Tocu004287.1
Basic Information
- Insect
- Tethea ocularis
- Gene Symbol
- -
- Assembly
- GCA_963555595.1
- Location
- OY741960.1:2580928-2588089[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 4.6e-06 0.00029 21.6 7.6 1 23 197 219 197 219 0.99 2 26 0.0035 0.23 12.5 0.4 3 19 258 274 258 277 0.96 3 26 0.0002 0.013 16.4 2.1 3 23 307 328 305 328 0.96 4 26 0.001 0.066 14.2 1.3 1 23 381 404 381 404 0.97 5 26 0.0037 0.24 12.4 0.1 1 23 423 445 423 445 0.96 6 26 4.9e-05 0.0032 18.3 0.5 2 23 487 509 486 509 0.95 7 26 0.00045 0.029 15.3 2.3 2 23 549 571 549 571 0.97 8 26 0.00076 0.049 14.6 0.6 1 23 621 644 621 644 0.97 9 26 0.0099 0.64 11.1 0.2 1 23 702 724 702 724 0.97 10 26 0.0059 0.38 11.8 5.9 2 23 736 757 735 757 0.97 11 26 0.083 5.3 8.2 1.5 2 23 769 790 768 790 0.96 12 26 0.004 0.26 12.3 1.0 1 23 800 822 800 822 0.98 13 26 0.0062 0.4 11.7 8.5 1 23 851 873 851 873 0.96 14 26 0.00067 0.043 14.7 4.6 1 23 884 906 884 906 0.98 15 26 0.00058 0.038 14.9 1.9 1 23 914 936 914 936 0.97 16 26 0.0016 0.1 13.5 0.1 2 23 956 978 955 978 0.97 17 26 2.9 1.9e+02 3.3 2.9 1 23 1025 1047 1025 1047 0.89 18 26 0.0014 0.088 13.8 1.6 2 23 1058 1080 1057 1080 0.95 19 26 0.00094 0.06 14.3 0.3 2 23 1103 1124 1102 1124 0.95 20 26 0.001 0.066 14.2 0.3 3 23 1206 1226 1204 1226 0.94 21 26 0.021 1.3 10.1 2.7 3 23 1234 1254 1232 1254 0.96 22 26 0.017 1.1 10.3 0.8 2 23 1265 1287 1264 1287 0.95 23 26 0.53 34 5.6 2.6 2 23 1304 1322 1304 1322 0.89 24 26 0.21 14 6.9 0.5 2 23 1394 1415 1393 1415 0.93 25 26 0.0033 0.21 12.6 0.4 2 23 1426 1448 1425 1448 0.95 26 26 3.1 2e+02 3.2 3.1 2 19 1486 1503 1485 1506 0.92
Sequence Information
- Coding Sequence
- ATGGCCCTCAAACTCGGCAAGTGTAGGCTCTGCCTCAAGCTTGGTGACTTCTATTCTATATTCACGGTGGACAATGCCATCCAGCTCGCTGAGATGGTTATGGATTGCGCCCGAATCAAAgtatatgAAGGAGATGGGCTCCCTGATAAAATTTGTTCAGAATGCATACAAAAGCTTAGCAGTGCATACATCTTCAAGCAGCAGTGTGAAAGAGCTGATCAGGAGCTACGCCGAAATTATGTACCACCTCCAGGGTTCAGCGTTAGTCCAACACCACCAAACAGACAAAGTAGCGATTCAGCTTTCTCAACCCACACGGAGAGCTCCAAACCATCATCTTCGACTGAAGGCAAAGCAACCCCGGCAAGGAATCGTAAGCGCAGTATGGAAAGCGTCGACAACGCCTCCGTCGGAAGCCGCTCGCAAGAATACCGACCGAGTAGTTCCAAACGTGTCGAAGAACTCAGGAGATCTCAGAAAAGACCTCGGTGCACATCAGGGAACACATCCTCCGACTACGAAGACAATAACAGCCAGTCGAATTTCATGGCCGAAACGGATTCCGACGAACCACTAATTAAGAATGACTACAAATGTAAACATTGTCCCAAGTCTTTCAAAACCAATAAGAGTCTATGTAACCACTTGCGCATACATTCTTCGAGTAAAAATGATAGTAGTATGACAGAAAATATTGTGGTTAACATTCCAAGTAGAAACGAGGTAATGGATGCAGATGCGGATGCGGCTGACGTCGAAGATAAACTAGGTTGTCAGAAATGCGGCAAAACTTTCAAGTTGAAGATCATGTTGAAACGGCACAGCGATATATGCGGGAAGGAGGCTCAAAAGTCGCCACAGAAGGAGTTGCTCGTGTCGCTCGAACCTATCGACGGCGCACAGACCAAGAAGATCGACTGTCAGATGTGCACAACCAAGTTTAAAACTATAGCTAATCTGGAGAAACACATGAGAATATGCCACTCGGCGGTGTTGAAAAAGGAAACGGTGCCAGTCGAGTCTAAGATCGAAAGGGGGAAAGTGACCATCCCCTGCATTTACTGCGAGGAGACGTTTGACGATTATTACATTCATTGCGCTCATTTCGGTGCGTGTTCGAAGAGGGACGATACTATTCCGTACAAATGTCCGATATGTGAGAAAGTGATGTCAAGAAAGAACTCTTACTTCAATCACTTGAAGAACTTGCACTTTGAGCCTCGACCGTCGCATAAGTACGAGAGCGAGGAGAAGAAGCCGAATTACTTCGAGTGTCGGATGTGCAACAAGAAGTTGGCCAGCCAGGACCTGCTCATCACACATCTGGCGGCACACGTATCTAATATAGAAGAGCCTAATGAAATTGCTCTCGATGAGGAATCTAGAACGAGCACCTTAGATGATTCCGTATCAGTAACATCGATGTATAGTAACTCTCAAGTGTCAAGCGGCCCTCTCCAATGCGGCGTGTGCGACAAACGATTCAAATACAAGAGAGCATTAGAAACACACCAAATAAGGGTACATAGCTCCGGGGGAGTGGAAATAAAGATAGAACCACCTGATAAACCTTCAACGAGCCTGCTGAGCGAAACATACAGACAATCAGAGTCTGAATCTAGTCAAGAAGAAGGTGATGATAACACATGTGATATTTGCGAGAAACAATTCTCATACAAACGGCTGCTCCTACAACATAAACGCACGAAGCATAACATGTCTTCTGGTACGAAACGAGCGAAAATCAACCTTAAAGACTGCTCGGTGAAGTGTCTAATCTGTGACATGGATATGAAAGTGAGCGCGATCAATGAGCACAATCAGAAACACATTTCTGTTAACATGAAGCCGAGGAATGTGTATACTTGTGCCGAATGCGGAGATAAGTTCAAGAGTTGTAGCGCACTAGCTAATCACATAAAGCTGATTCATAGGCTGAAGCAGCAACAGATGCCAAAGCAGTTTGAAGGTGATTTGGCGGATTTTTGTGAGGTCGTTGTGACGAAGGCGGAACCGCTGGACTGGATCCAGAGTCACAACGGCTTTGGTGAGGTTCCCGGAAAAAATGACAAGGATGGCAAACCACTAGTGAACTTGTCAGGGTTTACCTGCCCTATCTGCAGCAAGCAGATGCCGACGCTGATATCTCTCAAGAGACATGTGAACTGGCATTCCAATGTGGGCAATAACATACAAAAGATAACCGAGTGTTTTGTTTGCAAAGAGacatTCCGTTTCCAGTGCCATTATAAGATCCACATGCGCATTCACTATAAAGACCCCAACTTGGACCCCAAACTGCTCACCTGCTCCATCTGCAACCGCAAGAGCAAACACCTCCGCGCCGCAATGGCACACATGAACTACCATAAACAAACACGCTTCAGTAGCAAAGACTACCAATGTTCTATTTGCAAACGGGTCTTCCAATACAGAAAAGTTTACCTCTCACACATGGCGATACACTACAAGAGGGGAGAAAGCGCTCAAAATACTATAGTAGGGGATGTACTCCCCAATTCGGCCGATAAAACTATATTTGATGGCACGCACACTTGCCACCACTGCGGCAAAGTTTGCGACTCCGAAAACTCCCTGAAACACCACATTATATGGCATAATTCCAAAACTTCGCTATATGGCGCTCGACACGAGTGTCACATCTGTAAACTCGTATTCACAAATAAAAGGAGATTGGAAATCCACACGAGAAGCCACTACGAAGACGAGAATGGACCCTTTAAATGTCACATCTGTGGCAAAGGCTACATCGAGGAGAACTACTTCAAGAGACATGTGAAGGGTCACAACTTCGACCACCAGTCTCATAAGAAGAGGATCGATAAACTCCGGAAGGATAAAGTGAAGTGTCCCATCTGTGCCCGGTTCTATCCCGACTTGGTGAAACTTATTCGTCATTTGAGGAGGACGCATCCGGAAAGCAAGATGATCAAGACTGATCCCGACGCGCCGCCGCCCATTTACTACTCGTGCAAGTTGTGCGCCAGAGAGTTCCTAGACGAGCGGAGACTCCAGTTGCACGAGGAGGCTCATCTCAGGAAACCAGAGCTGTTCAAGTGTAAATTCTGCGGAAAGAAAGCCATGTCTCTAAAGAGTCATAGAATCCACATCAAAGGCCATTTGACGACGAAGCACTTTGATAATCCTCTGAAGTGTCCGAATTGTGATGAGACATTCGTGAAAGGATATGACTTGCATCACCATCTGCGCGATGTTCACGACATCACCGAAACTTGGATAGCGGACGATACACAAAAAATCCTGAACGGGCCTCTCAAAGATTTACAATGCTCCATTTGCTTCAAGGTTTTGGCCAGCAAAGGAAACTTCGAAAGGCACATTGATTATCATAACTCCCTGAGGTGCAACTACTGCTTTGATTACTTCAGCACATTAAAATTCTTGGAAGGCCATTTGGCGTTTACGTGCGATAAGAAAAAGCTGGTCGGCGACTCTGAAGTTTTTCCCAAGAGAGTGAAGTGTCACTTGTGCTACAAAGCTTTCCACTTGCAAGTGAAATTGGATTGTCACTTGCGGACGCAACATGACATCAAAGTGTCCAAAGAGGCCTCCGCGAGCAAGAAGGAAATAATCTGCGACTATTGCTTCAAAGTGTTCGAAAACGAATACGCGCTGAGGAACCATAAGATTTATCATCGCACCATCGGATACTACGGGTGTCTTTATTGTAATAGGAAGTTCAATACTCTAACGCTGTATAGGAAGCATAAAAATTATCATTTCGCGCAGTTGAATGTCGACGAACCGACCAAATGTGAACACTGTGACGAGACGTTCGTTGCGTTCAGAGAGATGATATACCACATGAGAGACGTCCACGACGATAACAAAGAGTGGATAGTGGAGCCCAAGGAGTCCATAGAGGAGAAATGTCCGATCTGCAACAAGATCTTCTTCAACCTCCACAGACATCTCGACTACCACGAAGCTAACAAGTGCAATAAATGCAACGAGTACTTCTACTCTCAGATCGATTGTGATAACCATCTTTGCGCCATCGAGAGCGACGATGAAGTCTCTGTGAACAATCAAACTGGGGAAATTAAGTACGAGGAGTGCACTTTCTGTTTCAAGCCTATCACCAAAAAAGACTCTAAGCTGAAGCACGATAAAATTCATAGAGGCTCCGGATCGATTTCTTGCCGATTCTGTCCTCTTAAATTTAAGACTATGGACGCATTTAACATTCACGCTTTCTCCCACCGAAGTAGAAAGTACAATAAGAAGCCGATTAAATGTCGCAAGTGCGGCGAGAAGTTCGTCAAGTATGGACCGTTTATGCGGCACATGAAAGCCGCTCATAAGTCCATCAAGAAGGTACATTACAGGACGATCGTGAAGGCCGAGCAGTGCGTCGTGTGCGGTGATTACTTCCCCAACCTCCACAATCATTACCGGGCTCATCTGCTCAACCAGTGTCAACTGTGTCGCAAATATTTTACTTCCTCAAAAGTATTTTACAAACATGAATGTGATAAAATTGATTATGATTCATCTAAAGTATTTACAAGTGATGAGAATCTATTGGAACTCATAAATGCTTACGTTCCTAAGGACGAGAAGGATGATGAGAAGTTCTACGGTCACACAGACGACGAAGATGATGAACAGGACATAGCGTTACCTGAGCCCCAAGATGAGGAAAGTATAGTTGAAAGAAAAGTGCATTTAATGGTTCAGTCTCCCATAATATCCGACGTGCTCTCCCTCTACCAAAAACAGGAGGTCGCCAGCCAAAATGGGGATGATATAAGTCAAGATGGGGATGATCTTAGCCAAATTGGGGATGACTTGAGCCAAAATGGGGATGACTTGAGCCAAAATGGGGAAGATGTCGTCAAAAATGGGAATGATGTCATCAAAAAAGTTGCGAGTGCCGTTGATCAAAATATCGTCAATTTAACAGACGACGATTCTATGGATATCACAGATACTATTCCAGTAGTAATTATACTAGATGATTGA
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTVDNAIQLAEMVMDCARIKVYEGDGLPDKICSECIQKLSSAYIFKQQCERADQELRRNYVPPPGFSVSPTPPNRQSSDSAFSTHTESSKPSSSTEGKATPARNRKRSMESVDNASVGSRSQEYRPSSSKRVEELRRSQKRPRCTSGNTSSDYEDNNSQSNFMAETDSDEPLIKNDYKCKHCPKSFKTNKSLCNHLRIHSSSKNDSSMTENIVVNIPSRNEVMDADADAADVEDKLGCQKCGKTFKLKIMLKRHSDICGKEAQKSPQKELLVSLEPIDGAQTKKIDCQMCTTKFKTIANLEKHMRICHSAVLKKETVPVESKIERGKVTIPCIYCEETFDDYYIHCAHFGACSKRDDTIPYKCPICEKVMSRKNSYFNHLKNLHFEPRPSHKYESEEKKPNYFECRMCNKKLASQDLLITHLAAHVSNIEEPNEIALDEESRTSTLDDSVSVTSMYSNSQVSSGPLQCGVCDKRFKYKRALETHQIRVHSSGGVEIKIEPPDKPSTSLLSETYRQSESESSQEEGDDNTCDICEKQFSYKRLLLQHKRTKHNMSSGTKRAKINLKDCSVKCLICDMDMKVSAINEHNQKHISVNMKPRNVYTCAECGDKFKSCSALANHIKLIHRLKQQQMPKQFEGDLADFCEVVVTKAEPLDWIQSHNGFGEVPGKNDKDGKPLVNLSGFTCPICSKQMPTLISLKRHVNWHSNVGNNIQKITECFVCKETFRFQCHYKIHMRIHYKDPNLDPKLLTCSICNRKSKHLRAAMAHMNYHKQTRFSSKDYQCSICKRVFQYRKVYLSHMAIHYKRGESAQNTIVGDVLPNSADKTIFDGTHTCHHCGKVCDSENSLKHHIIWHNSKTSLYGARHECHICKLVFTNKRRLEIHTRSHYEDENGPFKCHICGKGYIEENYFKRHVKGHNFDHQSHKKRIDKLRKDKVKCPICARFYPDLVKLIRHLRRTHPESKMIKTDPDAPPPIYYSCKLCAREFLDERRLQLHEEAHLRKPELFKCKFCGKKAMSLKSHRIHIKGHLTTKHFDNPLKCPNCDETFVKGYDLHHHLRDVHDITETWIADDTQKILNGPLKDLQCSICFKVLASKGNFERHIDYHNSLRCNYCFDYFSTLKFLEGHLAFTCDKKKLVGDSEVFPKRVKCHLCYKAFHLQVKLDCHLRTQHDIKVSKEASASKKEIICDYCFKVFENEYALRNHKIYHRTIGYYGCLYCNRKFNTLTLYRKHKNYHFAQLNVDEPTKCEHCDETFVAFREMIYHMRDVHDDNKEWIVEPKESIEEKCPICNKIFFNLHRHLDYHEANKCNKCNEYFYSQIDCDNHLCAIESDDEVSVNNQTGEIKYEECTFCFKPITKKDSKLKHDKIHRGSGSISCRFCPLKFKTMDAFNIHAFSHRSRKYNKKPIKCRKCGEKFVKYGPFMRHMKAAHKSIKKVHYRTIVKAEQCVVCGDYFPNLHNHYRAHLLNQCQLCRKYFTSSKVFYKHECDKIDYDSSKVFTSDENLLELINAYVPKDEKDDEKFYGHTDDEDDEQDIALPEPQDEESIVERKVHLMVQSPIISDVLSLYQKQEVASQNGDDISQDGDDLSQIGDDLSQNGDDLSQNGEDVVKNGNDVIKKVASAVDQNIVNLTDDDSMDITDTIPVVIILDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00007332; iTF_01252037; iTF_00761900; iTF_01417044;
- 90% Identity
- iTF_01252037; iTF_00007332; iTF_01083560; iTF_01417044;
- 80% Identity
- -