Basic Information

Insect: Tetragonisca angustula
Gene Symbol: GZF1
Assembly: GCA_036937485.2
Location: JAWNGG010000129.1:361686-368472[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.18 17 6.5 6.7 1 23 83 105 83 105 0.97

2 25 5.7e-06 0.00055 20.7 2.1 1 23 111 133 111 133 0.98

3 25 0.12 11 7.1 1.9 1 23 140 163 140 163 0.94

4 25 4.8e-06 0.00047 20.9 1.3 1 23 169 191 169 191 0.97

5 25 1.3 1.2e+02 3.8 3.9 2 20 197 215 196 219 0.82

6 25 3.3e-05 0.0032 18.3 2.0 1 23 226 248 226 248 0.97

7 25 2.5e-07 2.4e-05 25.0 1.0 1 23 252 274 252 274 0.99

8 25 0.044 4.3 8.4 1.1 1 23 280 302 280 302 0.94

9 25 6.8e-06 0.00066 20.4 0.6 1 23 308 330 308 330 0.99

10 25 7.7e-06 0.00075 20.3 3.6 3 23 476 496 475 496 0.97

11 25 0.0033 0.32 12.0 2.7 2 23 502 523 501 523 0.97

12 25 0.011 1.1 10.3 1.7 1 23 530 553 530 553 0.97

13 25 4e-05 0.0039 18.0 1.4 1 23 559 582 559 582 0.93

14 25 0.058 5.7 8.1 4.2 2 20 588 606 587 607 0.92

15 25 9.4e-07 9.1e-05 23.1 2.3 1 23 644 666 644 666 0.98

16 25 0.00031 0.03 15.2 0.4 1 23 670 692 670 692 0.96

17 25 0.00052 0.051 14.5 1.0 1 23 818 841 818 841 0.96

18 25 0.0034 0.33 11.9 4.4 1 23 847 869 847 869 0.98

19 25 0.016 1.5 9.9 6.2 1 23 878 901 878 901 0.94

20 25 0.0042 0.41 11.6 1.2 1 23 907 929 907 929 0.91

21 25 2.2e-05 0.0021 18.8 2.6 1 23 934 957 934 957 0.96

22 25 0.0032 0.31 12.0 0.7 1 23 963 985 963 985 0.98

23 25 1.3e-06 0.00013 22.7 0.6 1 23 989 1011 989 1011 0.98

24 25 0.0039 0.38 11.8 4.8 1 23 1017 1039 1017 1039 0.98

25 25 0.00054 0.053 14.4 5.2 1 23 1045 1067 1045 1067 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.18	17	6.5	6.7	1	23	83	105	83	105	0.97
2	25	5.7e-06	0.00055	20.7	2.1	1	23	111	133	111	133	0.98
3	25	0.12	11	7.1	1.9	1	23	140	163	140	163	0.94
4	25	4.8e-06	0.00047	20.9	1.3	1	23	169	191	169	191	0.97
5	25	1.3	1.2e+02	3.8	3.9	2	20	197	215	196	219	0.82
6	25	3.3e-05	0.0032	18.3	2.0	1	23	226	248	226	248	0.97
7	25	2.5e-07	2.4e-05	25.0	1.0	1	23	252	274	252	274	0.99
8	25	0.044	4.3	8.4	1.1	1	23	280	302	280	302	0.94
9	25	6.8e-06	0.00066	20.4	0.6	1	23	308	330	308	330	0.99
10	25	7.7e-06	0.00075	20.3	3.6	3	23	476	496	475	496	0.97
11	25	0.0033	0.32	12.0	2.7	2	23	502	523	501	523	0.97
12	25	0.011	1.1	10.3	1.7	1	23	530	553	530	553	0.97
13	25	4e-05	0.0039	18.0	1.4	1	23	559	582	559	582	0.93
14	25	0.058	5.7	8.1	4.2	2	20	588	606	587	607	0.92
15	25	9.4e-07	9.1e-05	23.1	2.3	1	23	644	666	644	666	0.98
16	25	0.00031	0.03	15.2	0.4	1	23	670	692	670	692	0.96
17	25	0.00052	0.051	14.5	1.0	1	23	818	841	818	841	0.96
18	25	0.0034	0.33	11.9	4.4	1	23	847	869	847	869	0.98
19	25	0.016	1.5	9.9	6.2	1	23	878	901	878	901	0.94
20	25	0.0042	0.41	11.6	1.2	1	23	907	929	907	929	0.91
21	25	2.2e-05	0.0021	18.8	2.6	1	23	934	957	934	957	0.96
22	25	0.0032	0.31	12.0	0.7	1	23	963	985	963	985	0.98
23	25	1.3e-06	0.00013	22.7	0.6	1	23	989	1011	989	1011	0.98
24	25	0.0039	0.38	11.8	4.8	1	23	1017	1039	1017	1039	0.98
25	25	0.00054	0.053	14.4	5.2	1	23	1045	1067	1045	1067	0.97

Sequence Information

Coding Sequence: ATGTTCATGATGAAGGAACCGCCACCGGGTTCCGCcgaagaaacgaacgttcaGCCACCTTTGAAAGAAGACGGCGTTCAGCCGTCGACGAAGGCGAACCAGACGGACGATAAGGTGAAGGACAGCTCGAGCAGTAGCGAAGATCCCTCCGAAGATCTCGACGACGCTCCGTTGGACTTCCGAAAGAAGCAGGAACGAGAGAAGAACAAATCGACGAAGCAGACGAATCATCCGAAGAAGAAGGTGCACACCTGCGAGATTTGTTACGCGACGTTCGATCGCAAGAGCAAGCACACGCGACACATGTTCAAGCACAGCAACTCGAGGCCTCACAAGTGTCCGGTTTGCGCGAAGGGGTTCAAGACCACTGCTCACCTAACCAGGCACATGGAGGTGCACGACGAGCCGGTCAACCTGCACGCGTGCAGCCTCTGCGACTTCAAGGCGCGCACCAAGCCTTACCTAAAGATCCACTACATCAGGAAACACACGGAGGACTACAATTACAAGTGCGAGCAGTGCGGGAAGATGTTCAAGGTGCAGTCGGATTACACGACTCACGTGAAGGACCACGACACCGAGTCGTGCGTGTGCGACATCTGCGGCTCGTCTTACCCGAGCAAGAGCTCGCTGTACTTTCACAAGCATTACAAGCACAAGACGAAGGTGAAGAAGTTCCCCTGTCTCACGTGCAAGAAGAAGTTCAAGACGCAGAAGAACTTGGACAATCACATGGAACTGCACAAGATCAAGTACGTTTGCGAGCAGTGTGGCATGGAGTTCAAAACGAAATACGGCTTGACCAAACACCTGAGGACTCACTCCGGCGAGAAGTCTTACCTGTGCGCGATCTGCGGGAAAACGTTCGGCTGCCTCAGCTCCCAGAAGATTCATCTGTTGACGCACGTCGGCGAAAGGCCGTACGTATGCGACATTTGCGGCCAGAGTTTCACGCAGAGGTCGCCGATGATGCTGCACCGCAGGAAGCATCCCGGTGTGCatccgccgccaccgccgatCAAAATAACCAACCTGTTGCACGGTGTGCAGGACAAAATAATCGTGAACAAGAGCGGCAAGCGCGATCCGCTCGAGCAAACGTACCTCGTGGTGCAAAACGTTGACAAATATTTCCTGCTACCCGTGGATCACAAAGAGTTAATAGAAAAACCCGGCGGAAGGTTATCCATCGGAGGGGGCGGCATGGTCATCAAGTCGGAGGAACACGACATACCGGAAGAGACGTCTGAACAATTAATCGAACCAGCCGAATCAGAGAGACCTCAGACTGACGAAACTCCGCAATCACGTACTGACGTGCCTGTTGAAATGCCTCTGCAATTGTCACAGTGGTTCGAGCAAGGTTCGAACAGTTCCGGAAGCATTCCAGCATCGTCCGCCGGCAACAAGAAGACGTCCAACTGCTGCGACTACTGTTCCAGGGTCTTTCGAAGGAAGTACGAACTGAAGAGACATTTGGCGACTCACAGTAACACACGGGTCGAGTGTTCGGTGTGCCATCAGTTCTTGAAAACGAAGAGGACGCTGAACCTTCACATGAAGCTGCACGAGGAGAGCGACAAGATGTTCGAGTGCTCGGAGTGCGATTTCAGGTCGAAGCGGATGCCCAGTATGAAACGCCACCAGATCAGGAAGCACTCGATGCACGCCAATTTCAAATGCGACATATGCTCGAGGGTGTTCAAGTTGAACAGCGATCTGACGAGGCACAATCAGCTGAAGCACCTGATCGAGCCGTGTTGCTGCGACATCTGCGGAAGGACGTATCGGAACATGTTCTTCCTTCGGAAGCACTGGTACCTGGCCAAGAAGCGGAAGAAGTCTTGCGATCGTATGCGTTGGAGAGGAATCAGGAGCCGGAACGTGGACTATGCGACAGCGCAGAAGAAGGCCGAGTCGAGCCAAGTGTATAATTGTCCCAAGTGCAAGTGGCGATTCAAGAACAAAAGTTTGCTAGACAGGCACATGCAACGACATTTGCTCAGCTTTAACTGCGAGACTTGCGGAGCTGTGTTTAAGTATAGGGCTTCGTTCTTGAAGCATCAGGAAGCGCACAAAAACGAACAAGAGAAACCAACGCAGCGTTTAACGCCGAAGAACAAAGCCACCGCTGCCAATCGAACGAAAGGCGAATTAAAAGCATCCCGCGAACCTTCTTCGGGCATTCTTCAAAGACGAGTCGCGTTTCGCGGCTCGGAGAACCACAGACGCAGAAGCGGCCGACTTTTGAGCAACTCGAAAGCCAGTCGGAACAACGAGACGAAAGGCGTAAATTCCAAGCATAAAACAGTAAACGACGAAGAGAGGAGTTCGTCGAAAAATTCTACAAGCAAGAAATTGTCACTGACCGCCACCAGCTGCCCGAACGAGACCAGGCAAGAATCTAACGACGAACAGGAAGATCTGTACAAGAAGCTGCACGACGGCAGTTATACCTGCGACATTTGTCAGACGACGTTCGAACAGAAGAGGAAGATTCTCCGTCACATCGCCAGCAAGCACAGCTTTCATCGGCCGTTCAAATGCTCCACGTGCGACAAGACGTTTCTGTACAAGTGCGACTTGAAGGCTCATCGTTCGATCCACCAGGACGTCGACACGAGTTTGCTGCACTGCTGCGACAAGTGCGGCTACCGGACGAAGGCGAAGAGCAACCTCAAGTCCCATTACATCAGACGGCACACGGACGACTACAGATTCGCATGCGAGCACTGCGGCAAGCGTTTCAAGATGGAGTGGGACCTGAAGTTCCACGTCGGGACTCACGGCAGCTCGCAGCACATGTGCGATATATGCGGCAAGTTCTACACGAGCAACTACTCACTGTACAAGCACCGAAAGGTGGTGCACTTGAACGAGTACAAGTTCCAGTGCGGCGTTTGCAACAAGCGGCTGTTGACGCAGGAGAACCTGGACAGCCACATGAAACAGCACAGCCGTACGTACGAGTGCACAGAGTGCGGGAAGGTGTTCGCCTCGAAGAGGTACCTGGCCACTCACACGACCACGCACACGGGCGTAAAACCGTACGCCTGTCACGTTTGCGAGAAGAACTTTCGTACGTCGCACATGAAGAACATGCATCTGTTGACGCATTCGGCGGAGAGGCCGCACGTCTGCGACCTCTGTGGACATTCCTTCAAGAGGAGGACGTACATGATCGAGCACAGGAGGAAACATCCCGACGCTCATTTGTCCTCGCCACCCGTGCCACTTGGCAGGAAGAGCGTCAGCGAGCTGACGGTGTGA
Protein Sequence: MFMMKEPPPGSAEETNVQPPLKEDGVQPSTKANQTDDKVKDSSSSSEDPSEDLDDAPLDFRKKQEREKNKSTKQTNHPKKKVHTCEICYATFDRKSKHTRHMFKHSNSRPHKCPVCAKGFKTTAHLTRHMEVHDEPVNLHACSLCDFKARTKPYLKIHYIRKHTEDYNYKCEQCGKMFKVQSDYTTHVKDHDTESCVCDICGSSYPSKSSLYFHKHYKHKTKVKKFPCLTCKKKFKTQKNLDNHMELHKIKYVCEQCGMEFKTKYGLTKHLRTHSGEKSYLCAICGKTFGCLSSQKIHLLTHVGERPYVCDICGQSFTQRSPMMLHRRKHPGVHPPPPPIKITNLLHGVQDKIIVNKSGKRDPLEQTYLVVQNVDKYFLLPVDHKELIEKPGGRLSIGGGGMVIKSEEHDIPEETSEQLIEPAESERPQTDETPQSRTDVPVEMPLQLSQWFEQGSNSSGSIPASSAGNKKTSNCCDYCSRVFRRKYELKRHLATHSNTRVECSVCHQFLKTKRTLNLHMKLHEESDKMFECSECDFRSKRMPSMKRHQIRKHSMHANFKCDICSRVFKLNSDLTRHNQLKHLIEPCCCDICGRTYRNMFFLRKHWYLAKKRKKSCDRMRWRGIRSRNVDYATAQKKAESSQVYNCPKCKWRFKNKSLLDRHMQRHLLSFNCETCGAVFKYRASFLKHQEAHKNEQEKPTQRLTPKNKATAANRTKGELKASREPSSGILQRRVAFRGSENHRRRSGRLLSNSKASRNNETKGVNSKHKTVNDEERSSSKNSTSKKLSLTATSCPNETRQESNDEQEDLYKKLHDGSYTCDICQTTFEQKRKILRHIASKHSFHRPFKCSTCDKTFLYKCDLKAHRSIHQDVDTSLLHCCDKCGYRTKAKSNLKSHYIRRHTDDYRFACEHCGKRFKMEWDLKFHVGTHGSSQHMCDICGKFYTSNYSLYKHRKVVHLNEYKFQCGVCNKRLLTQENLDSHMKQHSRTYECTECGKVFASKRYLATHTTTHTGVKPYACHVCEKNFRTSHMKNMHLLTHSAERPHVCDLCGHSFKRRTYMIEHRRKHPDAHLSSPPVPLGRKSVSELTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00983719; iTF_00982425; iTF_00983099;
90% Identity: iTF_00983719; iTF_00982425; iTF_00983099;
80% Identity: -