Basic Information

Insect: Tetheella fluctuosa
Gene Symbol: -
Assembly: GCA_951216915.1
Location: OX578230.1:9075672-9079030[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0014 0.11 13.7 1.9 1 23 135 157 135 157 0.98

2 13 0.00035 0.027 15.6 5.8 2 23 163 184 162 184 0.97

3 13 0.0036 0.28 12.4 0.3 2 20 187 205 186 208 0.93

4 13 0.00042 0.032 15.4 2.5 1 23 223 245 223 245 0.99

5 13 3.7e-08 2.9e-06 28.1 0.7 1 23 254 276 254 276 0.97

6 13 1.4e-06 0.00011 23.2 1.9 1 23 281 303 281 303 0.98

7 13 6.3e-07 4.9e-05 24.2 0.1 2 23 310 331 310 331 0.97

8 13 1.9e-08 1.5e-06 29.0 0.9 1 23 337 359 337 359 0.96

9 13 3e-05 0.0024 18.9 1.4 1 23 365 387 365 387 0.97

10 13 1.9e-05 0.0015 19.6 0.9 1 23 393 415 393 415 0.97

11 13 0.003 0.23 12.7 6.5 1 23 421 443 421 443 0.97

12 13 6.7e-05 0.0052 17.9 1.3 1 23 449 471 449 471 0.99

13 13 0.00025 0.019 16.1 0.4 1 20 477 496 477 499 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0014	0.11	13.7	1.9	1	23	135	157	135	157	0.98
2	13	0.00035	0.027	15.6	5.8	2	23	163	184	162	184	0.97
3	13	0.0036	0.28	12.4	0.3	2	20	187	205	186	208	0.93
4	13	0.00042	0.032	15.4	2.5	1	23	223	245	223	245	0.99
5	13	3.7e-08	2.9e-06	28.1	0.7	1	23	254	276	254	276	0.97
6	13	1.4e-06	0.00011	23.2	1.9	1	23	281	303	281	303	0.98
7	13	6.3e-07	4.9e-05	24.2	0.1	2	23	310	331	310	331	0.97
8	13	1.9e-08	1.5e-06	29.0	0.9	1	23	337	359	337	359	0.96
9	13	3e-05	0.0024	18.9	1.4	1	23	365	387	365	387	0.97
10	13	1.9e-05	0.0015	19.6	0.9	1	23	393	415	393	415	0.97
11	13	0.003	0.23	12.7	6.5	1	23	421	443	421	443	0.97
12	13	6.7e-05	0.0052	17.9	1.3	1	23	449	471	449	471	0.99
13	13	0.00025	0.019	16.1	0.4	1	20	477	496	477	499	0.94

Sequence Information

Coding Sequence: ATGGATGTTATAGACATAAATAAGTCCTGTCGAACATGTATGAAGACCAATGTGAACCTACTAGATTTGTTCGAGACAGTTAAAATTGAGGAGGATAATACTCTTCAATTAGTAAATATGCTCATGGAATGTACCACAGCGCAGGTATCAAAAGATGATGGTTTACCGCAGAAGCTCTGCAATGAATGTGTCAATTTACTGCAAATTATGTACACATTCCGTAACCAAACAGCAAAAGCACAAAAAGAATTTGAAAGATTGCTGCAATTGCAAACTGAAGTTAAGAAAGAATTTGCTGTTGaattaaaaactgaaaatgATCTGAATGATGATTACTTTGAACCCTATGAAGGTTTTAGTTTAAATGATGACTACTTGAAAGCAGAGTCAGAAGAAAAAGTTTATGAATGTAGTAAATGTCAAAAACGGTACAGCCAAGAGAAAAGGTTTTTAAGTCATATAGCTTCACACAATGTGCCTTCTTTGAAATGCTCTTATTGTAAGAAGTCATTTCACAAACAATCATCTTTAGATAAACACTTGACTAAACATGATAATAAATGTGAGGTGTGCAATGAAAATTTTGAGACTAAGAAACTTTTGAACGAACATGTTCCCATACATAAAGGAGAAGGGgtaaagactgagtgcaatgaaTTGATAAAATACCAATGTTTACAATGTGAAATGTCTTTCCCGAAGCACAGATCGCTTGCTATGCATATGAAAAAGCATAAGAATAAAGAGAACCATAAATCCTTTATATGTGATATTTGTGGGAAAGAGTTTTCTATGAAGAGTTTGTTGAAAAGGCATATGAGGCTGCATAGCGAACATgcatatgtatgtatgaaatGTAACAAGCGTTATTCTAGACAAGACCAGCTGATGGAACATATGAACAAACATAATGGCCATAAACCTAATGTTTGTCCATATTGTAATAAAGGGTTCTCACAACTAGGCAGCCTGAAAGACCACATCCGCGTCCACACGGGTGAAACCCCGTACCTGTGCTCGGAGTGTGGCAAGGGCTTCAGCAACAGCTCCAACCTGCGGCAACACATGATGCGTCACTCCGGTGTCAAGCCATACGCATGCAACTTATGTCCTAAAACATTCTGTACCAAAGGTCAGATGACGTCTCACGCGGCCACGCACACGGGCGCGCACCCGTACAAGTGCGACCAGTGCGGCGCCGCCTTCACCAAGCCCAACTCGCTCAAGAAGCATAAGTTCATACACCTCGGTGTCAGGCCCTTCGCCTGCGACACTTGCACTATGCGGTTCACGTGCAAGGACCACCTGAAGCGGCACCAGCGCATCCACACGGGCGAGAAGCCGTACCGCTGCCGGCTGTGCGCGCGCGCCTTCACGCAGAGCAACGACATGCTCAAGCATCTGCGCACGCACCTCGGCCAGAACCTCTACCAATGCTCAATATGCGGCAGCAGTTTCAGACTACTAAGTGAACTGAAACAACACTACCCTGTACACTTTATAGATGGTAAAGAAGTTGAGCCATCCCTCAAAACTTTTGAACCAACCAAACCACCCGAGGACGCCCAAACCGGTGACCCTAAACATGAAAAGGAAAATACTGAGGGAAGAAtaacaattacaattaatacCTGTGATCAAAATGGTTTAGCTGGTgatattactataaatatagaTCAAGGTGCGAGCTAA
Protein Sequence: MDVIDINKSCRTCMKTNVNLLDLFETVKIEEDNTLQLVNMLMECTTAQVSKDDGLPQKLCNECVNLLQIMYTFRNQTAKAQKEFERLLQLQTEVKKEFAVELKTENDLNDDYFEPYEGFSLNDDYLKAESEEKVYECSKCQKRYSQEKRFLSHIASHNVPSLKCSYCKKSFHKQSSLDKHLTKHDNKCEVCNENFETKKLLNEHVPIHKGEGVKTECNELIKYQCLQCEMSFPKHRSLAMHMKKHKNKENHKSFICDICGKEFSMKSLLKRHMRLHSEHAYVCMKCNKRYSRQDQLMEHMNKHNGHKPNVCPYCNKGFSQLGSLKDHIRVHTGETPYLCSECGKGFSNSSNLRQHMMRHSGVKPYACNLCPKTFCTKGQMTSHAATHTGAHPYKCDQCGAAFTKPNSLKKHKFIHLGVRPFACDTCTMRFTCKDHLKRHQRIHTGEKPYRCRLCARAFTQSNDMLKHLRTHLGQNLYQCSICGSSFRLLSELKQHYPVHFIDGKEVEPSLKTFEPTKPPEDAQTGDPKHEKENTEGRITITINTCDQNGLAGDITINIDQGAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01083555; iTF_00007328; iTF_01252034; iTF_00761893;
90% Identity: iTF_00007328;
80% Identity: -