Odup003597.2
Basic Information
- Insect
- Ochropacha duplaris
- Gene Symbol
- pnr
- Assembly
- GCA_951361185.1
- Location
- OX592693.1:223365-232698[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-17 3e-14 52.9 4.1 1 35 74 107 74 108 0.97 2 2 4.9e-18 1.3e-14 54.0 6.0 1 34 160 192 160 194 0.98
Sequence Information
- Coding Sequence
- ATGGATACAATGTCGTTCCCACCGAATTGGTTGCGGAGCATGGCTCTACTCGCAGGTGGCGGTGGCGTGGGCGTGGGCTCTGTGGGCGGCGTGGGCTCTGTGGGCGGCGCCCTGTACGGACAGAACGTGGTGATGGGCTCGTGGTGCGCGCCCTACGACGCTCTACAGCGTCCGCCGGCATACGATGGCGTGTTGGAAGTGTACGAGGAGGGTCGCGAGTGCGTCAACTGCGGCGCCAACAACACGCCGCTGTGGCGTCGCGACTCCACCGGCCACTACCTGTGCAACGCGTGCGGCCTGTACCACAAGATCAACGGCGTGAACCGGCCGCTCGTGAAGCCGAGCAAGAGGCTGGTGAGTGCCGACGCGGAGCTGCTCACGCGCTTCTATAAGGAGGGCTCCGTGCAGAGATGGATGAGTGTGGAGGGCATGGCCAGGGGCATGAAGAAGTCGGCAGCGAGGCGGCACGGCCAGTGCTGCACCAACTGCGGCTCACGCAACACCACTCTGTGGCGACGCAACAACGACGGCGAGCCGGTCTGCAACGCGTGCGGGCTCTACTACAAGCTTCACGGCATCAACCGACCCCTAGCAATGAGAAAAGACGGTATTCAAACGAGAAAACGCAAACCGAAGAAATCTGGAAACGGTTCTAAACCTAATCAAGACTCGGCCAAAAAGGATGGACACAGCTCTCCCGGAATTGACGATAGCAAATCAAGCCTAACAGAAGTACCACTGCCGTTGACGCAGTCAATGTCGAGTCACGGCGCGTCGTCGGGGAAGATGTCACGCAGCGAGTCGCACGCGACGCCCGAGCCTTCtccacactcacactcacacacgcACGGGCATCCctcacactcacactcgcaCGCGCACTCACACACGCACACGCAGGGGCACGCACACTCGCACTCGCAGTACCCGCTAGGGCTGCCCTCGGCGCCGTTCCTGTCCAACCCTTCGTTGTTTAACATCAAGAGCGAGCCGAGCGCGCCGGCCGGCTACGAGGGCTACCCCGcgcacgccgccgccgccgccgccgccgccggacACTACCACCCACAGCAGCACTACTTGCATGCACTCCAGTACGGCCTTGGAAACGGCGAAGAGGAGGAAGCCAGTGGGTTCCTGCACCAACGCAACGTGACGGCGCACGCCAAGCTCATGGCGTCCACGTAG
- Protein Sequence
- MDTMSFPPNWLRSMALLAGGGGVGVGSVGGVGSVGGALYGQNVVMGSWCAPYDALQRPPAYDGVLEVYEEGRECVNCGANNTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLVSADAELLTRFYKEGSVQRWMSVEGMARGMKKSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSGNGSKPNQDSAKKDGHSSPGIDDSKSSLTEVPLPLTQSMSSHGASSGKMSRSESHATPEPSPHSHSHTHGHPSHSHSHAHSHTHTQGHAHSHSQYPLGLPSAPFLSNPSLFNIKSEPSAPAGYEGYPAHAAAAAAAAGHYHPQQHYLHALQYGLGNGEEEEASGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01417380; iTF_00007662; iTF_00762227; iTF_01416437; iTF_01252410;
- 90% Identity
- -
- 80% Identity
- -