Basic Information

Gene Symbol
rcor2
Assembly
GCA_907165245.1
Location
OU015599.1:5106024-5112048[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.6e-10 1.4e-06 28.7 0.0 3 46 132 175 130 175 0.97
2 2 2.5e-11 3.5e-08 33.8 0.0 3 46 403 446 401 446 0.97

Sequence Information

Coding Sequence
ATGGTTTTGGCTGAAAGAAGTAATGATGTTCGAAATGGGAAGCGGTCAAGAGGGCCAAGCCCCAATGGCCATGGAAGTCCAGATTCCAGTTCTGAAGACGAGAATGTAGTACCGTTTGCAGCCGAGAAGATCAGAGTAGGTCGAGATTATCAAGCACTTTGCCCTGAACTGGAGCCAGTGGAACAACGAAGACCAGAACTCATCTCTGATAGAGCTTTACTAGTTTGGTCACCTACTTGTGATATTTCTGACATTAAATTGGATGAATACATAACAACAGCTAAGGAAAAGTATGGATATAATGGGGAACAAGCACTAGGCATGTTGTTCTGGCATAAACATGATCTGAACCGTGCCTCTATGGACCTCGCCAACTTTACACCATTCCCTGATGAGTGGACAGTTGAGGATAAGGTGCTTTTTGAGCAGGCTTTCCAATTTCATGGCAAAAGTTTTCATAGAATAAGACAAATGTTGCCAGATAAATCCATTGCATCTCTAGTCAAATATTATTACTCTTGGAAAAAGACAAGAGCTCGCACTTCACTTATGGATGTTGTCAGTGAAGGTCGCAATGCCTCAAGTTCTGGAACTGGGAAGCGGGAAACTGGACCTGGCTCTGAACCAGGTGGCTCAGACAAGGAATCAGATAATGATGAAAAGAAGTGGACTATCCACCGTGGTATTGTCCGTGGAGGGAAGTGCCTTGCTGCAGGCGGGGCGTCGCATCGTGGCGCCGGTCAGCAGGGTGCCCAGGGCCAGGGCGGCAGCGAGGGCGCGAGCAAGTGGTGCACTGTTTGCGGCATTCTGTGCTCGCAGACCACGGCGCACAACTCGCACAGGTTGTGTCAGGCTTGCCTCGTGCACGCCAGAGGCACCGGAACGATGCGGCCGCTGTGCGGACCGTCGGGGAGGCGCGGGCCTGGCTCGAAACAGCAGCGATACAAGCACCGGCTACCGCGGGGCATTTACATCAATCACGATGATCTCGTTGCCATGGCGACCGGACCCCAACCCGGTGAACCCCCGCAGACCGGCCTTATCAATCAGGGCGAAGCCATGCTAAAAGCTATGGACAGAGAAATTATATCGCTAAAGAGACAAGTGCAGCAGAACAAACAGCAGCTGAGCGCGATGAAGCGCAAGGTGGGCGACGCCGGGGTGGACGAGTTGCGGCCCGGCGAGCCGCCCGCCAAGATCAACTCGCGCTGGACCAACGACGAACTGCTCATGGCCGTCACTGCCGTCAGGAAATATGGGAGAGATTTCCAAGCCGTCGCCGAGACGCTGGGCACGAAGACAGAGGCGCACGTGCGCTCGTTTTTCATATCGTACCGTCGCCGCTACAACCTGGACGCGGTGGTGCGGGAACACGAAGCCGAGCGCGGGAACACACATCATATACAAGCTGGCACAACAAGCACAGACAATGCTGAGAGTGCACCTGACAGCACAAATTCCAACAATGGAACCAGTTCACCACAGTCTACCACTAAAGATGAAAAAACGGAGGTAGACAGCGAAGGCGTCGCCATCGGCGCGCCGGCAGAGCAGGGTGGCCCGCCCACCACGCCGCCGAAGCACAAGCCCGCCAAGTGA
Protein Sequence
MVLAERSNDVRNGKRSRGPSPNGHGSPDSSSEDENVVPFAAEKIRVGRDYQALCPELEPVEQRRPELISDRALLVWSPTCDISDIKLDEYITTAKEKYGYNGEQALGMLFWHKHDLNRASMDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRARTSLMDVVSEGRNASSSGTGKRETGPGSEPGGSDKESDNDEKKWTIHRGIVRGGKCLAAGGASHRGAGQQGAQGQGGSEGASKWCTVCGILCSQTTAHNSHRLCQACLVHARGTGTMRPLCGPSGRRGPGSKQQRYKHRLPRGIYINHDDLVAMATGPQPGEPPQTGLINQGEAMLKAMDREIISLKRQVQQNKQQLSAMKRKVGDAGVDELRPGEPPAKINSRWTNDELLMAVTAVRKYGRDFQAVAETLGTKTEAHVRSFFISYRRRYNLDAVVREHEAERGNTHHIQAGTTSTDNAESAPDSTNSNNGTSSPQSTTKDEKTEVDSEGVAIGAPAEQGGPPTTPPKHKPAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00018116;
90% Identity
iTF_01416735;
80% Identity
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