Tflu025813.1
Basic Information
- Insect
- Tetheella fluctuosa
- Gene Symbol
- -
- Assembly
- GCA_951216915.1
- Location
- OX578243.1:5578484-5586196[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-05 0.0082 16.5 0.0 7 35 46 73 42 78 0.88 2 2 0.0052 3.4 8.2 0.0 5 34 230 258 226 269 0.81
Sequence Information
- Coding Sequence
- ATGGACCATGGGATACCTCTGAACATACACGCAAGACCACGCATCGTCGGCCGACGGCCAAACGCCATCGTCAATATAGAAACGGACGTTTTCCAAGAGAAATCTTATAAACAATATTCGTCACAGCATTTACGTGACGCCTTGATCGCAGTCAAAAAAGGTTACAGTGTTTACGCAGCGTCAAACAAGTACGGTGTGCCAAGGAAAACTTTAAGGAATTGGATGGAAAAGTATGATATTAAAAGTCAGTTTTCTAAGGGCAGGCGTGGAGCGAGAACTACGTTGCTGGACCCGTTGGATTTTATGGCGGAGAGTGAAAGGTTTGATGGACAGATGAAGTTGAAAATTGCAACAGAAACGCAGCACTTTGCGATAGCCAACGTGCAGTGCCAGTACGACAGTCCGTCAGACACGGAGCCGGACGAACGTCCGGTCGCGCGGCCGCCGGACGACCACACGTATGACACGAGGGACGAACCGCCCGCGTTTATTATACAACATGTTAATGCTACAACTCGAATCCACGGCGTGTCGTCACAGGCGCCGTTCGTCGAAGTCCGGCCTAAGATCATGACGATAGAGCCCTCCTACAAGCCAGCTGTTAACGTTATACATGTAGGAGAGCCTCAGGCATCAGCCACCCCGGAGTACAGCATGAACAAGCGCATCAGACGCAGCGAGGGCGTGCTGCGCGCCGCCGCCGACTGCGTCAGCCGGGGACTCACCTTCCAGACTGTCTCCGAACAGTTCAACATACCTATATCTACTATAAGaTTCTTTATGGCGAGAAAAGGAATCTTGCCGAGGCGTCGACGAGGTCGCACCACTCAGCCAACACGACCATGCAGTAGTCCTGAGCCACCATTTCACATGCAGCATTTCAAATTACCAGATATGGTTGCATTACGATCGGATTGTGACGAAGATCCACCAAATGATAATTAG
- Protein Sequence
- MDHGIPLNIHARPRIVGRRPNAIVNIETDVFQEKSYKQYSSQHLRDALIAVKKGYSVYAASNKYGVPRKTLRNWMEKYDIKSQFSKGRRGARTTLLDPLDFMAESERFDGQMKLKIATETQHFAIANVQCQYDSPSDTEPDERPVARPPDDHTYDTRDEPPAFIIQHVNATTRIHGVSSQAPFVEVRPKIMTIEPSYKPAVNVIHVGEPQASATPEYSMNKRIRRSEGVLRAAADCVSRGLTFQTVSEQFNIPISTIRFFMARKGILPRRRRGRTTQPTRPCSSPEPPFHMQHFKLPDMVALRSDCDEDPPNDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01415767;
- 90% Identity
- iTF_01415767;
- 80% Identity
- -