Tocu021919.1
Basic Information
- Insect
- Tethea ocularis
- Gene Symbol
- ZBTB47
- Assembly
- GCA_963555595.1
- Location
- OY741985.1:3920652-3925251[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.013 0.85 10.7 1.0 1 23 5 28 5 28 0.89 2 28 0.00041 0.026 15.4 1.5 1 23 101 123 101 123 0.98 3 28 0.01 0.67 11.0 0.1 1 23 127 149 127 149 0.94 4 28 0.0065 0.42 11.7 0.1 2 23 155 177 154 177 0.94 5 28 0.0017 0.11 13.5 2.5 1 23 183 206 183 206 0.97 6 28 0.00029 0.019 15.9 0.1 1 23 213 236 213 236 0.96 7 28 0.00014 0.0087 16.9 0.4 1 23 242 264 242 264 0.98 8 28 1.1e-06 7.1e-05 23.5 1.0 1 23 270 292 270 292 0.99 9 28 0.00027 0.017 16.0 7.5 1 23 298 320 298 321 0.96 10 28 1.2 80 4.5 2.1 1 23 460 483 460 483 0.94 11 28 4.4 2.8e+02 2.7 0.2 2 23 508 530 507 530 0.93 12 28 0.012 0.78 10.8 0.3 1 23 554 576 554 576 0.97 13 28 0.0023 0.15 13.1 0.4 1 23 580 602 580 602 0.98 14 28 0.00043 0.027 15.4 0.5 1 23 607 630 607 630 0.96 15 28 0.0059 0.38 11.8 0.3 2 23 637 659 637 659 0.93 16 28 0.81 52 5.1 8.4 1 23 666 689 666 689 0.96 17 28 1e-05 0.00067 20.5 2.3 2 23 696 717 695 717 0.96 18 28 0.00026 0.017 16.1 1.7 1 23 723 745 723 745 0.98 19 28 0.018 1.2 10.3 0.7 1 23 891 914 891 914 0.96 20 28 0.33 21 6.3 0.1 2 23 940 961 939 961 0.96 21 28 0.026 1.7 9.7 0.2 1 23 983 1005 983 1005 0.98 22 28 9.3e-06 0.0006 20.6 0.5 1 23 1009 1031 1009 1031 0.98 23 28 3.8e-05 0.0024 18.7 0.4 1 23 1036 1059 1036 1059 0.96 24 28 0.0009 0.058 14.4 0.4 2 23 1066 1088 1066 1088 0.97 25 28 0.00015 0.0099 16.8 1.1 1 23 1095 1118 1095 1118 0.98 26 28 0.0061 0.39 11.7 3.9 2 23 1125 1146 1124 1146 0.96 27 28 1.3e-06 8.1e-05 23.3 0.9 1 23 1152 1174 1152 1174 0.98 28 28 0.2 13 7.0 0.3 2 23 1180 1202 1179 1202 0.91
Sequence Information
- Coding Sequence
- ATGAAGAACTTATACTTGTGCTTTTATTGTGACGAGAGATTCAGTGATACTGAAAAACTCCGATATCATAATAACGCTGAACATAATTCTCTGaaaacatttgaaattaaattcgcTTTGTCGAGAGTAAAGAAATGCGAATTAGTTAAAGTTGACGTCACAAAAATTGCCTGTAAAATTTGTAATGAAGATCTACACGATTTCAAtgtgttaaaaatacatatagcTGACAAACACAAGAAACACTTAGATCTAACATCGACCGATTGTGTACTACCGTTTAAAGTAACACAATGCGATTTCCAATGCGCGTTATGCGATGAGAAATACGAAGATTTCAAGTCATTGAATCATCACATGAACGTGCACTTCCAGAATTTTATTTGCGAGCAATGTGGTGCAGGGTTTATAACGCCTGAACGTTTGAGAACACACGGTTTCTCTCATGAAACTGGATCTGTTTCTTGCGACGCTTGTGGTAAGGTATTCCGATCATCGAACGCACAAAAAGAACACTACGCTACAGTCCATATGATGGTTAAACGTCATCGCTGTCCGCAGTGTCCGGAATCATTCAGGAATTACTTCCAGAGAAATAAACATGTATCTACAGTTCACGGTTTGAAACTAAAGGAATATAAATGCACAATGTGTCCAAAAGTATTCACTTTGAGCGGGAAATTAGGAGTGCACGTTAGGGCTGTGCATTTGAAAATGAAACGGTATTCCTGTGATATGTGCGAGTGGAAATTTTACTCTAAACCCGAGTTGAAGGATCATATGGTCAGGCACAGTGGCGAGAGAAAGTATAAGTGTGGTGTTTGTAAGAAAGCGTACGCTAGGAAATATACTTTGAAGGAGCATATGCGAATACATGAAAACGACAGGAGGTTCGTTTGTACGACATGCGGCAGGTCGTTTGTTCAGAATTGTAGTTTGAAACATCACACGAAAGTTCATCATCCGACGAATGTCGTTTCAGGGACGAAAGCAAATAGAACCGACTCGTCATTAAATGAGGACACAGAGAAGCAGCCAAAGAAAATAGTTCCGCTTTTTCAAGTAGCCTACGACCGGAGTTTATGCAAACCTCTGGGAACTGTCCTGGATTTCAGAAAGTTAAATGCACTGAAATCTAGTGTGCTAAAAAGTAGCATGTTACCTACAACTTCGAGAGACTTTACTCCCTCTCGCAGCCCATCGCCATTGTCACCTTCAGACTCTCCAATACTCTACATACAAGAAGACACGAGAGACCTGCCCGTAGAGTTTGTCCTTAAGCCAAAGATACATAATAAAACCCCAGACGTCAGGCAAAACATTTTAACAATTTTCGAGTTCTCAACTATCTACCCTTTCGTCTACAGTAATAATAAGTTCAAATGCTTCGTCTGCTGCCAACCATTCTTCGATACGACTCTTCTCAGAGAGCATATGACGGAGGCGCACACATTTACAGCTCTTAAAAGACTGATCAATAACAAGAGAGAAAATGTCTTAAAAGTAGACATTAGTGATATAATGTGCAAGATCTGCTCTCTAAGGCCAAAAGATCTGGTCGAGATGAAgcaacatttacaaaaaatccaCGAGAAGCCAGTTGATCCGGAATTACATGATAATATCATCCCGTTTAATTTACAAGCCGTCGATGGTTCACACAAATGTGTTATTTGCAACGAAACCTTTATCAAAGTGAGGGTATTGGTTATACACATGAGCGTACACTTCAACAACTACAGTTGTGAATTTTGCGGGTCAGGGTTCATGACTTTACGTCTCCTAAAGAAACATTTGGAGGTCCACGAGAATGGGAACTTTCCATGTGACAGGTGCAACAAGGTGTTCAATACGCCTTACAAGAGAACCCTTCATATAAGAGGTGTGCATTTGAAACAGTATCCCCGAAGATGTCCGATATGTCCCGAAAGATTCAACTCGAATTACAAAAGGACTATTCACCTGCAAGATGTCCATAATCAATCGACCAGGGTGCATAAATGCGAGACGTGTGGGCGTGCGTTTCATCTCAAATATCACCTGATATGTCACACCCGTTCAGTACATTTACAAGAGAGGAACCAGCAATGTGATGTTTGCCATCAAAGGTTCTCTAACAAGGAGTCGTTGAAGCGTCATATGGTTATACATACTGGCGAAAAAAATCATAAGTGTGATGTGTGTGGAATGGCGTTCTTGCGTCGAAAGAACTTGAAAGATCATTTGAGGTTGCATGATATGGgatTCATCGAAGAAACAAATTCATCCATAATACTGAAAGACGAAGATGGATCAGATATAAAATTAACAGTTCTCAAGACACCAATATGCCTCGACAACCTTGAGTATGAAAATGAAATTGTCACAAAAAAGCGTAAAACGAAAAATAAAGCATCAAAGGGAAGACTTAAAAAAGTTGTAAAGGTATTAGGAAATGTCGATGAAGATATACTAACTAATATTGAAGTTTTAAAAGCACCTATATCCCTGGATGCAATAAAATGTGAAGATGAACTTAAATCCTCGATAACTTTTAACGTAAAGACTGTACAAGGAACTTTTCTGTGTGGACAGTCTCGAAGGACTAAAGAAGATGAAATCTGGAAGCAAAATGCGTTGACCATCTTTGAACACTCATACGTATACCCTTTTATTCACGCCAGCAATAAGTATAAATGCTTCATATGCGCCAAGTCGTTTCTCAACGCAAATCTTTTAAAGGACCATACCAATAATGACCATACTACAAAAGAAATGAGGAAAGAATTAAACAACAGAGTACGAGATAAGAATTTAAAAGTTGACGTCACCCAATTGCAGTGTAAATTGTGTTTGGAAATATTAGTAAACTTGCAATCACTTAAAGAACATTTAAAAGGTCACGGAGAATCTATTGACCCGGATCATCAAGACAACCTCGTGCCTTTTAAGTTAAATGGCACGACTTTTGAATGCCAAATCTGTggcgaaaattatcttaaaTTGAGACTTTTAATCATTCACATgagtaaacattttaataatttcagttGTGAAATATGTGGATCCGTTTTTATTTCTAGGAATTTGCTAAAGCGCCATCTTCAAACTCATGAAACTGGCAGTTTCCCCTGCGATAAATGCGATAAAGTCTTTAGTAATTCAGCGAAAAAGACTTTGCATATGCGAGGGGTCCATTTGAAACAGTTTCCAAGAAGATGTCCTATCTGTCCTGAGAGATTCAACTCTGATTATCAAAGAACGAAACACTTGAGGATTGTTCACAATCAGACAACTGGTCTATTTAGATGTGAAACTTGCGGTCGAGAGTATGACTTGAAATATCATCTTCTCATACATATTAGATCCGTACATTTGCAGGAGAGGAATCAAGAGTGTCCTATCTGCCATTCGAGATTCTTCTCGAAATATTGTTTATCTAGACATATGGTTATCCATACAGGGGAGAAAAATTTCAAATGTGAGATTTGTGGGAAGGCCTATGCTCGACGGAAGAATTTGAGAGAGCATTCCCGATCTCATGAGGTTGGCCAAACTGTTTGTTCAGTGTGTGGACAGAATTGCGTGGACCATGTGGGTCTTGTTGCGCATGTAAGCGCTACGCATGGCGCTTTGAATTAA
- Protein Sequence
- MKNLYLCFYCDERFSDTEKLRYHNNAEHNSLKTFEIKFALSRVKKCELVKVDVTKIACKICNEDLHDFNVLKIHIADKHKKHLDLTSTDCVLPFKVTQCDFQCALCDEKYEDFKSLNHHMNVHFQNFICEQCGAGFITPERLRTHGFSHETGSVSCDACGKVFRSSNAQKEHYATVHMMVKRHRCPQCPESFRNYFQRNKHVSTVHGLKLKEYKCTMCPKVFTLSGKLGVHVRAVHLKMKRYSCDMCEWKFYSKPELKDHMVRHSGERKYKCGVCKKAYARKYTLKEHMRIHENDRRFVCTTCGRSFVQNCSLKHHTKVHHPTNVVSGTKANRTDSSLNEDTEKQPKKIVPLFQVAYDRSLCKPLGTVLDFRKLNALKSSVLKSSMLPTTSRDFTPSRSPSPLSPSDSPILYIQEDTRDLPVEFVLKPKIHNKTPDVRQNILTIFEFSTIYPFVYSNNKFKCFVCCQPFFDTTLLREHMTEAHTFTALKRLINNKRENVLKVDISDIMCKICSLRPKDLVEMKQHLQKIHEKPVDPELHDNIIPFNLQAVDGSHKCVICNETFIKVRVLVIHMSVHFNNYSCEFCGSGFMTLRLLKKHLEVHENGNFPCDRCNKVFNTPYKRTLHIRGVHLKQYPRRCPICPERFNSNYKRTIHLQDVHNQSTRVHKCETCGRAFHLKYHLICHTRSVHLQERNQQCDVCHQRFSNKESLKRHMVIHTGEKNHKCDVCGMAFLRRKNLKDHLRLHDMGFIEETNSSIILKDEDGSDIKLTVLKTPICLDNLEYENEIVTKKRKTKNKASKGRLKKVVKVLGNVDEDILTNIEVLKAPISLDAIKCEDELKSSITFNVKTVQGTFLCGQSRRTKEDEIWKQNALTIFEHSYVYPFIHASNKYKCFICAKSFLNANLLKDHTNNDHTTKEMRKELNNRVRDKNLKVDVTQLQCKLCLEILVNLQSLKEHLKGHGESIDPDHQDNLVPFKLNGTTFECQICGENYLKLRLLIIHMSKHFNNFSCEICGSVFISRNLLKRHLQTHETGSFPCDKCDKVFSNSAKKTLHMRGVHLKQFPRRCPICPERFNSDYQRTKHLRIVHNQTTGLFRCETCGREYDLKYHLLIHIRSVHLQERNQECPICHSRFFSKYCLSRHMVIHTGEKNFKCEICGKAYARRKNLREHSRSHEVGQTVCSVCGQNCVDHVGLVAHVSATHGALN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01437281;
- 90% Identity
- -
- 80% Identity
- -