Tocu001248.1
Basic Information
- Insect
- Tethea ocularis
- Gene Symbol
- znf711
- Assembly
- GCA_963555595.1
- Location
- OY741957.1:2313858-2328991[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 8.5 5.5e+02 1.8 1.2 2 23 265 286 265 286 0.75 2 13 0.034 2.2 9.4 1.9 1 23 291 313 291 313 0.98 3 13 0.0018 0.12 13.4 3.5 2 23 440 462 439 462 0.94 4 13 0.0011 0.072 14.1 0.0 1 23 468 490 468 490 0.97 5 13 0.025 1.6 9.8 0.1 1 23 503 526 503 526 0.89 6 13 2.1e-05 0.0014 19.5 2.7 1 23 531 553 531 553 0.96 7 13 1.1e-05 0.00069 20.4 1.2 1 23 559 581 559 581 0.97 8 13 8.8e-05 0.0057 17.5 5.1 1 23 587 609 587 609 0.98 9 13 1.7e-07 1.1e-05 26.1 0.3 1 23 615 637 615 637 0.98 10 13 0.0023 0.15 13.1 3.4 1 23 643 665 643 665 0.95 11 13 0.00097 0.062 14.3 0.1 1 21 671 691 671 692 0.93 12 13 0.001 0.065 14.2 1.9 1 23 699 723 699 723 0.97 13 13 6e-06 0.00039 21.2 4.7 1 23 729 752 729 752 0.96
Sequence Information
- Coding Sequence
- ATGGAAGTGTATCTTTATAATTCTACAGTTTGTCGATTATGTGGAGAAGAAAACGATAATGGAACACTGTTATATTCATGTGAAGAAAATACTCAAAACCTGAGTGAAATTATTAACTCATATTTGCCTATCAAGGTATCTGATGATGGCCAGCTACCACGGACCATATGTCCAGGATGCACCATACAATTGGAAGCCACCGTGGAATTTTTGAACCTCATAATAAATggacagAAAATAATTCGCGAGTTGCATATGAGAGAGAAAGAGTATAAAAAGACTTTAGTTAACGCTGCTGTTGAACAAGAAATTATTACAGAGAATATTGTCTATGAAGTTAACACAAGCGAAGGAGTTTACCAAGTAGAACACCCAATAGCCATACAAGTGGCTGGTCTTGATAAGCCTAAACGCAAGCGAGGGAGGCCTCCGAAAAAGCCAAAAAGTCCAGAAGAACTGGCCTTAGACGCGGCAGTGAGGGAACAAGTGTCGAAGTCTGCGAAGAAAGACACTAAAGATGAGGAACCTACTGGAAAAAGGAGGCGTAAAACACCTACTAGGTTCAGGGAGGCTGTGCAGGGTAAAGAATTGGAGAGGATATTCAAAGAAGAAGGTGTGATTGATCCAGAAGAGAGTGATGTAGAGGTGAAGCCTGAAGTGCCGGAACCAAAGGTGCCTGTGCCGAAGGAACCTGAAGTCATTGGGCATATGGAAGACTCTGGCGAACTTGTGGTGGTCGTAAAAGGCAAAGGGCGTGGGAGGCCTAAAGGTCCAATGCGACAAACCCGGGAAGAATGCGCAATATGCGGCATGCATTTCTCGTGCGTGGGCCGGTACATGTCCCACATAGCGCAGCACGGGCCGGTGATGTACCAGTGCCGAGAGTGTAAGGATACCTTCCCGACCAGGCTCACCTTCAACACGCACCAGCAGGAACACGATCACACCGGACAGAATGTCATACCGTGCCTCCATAACactaactcaaaagaaaaacaagCAACACCTGAAACTTTGCAAGATGACTCCGTGAACAATTCAGTCGATAATGTGACGGCGGCGCCTTCCAACGGCCTCCCGGATTTGAACCCGCAGCCCATTGAAGTTAAAGTTAACAATGACTCGATGAAGAATTCCGACCAATCGGAGAGTAGTACTCCCATCACGTCAGTTGCAGGCGAAATTGATGTAACGTCTAGTCCTAATGTAGTCAATGTTAAAAAAGAAGCAGACATTACAAAAGACGATGCAGAAGCAAAGAGTGAGTCGCAGCCCGGTGAGGTGGTGGAAGTGACGCCGACCGGCAAAGCGAAGCTGAAGTGCAACCACTGTGACAAGATGTTCAGCAGTAAACAGAGCAAGTCCATGCATATAAAGGCTACTCACCTGGGCGAGGTGCCATACGTATGCGGCGAGTGCGGCGCGCGGTTCGCGTATCCTCGCTCGCTCGCACTGCACGCGCTGTCCCACTCGCGCCACCGACACCGACACACGCCCGCCATGGGGTACGCCTGCGATCTCTGCGGAAAGGTGCTAAATCACCCATCATCAGTGGTGTACCATAAAGAAGCGGAACACGCCGGACAGCGGTATGTTTGCATCAAATGCGGCAAGTCGTTCAAGCACAAACAGTTGTTGCAACGACATCAGTTGGTGCACTCGCAGTTGAGACCTTTCACTTGTAAGGTATGTAACTCATCGTTCAAGACTAAAGCGAATCTAATAAACCACCAACTGCTTCACTCCGGCGTTAAGAAGTTCACGTGTGAGATATGTAAGCACAAGTTCGCACACAAGACCAGCCTTACGCTGCATATGAGATGGCATACTGGTCAGAAACCCTACTCGTGCAGCGTATGCGGCAAGAGTTTCAGCCAGAAAGGCAACTTGTCGGAACACGCCCGGATCCACAGCGGAGAGAAACCGTACCAGTGCTCATTGTGTGGCCGCCGGTTCACTACCTCCTCCCAACACCGGCTACACGCCTCGAGGCACACGCAGCATCGCCCTTATGCGTGTGCGCACTGTGGGAAGAGGTTCGTGTCGCGCGCGTCGTGGGCGGCGCACTCGCGGCGCGAGGCGGGCGCGCGCGCGCACCGCTGCTCGCACGGCGGGTGCGCGCGCGCCTTCACCGAGCGCTGGGCGCTGCTCAAGCACATGCGCACGCACACCGGCGAGCGGCCCTTCCGCTGCCCGCACTGCCCGCGCACCTTCGCCGACTGCTCCAACCTCAACAAGCACAAGAAGCAAGTTCACAAACAGATCAGCCTGCTCGCCAACCAAATGCTACAGCAGCAGCAAGTGCTGGATCAGCAACTAGTGCAAGTGCCCCAGCAAGAAGCCCCGCCCAAGTACTCGGTGGTGGAAACTGAGGAGGACTTGGAGGAGCGCGTTATATACGTCACGTATGAAGACTCCAACTCGCCCGCGTTCCATATACTTGATGCTGAACAGGCTCAAGAACTGGAAGAAGATAAGACGAACTGCGAGGTGTACCCCGAAGGTACGGTGGTAGTGCCGCCCCTAGACTTGGACCAGAGCCAACCGTTGCTGTTCCAAGAGGAGTCGGAGGGCGACCATATGCCTGTGACAGATGAGCAAGGAAACCCTCTGCACTTCACGATGCAAGATGGCACGCGACTCGCTATCACCTCGGCTGACGGACAATCTTTGCAGgtTATAACACAAGACGGACAGACAATTCCGGTGGAGATCAACGGATACGAAGTGGACGaaGAGATTGACAATCCGGATACCATAATCCATCATTTGGATCTTCAAAAGACCGTCGAGGAAAATGAGCCCGTATACTTTACCCTCGTTTAG
- Protein Sequence
- MEVYLYNSTVCRLCGEENDNGTLLYSCEENTQNLSEIINSYLPIKVSDDGQLPRTICPGCTIQLEATVEFLNLIINGQKIIRELHMREKEYKKTLVNAAVEQEIITENIVYEVNTSEGVYQVEHPIAIQVAGLDKPKRKRGRPPKKPKSPEELALDAAVREQVSKSAKKDTKDEEPTGKRRRKTPTRFREAVQGKELERIFKEEGVIDPEESDVEVKPEVPEPKVPVPKEPEVIGHMEDSGELVVVVKGKGRGRPKGPMRQTREECAICGMHFSCVGRYMSHIAQHGPVMYQCRECKDTFPTRLTFNTHQQEHDHTGQNVIPCLHNTNSKEKQATPETLQDDSVNNSVDNVTAAPSNGLPDLNPQPIEVKVNNDSMKNSDQSESSTPITSVAGEIDVTSSPNVVNVKKEADITKDDAEAKSESQPGEVVEVTPTGKAKLKCNHCDKMFSSKQSKSMHIKATHLGEVPYVCGECGARFAYPRSLALHALSHSRHRHRHTPAMGYACDLCGKVLNHPSSVVYHKEAEHAGQRYVCIKCGKSFKHKQLLQRHQLVHSQLRPFTCKVCNSSFKTKANLINHQLLHSGVKKFTCEICKHKFAHKTSLTLHMRWHTGQKPYSCSVCGKSFSQKGNLSEHARIHSGEKPYQCSLCGRRFTTSSQHRLHASRHTQHRPYACAHCGKRFVSRASWAAHSRREAGARAHRCSHGGCARAFTERWALLKHMRTHTGERPFRCPHCPRTFADCSNLNKHKKQVHKQISLLANQMLQQQQVLDQQLVQVPQQEAPPKYSVVETEEDLEERVIYVTYEDSNSPAFHILDAEQAQELEEDKTNCEVYPEGTVVVPPLDLDQSQPLLFQEESEGDHMPVTDEQGNPLHFTMQDGTRLAITSADGQSLQVITQDGQTIPVEINGYEVDEEIDNPDTIIHHLDLQKTVEENEPVYFTLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01083571; iTF_01417048;
- 90% Identity
- -
- 80% Identity
- -