Tflu002547.1
Basic Information
- Insect
- Tetheella fluctuosa
- Gene Symbol
- znf711
- Assembly
- GCA_951216915.1
- Location
- OX578214.1:14040392-14058076[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 8.3 6.4e+02 1.8 1.2 2 23 265 286 265 286 0.75 2 13 0.011 0.84 10.9 1.3 1 23 291 313 291 313 0.97 3 13 0.0022 0.17 13.1 3.4 2 23 445 467 444 467 0.94 4 13 0.0099 0.76 11.0 0.0 1 22 473 494 473 495 0.91 5 13 0.025 1.9 9.8 0.1 1 23 509 532 509 532 0.89 6 13 2.6e-07 2e-05 25.5 3.5 1 23 537 559 537 559 0.98 7 13 2.9e-06 0.00023 22.1 0.7 1 23 565 587 565 587 0.97 8 13 8.7e-05 0.0067 17.5 5.1 1 23 593 615 593 615 0.98 9 13 7.1e-08 5.5e-06 27.2 0.4 1 23 621 643 621 643 0.98 10 13 0.003 0.23 12.7 3.5 1 23 649 671 649 671 0.94 11 13 7.6e-05 0.0059 17.7 0.5 1 22 677 698 677 698 0.96 12 13 0.00032 0.025 15.7 1.7 1 23 705 729 705 729 0.93 13 13 5.9e-06 0.00046 21.2 4.7 1 23 735 758 735 758 0.96
Sequence Information
- Coding Sequence
- ATGGAAGTGTATCTTTATAATTCTACAGTTTGCCGATTATGTGGAGAAGAAAATGACAATGGAACACTATTATATTCATGTGAAGAAAATACTCAAAACCTAAGTGAAATTATTAACTCATATTTACCAATCAAGGTATCTGATGATGGCCAGCTACCAAGGACCATATGTCCAGGGTGTGCTATTCAGTTGGAAGCCACCGTGGAATTTTTAAACCTCATAATAAATGGAcagAAAATAATACGTGAGTTACATATGAGAGAGAAAGAGTATAAAAAGACATTAATTAACTCTGCTGTTGAACAGGAGATTATTACAGagaatattgtttatgaagTAAACACAAGCGAAGGGGTGTACCAAGTAGAACACCCTATAGCCTTACAAGTGGCTGGTCTTGAGAAGCCTAAACGTAAGAGAGGCAGGCCTCCAAAAAAGCCTAAAAGTCCAGAAGAACTGGCCTTAGAGGCCACTGTGAGGGAACAAGTGTTGAAATCTGTGAAGAACGATGGTAGATATGAGGAGCCCACTGGCAAGAGGAGGCGCAAAACACCAACTAGGTTTAGGGAGGCTGTGCAGGGTAAAGAATTAGAGAGGATATTCAAAGAAGAGGGCATGATAGATCCTGAGGAGAGTGATGTAGAGGTAAAAACTGAAGCGCCTGAACAAAAAGTACCTGTGCCAAAGGAACCAGAAGTAATTGGGCATATGGAAGATTCTGGAGAACTTGTGGTGGTTGTGAAAGGGAAGGGACGTGGAAGGCCAAAAGgtcGAATGCGTCAAACCCGTGAAGAATGTGCAATATGTGGCATGCACTTCTCGTGCGTGGGTCGTTACATGTCACACATAGCCCAACACGGGCCTGTTATGTACCAGTGTGGACAGTGCCTGCAGACCTTCCCGACCAGACTCACCTTCAACACCCACCAACAAGACCACAATCATACCGGACAGAATGTCATACAGTGTCCTAACACCTTCCAACACACTAACTCTGAAGAAAATCAAGAACCATCTTCAGAAACTAAACAAGATACTTCCGTGGATAATTCAGTCATAAATGTGATGACGTCGCCTCCCGACGGCCTCCCGGATTTGAACCCACAGCCCATCGATGTTGATGTGGATGTCAATGTTGATCTGAAGACGCCAGACAAGAGAGCAGAGATCACCACGACAATCACATCTAGTTCAGCCGAAGTAGATGTTGTCTCTAGTCCAGTTGTAGATAATGTAAAGAAAGAAGACATTACAACGATTGATGTAGAACCTAAAAGTGAATCGCAACCCGATGAGGTGGTGGAAGTGACGCCGACCGGCAAAGTGAAACTGAAGTGTACCCACTGTGACAAGATGTTCAGTAGCAAGCAGAGCAAGTCTATGCATATAAAGGCCAGTCACCTGGGCGAGCGGCCGTACGTGTGCGCGGAGTGCGGCGCCAGGTTCGCGTACCCGCGCTCGCTGGCGCTGCACGCCGTGGCGCACCGCCGCGGCCGGCAGCGGCGCCCCGGCGGCGTGCAGGGGTACGCCTGCGACTTGTGCGGGAAGGTACTAAATCACCCATCGTCAGTGGTATACCACAAAGAAGCGGAACATGCGGGACAGAGATATGTGTGTAACAAATGTGGCAAGTCGTTCAAACACAAGCAGCTGTTGCAGCGACATCAGTTGGTCCACTCGCAGTTGAGACCTTTTACTTGTAAGGTATGTAACGCATCGTTCAAGACTAAAGCGAACCTAATAAACCATCAACTGCTTCACTCCGGCATTAAGAAGTTCACCTGCGAGATTTGCAAGCACAAGTTTGCGCACAAGACTAGCCTCACATTGCATATGAGGTGGCATACTGGTCAGAAACCCTACACGTGCAACGTATGCGGCAAGAGTTTCAGTCAGAAAGGTAACTTGTCCGAACACGCCCGGATCCACAGCGGAGAGAAGCCGTACCAGTGTTCGTTGTGCGGCCGCCGGTTCACCACCTCGTCCCAACACCGGCTGCACGCCACCAGGCACACGCAGCACCGCGCCTACGTGTGTGCGCATTGCGGGAAGAGGTTCGTGTCCCGGTCGTCCCGCGCGGCGCACCAGCGCCGGTCGGCGGGCGCGCGCGCGCACCGCTGCGCGCACCCGCAGTGCCCGCGCGCCTTCACCGAGCGCTGGGCGCTGCTCAAGCACATGCGCACGCACACCGGCGAGCGGCCCTTCCGCTGCCCGCACTGCCCGCGCACCTTCGCCGACTGCTCCAACCTCAACAAACATAAGAAGcaaGTTCACAAACAGGTCAGCCTGCTCGCCAACCAGCAACAAATGTTACAACAACAGCAGATGTTACAGCAGCAACTGTTACAAATGCCCCAACAAGCTCCGGCCAAGTACTCGGTGGTGGAAACTGACGAGGAGTTGGAGGAGCGCGTTATATACGTCACTTATGAGGACTCCAACTCGCCCGCATTCCATATACTTGATGCTGATCAGGCGGAAGAACTGGATGcagaaaaagtaacaaactgTGAAGTGTACCCTGAAGGCACGTTGATAGTGCCGCCTATGGAGCTGGAGCAGAGCGGGCCGCTGCTGTTCCAAGAGGAGTCGGAGGGCGACCATATGCCTgTGACAGACGAGCAAGGCAACCCACTACACTTCACGATGCAAGACGGCACGCGGCTCGCTATCACGTCAGCCGATGGACAATCTCTGCAGgtcatAACACAAGACGGACAGACCATTCCCGTGGAGATAAACGGATTTGAGGATGAAGAGGAGGAGGTCGACAATCCAGATACAATAGTTCATCATTTGGATCTTCAGAAGACTGTCGAAGAAAATGAGCCCGTTTACTTTACCCTCGTTTAG
- Protein Sequence
- MEVYLYNSTVCRLCGEENDNGTLLYSCEENTQNLSEIINSYLPIKVSDDGQLPRTICPGCAIQLEATVEFLNLIINGQKIIRELHMREKEYKKTLINSAVEQEIITENIVYEVNTSEGVYQVEHPIALQVAGLEKPKRKRGRPPKKPKSPEELALEATVREQVLKSVKNDGRYEEPTGKRRRKTPTRFREAVQGKELERIFKEEGMIDPEESDVEVKTEAPEQKVPVPKEPEVIGHMEDSGELVVVVKGKGRGRPKGRMRQTREECAICGMHFSCVGRYMSHIAQHGPVMYQCGQCLQTFPTRLTFNTHQQDHNHTGQNVIQCPNTFQHTNSEENQEPSSETKQDTSVDNSVINVMTSPPDGLPDLNPQPIDVDVDVNVDLKTPDKRAEITTTITSSSAEVDVVSSPVVDNVKKEDITTIDVEPKSESQPDEVVEVTPTGKVKLKCTHCDKMFSSKQSKSMHIKASHLGERPYVCAECGARFAYPRSLALHAVAHRRGRQRRPGGVQGYACDLCGKVLNHPSSVVYHKEAEHAGQRYVCNKCGKSFKHKQLLQRHQLVHSQLRPFTCKVCNASFKTKANLINHQLLHSGIKKFTCEICKHKFAHKTSLTLHMRWHTGQKPYTCNVCGKSFSQKGNLSEHARIHSGEKPYQCSLCGRRFTTSSQHRLHATRHTQHRAYVCAHCGKRFVSRSSRAAHQRRSAGARAHRCAHPQCPRAFTERWALLKHMRTHTGERPFRCPHCPRTFADCSNLNKHKKQVHKQVSLLANQQQMLQQQQMLQQQLLQMPQQAPAKYSVVETDEELEERVIYVTYEDSNSPAFHILDADQAEELDAEKVTNCEVYPEGTLIVPPMELEQSGPLLFQEESEGDHMPVTDEQGNPLHFTMQDGTRLAITSADGQSLQVITQDGQTIPVEINGFEDEEEEVDNPDTIVHHLDLQKTVEENEPVYFTLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01416108;
- 90% Identity
- -
- 80% Identity
- -