Tocu004183.1
Basic Information
- Insect
- Tethea ocularis
- Gene Symbol
- pnr
- Assembly
- GCA_963555595.1
- Location
- OY741960.1:236910-249663[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-17 2.9e-14 52.9 4.1 1 35 119 152 119 153 0.97 2 2 5e-18 1.3e-14 54.0 6.0 1 34 173 205 173 207 0.98
Sequence Information
- Coding Sequence
- ATGttcggcggcagcggcggcttgggtgggggtgggggagggtacgggggcggcgggggcgagTGCTCCGACGGCTACGGGCTGGGCTACGTGGCTGGCGGCGGCCGGCTGCAGCAGTACGCCGCGCACTTCGCGCCGCACCAGAACGTGTGGCATCACCATCACGCCGCGCACCATGACACATATGGTGGCGGCGGCGTGGGGTCCGTGGGCGGCGTGGGCGGAGTGGGCTCGGTGGGCGGCGGGCTGTACGGACAGAACGTGGTGATGGGCTCCTGGTGTGCTCCCTACGACGCCCTGCAGCGCCCTCCTGCATACGATGGGGTGCTGGAAGTGTACGAGGAGGGTCGCGAGTGCGTGAACTGCGGCGCCAACAACACGCCGCTGTGGCGCCGCGACTCCACGGGCCACTACCTGTGCAACGCGTGCGGCCTCTACCACAAGATCAACGGCGTGAACCGGCCGCTCGTGAAGCCGAGCAAGAGGCTGTCGGCGGCGCGGCGACACGGCCAGTGCTGCACCAACTGCGGCTCGCGCAACACCACGCTGTGGCGGCGCAACAACGACGGCGAGCCCGTCTGCAACGCCTGCGGACTCTACTACAAACTGCATGGCATCAACCGACCCCTAGCAATGAGAAAAGACGGTATTCAAACGAGAAAACGCAAACCGAAGAAATCTGGAAATGGTTCGAAACCTAATCAAGATTCTGCGAAAAAGGATGGACACTGCTCTCCCGGAATTGACGATAGCAAATCGAGCCTAACAGAGGTACCGCTACCGCTGACGCAGACAATGTCGAATCACACGTCGGCGTCGGCTAAGGTGTCTCGCAGCGAGTCTCACGCGACGCCGGAACCATCCCCACACATACATACGCACCACGCGCACGCACACATGCACGCGCAGGGTCCCGGACACGGACACGGACACGGACACACGCAGTACCCGCTCGGGCTGGCGTCGACGCCGGCGGCGGCGTTCCTCTCCAACCCGTCGTTGTTCAACATCAAGAGCGAGCCGAGCGCGGGCGGCGCCAGTGCCGGCGGGTACGACGGGTACCCCTCCCACCCCACTGGCCACTACCACCCACAGCAACACTACTTGCACGCACTACAGTACGGGCTTGGTAACGGCGAGGAGGAGGAAGGCAGCGGGTTCCTGCACCAGCGCAACGTGACGGCGCACGCCAAACTGATGGCCTCCACGTAG
- Protein Sequence
- MFGGSGGLGGGGGGYGGGGGECSDGYGLGYVAGGGRLQQYAAHFAPHQNVWHHHHAAHHDTYGGGGVGSVGGVGGVGSVGGGLYGQNVVMGSWCAPYDALQRPPAYDGVLEVYEEGRECVNCGANNTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSGNGSKPNQDSAKKDGHCSPGIDDSKSSLTEVPLPLTQTMSNHTSASAKVSRSESHATPEPSPHIHTHHAHAHMHAQGPGHGHGHGHTQYPLGLASTPAAAFLSNPSLFNIKSEPSAGGASAGGYDGYPSHPTGHYHPQQHYLHALQYGLGNGEEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01083902;
- 90% Identity
- -
- 80% Identity
- -