Tang012614.2
Basic Information
- Insect
- Tetragonisca angustula
- Gene Symbol
- -
- Assembly
- GCA_036937485.2
- Location
- JAWNGG010000127.1:195714-199270[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.5e-13 1.5e-09 37.8 0.0 1 39 322 361 322 365 0.90 2 4 2.3e-12 4.7e-09 36.2 0.1 2 39 377 414 376 417 0.94 3 4 8.4e-19 1.7e-15 56.9 0.0 2 45 432 476 431 476 0.97 4 4 9.6e-19 2e-15 56.7 0.1 1 42 483 525 483 526 0.97
Sequence Information
- Coding Sequence
- ATGAAACTCTATCCGCTGAAACGAACCTCGCTGTTGAAAACAGCCGATCAACTAAAGATCAAGGGACTTTGCGAGGTGCCCGAAAGTAGAGACGGCCCACCCTCGGTAAGCCTGAGTTCGCCACCAAGGGAACCCGGCACTCCTAGAATAAATTTCACCAAGTTGAAGAGACATCATCAGAGGTACAAAAGGCCTAGAACTACGTTCGAACCTCGCGCTACAGATTCGAGGCATTACGATCGATACAAAGAAGaggaatcgaacgaaaattacgATTGGGAGAACAAAGAGAATCACATAGACTGGCAACCCGAAGATGAGGAGTGTACGGAGGCAACTGCGGGAGCAGTAGTGCTGGAAACTTGCCAACGcaacaataacaatagtaCCACTACTGGcaacaccaccaccaccaccaccaccaccaccaccactaccaccaccaccaataacaacaacaacaacaacaacaacaatagcAATAACAACTCCAACGGCAACGGTAACAATAcaagcaacaacaacaacaacaacaacgGTGATATGTTTTGTCATACAGGTCTCGGTCATTACGGTCATCATCCGGATCCCGGTGAGGTTGATCTACCTCCAGAAACTCAACCGACACCGCCGAGTGCCACATTGGTCGGTACTACGATTACGCATTTAAGGGACCCGGATCATCATTCCACAGAGATTCAAAATTGTGACAGTGTAAAGATAAAGTTTGAAACGTTGCACACGATGGACTCGTCGGACACGATCGATATCGATAGCCACATGTCAGATCGAGCGAGCGTCAGTTCAAAGAACGCGGCCGATAGCGACAACATGATGATGATCACACCGGAATTGCTCGGATTGATGCCTTCTGGAAGTTCGATACACTCGGATTCTGGTGAAACTAACTCGAGGGGCCATTCCGGACAATCCAGCTCTCATCATCACGGTTCAAAATCGTGGACTCAAGAGGACATGGACGCTGCCTTGGAAGCCTTACGGAACCACGATATGAGCCTTACAAAAGCCTCTGCAACGTTCGGTATACCCTCGACGACATTGTGGCAACGAGCGCATCGGCTGGGAATCGATACTCCAAAAAAAGACGGACCTACAAAATCGTGGAGCGACGAGAGTTTAAACAACGCGCTCGAAGCACTGCGGACTGGAACGATATCAGCAAACAAAGCCTCAAAAGCGTTTGGTATACCGTCGAGTACCTTGTACAAAATCGCGAGAAGGGAAGGCATCAGGCTGGCTGCACCTTTCAATGCAAGTCCCACCACCTGGTCGCCTGCCGATCTCGATCGTGCCCTCGAAGCAATACGTTCCGGCCAAACGTCTGTGCAGAGGGCGTCGACAGAATTCGGTATACCAACGGGAACGTTGTACGGTCGATGCAAAAGAGAGGGCATCGAACTTAGCAGGAGTAATCCTACACCTTGGAGCGAAGATGCTATGACCGAAGCTCTCGAAGCTGTCAGATTAGGCCATATGAGCATTAATCAAGCGGCAATTCACTATAACTTACCATACTCCTCCTTGTACGGTCGTTTCAAGAGGGGAAAATACGAAGAACCAGCGGTGGGTGAAATATCGCAAGACGGTAGCAGTCCTCATTTTCATCAAAGCCCGAGTCAAAACCATTCGTCCGCTATACCCGAACAAATGCCGTACCAAGGCAGCTGA
- Protein Sequence
- MKLYPLKRTSLLKTADQLKIKGLCEVPESRDGPPSVSLSSPPREPGTPRINFTKLKRHHQRYKRPRTTFEPRATDSRHYDRYKEEESNENYDWENKENHIDWQPEDEECTEATAGAVVLETCQRNNNNSTTTGNTTTTTTTTTTTTTTTNNNNNNNNNNSNNNSNGNGNNTSNNNNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAADSDNMMMITPELLGLMPSGSSIHSDSGETNSRGHSGQSSSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPAVGEISQDGSSPHFHQSPSQNHSSAIPEQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_00230773;
- 80% Identity
- -