Basic Information

Insect: Tetragonisca angustula
Gene Symbol: -
Assembly: GCA_036937485.2
Location: JAWNGG010000129.1:374658-376921[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.8e-05 0.0018 19.1 0.8 3 23 242 263 240 263 0.95

2 10 0.00065 0.063 14.2 0.9 1 23 267 289 267 289 0.98

3 10 0.0031 0.3 12.1 1.9 1 23 295 318 295 318 0.97

4 10 0.00016 0.015 16.1 0.7 1 23 325 348 325 348 0.95

5 10 2e-05 0.0019 19.0 0.4 1 23 382 405 382 405 0.97

6 10 1.8 1.8e+02 3.4 0.2 5 16 419 430 418 432 0.87

7 10 1.5e-05 0.0014 19.4 0.3 2 23 444 465 443 465 0.96

8 10 2.2e-05 0.0021 18.8 3.4 1 23 469 491 469 491 0.96

9 10 2.4e-06 0.00023 21.9 1.9 1 23 497 519 497 519 0.98

10 10 2.6e-06 0.00025 21.8 0.6 1 23 525 547 525 547 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.8e-05	0.0018	19.1	0.8	3	23	242	263	240	263	0.95
2	10	0.00065	0.063	14.2	0.9	1	23	267	289	267	289	0.98
3	10	0.0031	0.3	12.1	1.9	1	23	295	318	295	318	0.97
4	10	0.00016	0.015	16.1	0.7	1	23	325	348	325	348	0.95
5	10	2e-05	0.0019	19.0	0.4	1	23	382	405	382	405	0.97
6	10	1.8	1.8e+02	3.4	0.2	5	16	419	430	418	432	0.87
7	10	1.5e-05	0.0014	19.4	0.3	2	23	444	465	443	465	0.96
8	10	2.2e-05	0.0021	18.8	3.4	1	23	469	491	469	491	0.96
9	10	2.4e-06	0.00023	21.9	1.9	1	23	497	519	497	519	0.98
10	10	2.6e-06	0.00025	21.8	0.6	1	23	525	547	525	547	0.99

Sequence Information

Coding Sequence: ATGGTCGCGGAGGGAGCAGTGCAAATACACGGCGGTATAAATCGTTCGGAAGCTGTGAAAATTTTACCGATGAGGTCTTCTACGATCGCAGAAACGTCCCTGGGCCAGGGTAAAAATGATCGAGCGCAGTTCCAAGTTACTGTTCCAGCTTCCAGTCGAACGATAGGCGAATCGATACCCTGGAAGATTGAGATAAAACAGGACCAGGATGACGAGAGGATGACGGCTAGAGACGACGAGGATGAAGTGAACAACAATGATTCCTCTTTGGGAGAAGAAGTAGCAGAGAATTCAACCGTAGATATGGTGAAGACTGTTTTGGTGCCTGTCAGAGACCCAGTGACGAAGGAAATTAGAAATGTGTTGGTGCCCGTTGAAGAGATGGACGATACCGGATTAAACGTCATCAAAAGTGTACTGATTCCCTTGCAGGAGGAGGACGGATCGATTTCTTACGAAATTAAGAAAGTCGTAGTGCCCATCAATCCGAAGTTGAGCTTTTCACCGAGGAAGAAACCCGAAGCTAAGTTGTCGACGAGTAAAGCGAAAGGTACGCAAgtgaattgtaagaaagaagaggagaaaggaaCTGAAGGGGAAGAAAAGGTATCGTTCGATGCCTTTGAAGAAGCTaggaaacaagaagaaaaagagggaaagcaaagggaaacgaagggaatagagagagaggtggATCAGATATTGGAAACCTTGAGAGACATTTGTCCATTCTGTCAGAAGCGTTTCAAGGACGAAGACCAGATGCAGAAGCACATTCTGAAAACGCACAGGAAACCCTACAATTGCGACAAGTGTCGCAGAGGGTACTCCTCCGACTTCGCTCTGGAGGAACATCAGAAAACGCACGAGGTGGTCTCGTTTTATCAGTGTTCCACTTGCCAGATGCAGTACAAGACGACGACTGGGTTGAAGTATCATCAGATCCGCGAGCACAGCGACATGGACCCGATGTTCACGTGCGACTACTGCGGCAAGCGGTTCAAATTGAAGCTGGACCTGGGCCTTCACATCGACAGGTCTCACATGAACGTCACTCACATTTGCAGATTCTGCGGCATGGCCGTGAAGAATATCGCGTACCACGAGCTGAAACACGAGAAACATAAGAAAGCCAGTTCCCTCTATCGTTGCAGTGTCTGCCCCAGAAGATTCAAAGCGTGGAACAGTTTGGAGAACCATTTGCTAATGAAACACAAATCGACCGGCGATGGATCGCCGGATATGTTGAGGACGCTctgcgaaaagaaatttcggtCGAGGAGTGACTTTTACCAGCAGGTGCTCAGTCAGTCGGTGGCCAAGCAAAATAAATGCGTCGTGTGCGGCAAGACCTTCGCCTTTGAGTACAATCTTCGCAATCACGTGGCCTCGCACTCGCAGACGTACCTGTGCTGCCAGTGTGGCAAGAATTTCGCCACGAATTATCTGTTGAAGCTGCACCTGCGGAAACACACCGGCGAACGGCCGTATCAGTGCAAAACGTGTCTGAAGACGTTCACCAGGTCAGACTCGCTTAGGATACACAGATTGATTCACACCGGTGAGAGGCCGTACGTGTGTGATCTGTGTGGTCAAAGTTTCACTCAGAGAGGGAGCATGATGATACATCGTCGCAAGCATCCCGGAGATCAACcgccgcctcctcctcctctgaTACTCAGCAGGCTCGAGAACAACGAGCATTAA
Protein Sequence: MVAEGAVQIHGGINRSEAVKILPMRSSTIAETSLGQGKNDRAQFQVTVPASSRTIGESIPWKIEIKQDQDDERMTARDDEDEVNNNDSSLGEEVAENSTVDMVKTVLVPVRDPVTKEIRNVLVPVEEMDDTGLNVIKSVLIPLQEEDGSISYEIKKVVVPINPKLSFSPRKKPEAKLSTSKAKGTQVNCKKEEEKGTEGEEKVSFDAFEEARKQEEKEGKQRETKGIEREVDQILETLRDICPFCQKRFKDEDQMQKHILKTHRKPYNCDKCRRGYSSDFALEEHQKTHEVVSFYQCSTCQMQYKTTTGLKYHQIREHSDMDPMFTCDYCGKRFKLKLDLGLHIDRSHMNVTHICRFCGMAVKNIAYHELKHEKHKKASSLYRCSVCPRRFKAWNSLENHLLMKHKSTGDGSPDMLRTLCEKKFRSRSDFYQQVLSQSVAKQNKCVVCGKTFAFEYNLRNHVASHSQTYLCCQCGKNFATNYLLKLHLRKHTGERPYQCKTCLKTFTRSDSLRIHRLIHTGERPYVCDLCGQSFTQRGSMMIHRRKHPGDQPPPPPPLILSRLENNEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01420445;
90% Identity: -
80% Identity: -