Basic Information

Gene Symbol
rcor2
Assembly
GCA_951216915.1
Location
OX578230.1:7450680-7457103[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-09 1.8e-06 28.7 0.0 3 46 132 175 130 175 0.97
2 2 9.4e-12 1.5e-08 35.3 0.0 3 46 421 464 419 464 0.97

Sequence Information

Coding Sequence
ATGGTTTTGGCCGAAAGAAGTAATGATGTTCGTAATGGGAAGCGGTCAAGGGGGCCAAGCCCCAATGGCCATGGAAGTCCAGATTCCAGTTCAGAAGACGAGAATGTAGTACCGTTTGCAGCCGAGAAGATCAGAGTAGGTCGAGATTATCAGGCTGTTTGCCCTGAGCTGGAGCCAGTGGAACAGAGAAAACCAGAACTCATCTCTGATAGAGCCTTACTGGTTTGGTCACCAACTTGTGACATTTCTGACATCAAATTGGATGAATACATAACTACAGCCAAAGAAAAGTATGGATATAATGGTGAACAAGCACTTGGCATGTTGTTCTGGCACAAACATGATCTTAACCGAGCCTCCATGGACCTTGCCAACTTTACACCATTCCCTGATGAGTGGACAGTTGAAGATAAGGTACTTTTTGAGCAGGCATTCCAATTCCATGGCAAAAGTTTTCATAGAATAAGACAAATGTTGCCAGATAAATCAATAGCATCTCTAGTCAAATATTATTACTCTTGGAAAAAGACAAGAGCTCGCACTTCACTTATGGATGTTGTCAGTGAAGGTCGCAACGCAACAAGTTCTGGAACTGGCAAGCGAGAACCTGGACCCGTATCAGAGCCGGGTGGCTCAGATAAGGAATCAGATAATGATGAAAAGAAGTGGACTATCCACCGTGGTATTGTCCGTGGCGGGAAGTCCCTCGCGACGGGCGGGGCGTCGCATCGCGCCGCCGGTCAGCAGGGCGCCCAGGGCGAGGGCGGCGGCGAGGGCGCGGGCAAGTGGTGCACTGTTTGCGGCATTCTGTGCTCCCAGACCACGGCGCACAACTCGCACAAGTTGTGTCAGGCTTGCCTCGTGCACGCCAGAGGCACCGGAACAATGCGGCCGCTGTGCGGACCGTCGGGAAGGCGCGGGCCCGGCTCTAAACAGCAGCGGTACAAGCACCGGCTGCCGCGAGGCATTTACATCAATCACGATGATCTCGTCGCCATGGCGACCGGCCCCCAGCCCGGTGATCTCCCGCAGTCCGGCCTTATCAATCAGGGTGAAGCCATGCTAAAAGCTATGGACAGAGAAATTATATCACTAAAGAGACAAGTACAGCAGAACAAGCAGCAGCTGAGCGCGATGAAGCGCAAGGTGGGcgagggcgcgggcgcgggcgcgggtgcGGGAGCGGgtgcgggggcgggggcgggcgcgggcggcgtgGAGGAGCTGCGGCCCGGCGAGCCGCCCGCCAAGATCAACTCGCGCTGGACCAACGACGAGCTGCTCATGGCCGTCACCGCCGTCAGGAAATATGGGAGGGACTTCCAAGCCATAGCAGAGACACTAGGCACAAAGACAGAGGCGCACGTGCGCTCGTTCTTCATATCGTACCGGCGCCGCTACAACCTGGACGCGGTGCTGCGGGAGCACGAGGCCGAGCGCGGCTCCGGCGCCGGCACCGGCACCGGCACCGCGCATCACATACAAGCTGGTACAACAAGCACAGAGGGTGCTGAGAGTGCACCTGACAGCACAAATGCTAACAATGGAACCAGTTCTCCTTCAACTAAGGATGAAAAAATGGAGGTGGACAGTGAAGGCGTCGCTATTGGCGCGCCGGCGGAACAAGGCGGCCCACCCACCACACCACCGAAACACAAGCCCGCCAAGTGA
Protein Sequence
MVLAERSNDVRNGKRSRGPSPNGHGSPDSSSEDENVVPFAAEKIRVGRDYQAVCPELEPVEQRKPELISDRALLVWSPTCDISDIKLDEYITTAKEKYGYNGEQALGMLFWHKHDLNRASMDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRARTSLMDVVSEGRNATSSGTGKREPGPVSEPGGSDKESDNDEKKWTIHRGIVRGGKSLATGGASHRAAGQQGAQGEGGGEGAGKWCTVCGILCSQTTAHNSHKLCQACLVHARGTGTMRPLCGPSGRRGPGSKQQRYKHRLPRGIYINHDDLVAMATGPQPGDLPQSGLINQGEAMLKAMDREIISLKRQVQQNKQQLSAMKRKVGEGAGAGAGAGAGAGAGAGAGGVEELRPGEPPAKINSRWTNDELLMAVTAVRKYGRDFQAIAETLGTKTEAHVRSFFISYRRRYNLDAVLREHEAERGSGAGTGTGTAHHIQAGTTSTEGAESAPDSTNANNGTSSPSTKDEKMEVDSEGVAIGAPAEQGGPPTTPPKHKPAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00018116;
80% Identity
-