAGGAACATGAGGAGAACAAAGCTTATACATGCGATGTTTGCAACAAAACGTTTCATAGATCATATTATCTGAAAGAACACTTGCGAGTACATTCGGGTGCCAGACCATATACATGTCATATTTGTGGAAAATCTAGCGGTACGAAATCCAATCATAACAAACATGTCAGAATTCATCATGCACGAGAACCTGTAAATACCGAAAATTAA
Protein Sequence
MYKQNTSNTMDATSNGASGSAVACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASTNSSNVQQTQLSSSAPPASPAMQSPQSTPQVAQNTHLSAQSPYPIGPIFECPPIGTVMPPQFASFSYQQFVNNGTMMIPQYAMAPQANQMMQMLYNPYSMYQQQQIPTVQMISPVTAIPNTARVRPVVTMAGETNNRTAIAVPVNNSEPKQILPEILPESEQESEQVLPDINLPVSPPLLNENNSMQQNESENSTIQIEQEAEEARSSSTPEPHTVQNEYDSIPRSLAITCNVNITTEDKDESVLPDIDDGESSCVVTTNIQCKSIHYESSEMQEYIHRYEDDDDNNKVIMSEVSPMVTENVTEKTTTEKVPHREEISENEGTSAEMPLEDTVKAPAQPEVEQLERLLITIMENEFNNTQKESNFEDDKKKSPSPERAKSVIHETTTNNPIEYENTCKSDIKVQVNQTLEIDIDNDENKTSCLSYHYKNSLSAPASPVVERRPRRTYSVRSEFNSSERLNFYSIGFDTNTLHDEEDDEDEKNEAEDNFDEADMEIEEILSPHTPFIKYGENTDNFRSHTPLSASSGISVLRVRKDLSKPCSPASVHSFCHMDTNGIDHDEETDVAMNESPEKDPIDCSLVEQDVKADQSELSLCKNEKKMEGDSAYQSGISDHMSSFSTIHSQHSQQSTSMESYNIPSKSNNYVNLSESSDVASNSDSKSFHSSKSIIQKQSVELLSLNEDAHAGPMNIFEFDGLQILVPSTFISDSSQKAVSGTSQQSMASSEGGVGIDEEVKSINMRADETMPPRGELSEQESNGYTEQSAWQLYAGQESSRMSTSYDLMARESWEESDGSDNEIAGPLLDSRSLATHFTSSLFLDRDRKTPTKRMFKCYHCPEVFDCPKERRVHSTTAHKEAGPSSSRDSTEQPEVKDIKLLDGRMNVFEDIFVPGLHVQQVYHQQPLLHQLQPPQSSDVITKVEADQKIETLVLPSNIEVICTLCNQRFSSEKSLQLHHRRVHITETTKRIRESTKCQICHEEFPSVLLFNAHLKIHPLECSQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNKRFVPDAQRESENVECPVCKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARNTKPFKCNQCSGAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSGTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00962003;
90% Identity
iTF_00215196;
80% Identity
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