Basic Information

Insect: Tetanocera ferruginea
Gene Symbol: L
Assembly: GCA_958299015.1
Location: OY282640.1:167682330-167691752[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 6.2e-06 0.001 20.7 1.7 1 23 174 196 174 196 0.98

2 19 0.52 87 5.2 5.8 1 23 202 224 202 224 0.98

3 19 2.7e-07 4.5e-05 25.0 3.1 1 23 230 252 230 252 0.99

4 19 1.2e-05 0.0021 19.8 0.3 1 23 258 280 258 280 0.98

5 19 0.5 84 5.3 2.2 2 23 343 366 342 366 0.88

6 19 0.003 0.5 12.3 0.2 3 23 390 411 388 411 0.96

7 19 0.074 12 7.9 0.7 1 23 513 535 513 535 0.97

8 19 0.00016 0.027 16.3 1.4 2 23 543 564 542 564 0.96

9 19 0.0018 0.3 13.0 0.1 1 23 572 597 572 597 0.90

10 19 2.1 3.5e+02 3.4 0.0 1 19 602 620 602 622 0.93

11 19 3.8 6.3e+02 2.5 0.7 3 23 634 655 632 655 0.84

12 19 0.0034 0.57 12.1 2.7 1 23 697 719 697 720 0.96

13 19 2.6 4.4e+02 3.0 1.5 1 23 900 924 900 924 0.88

14 19 0.0012 0.2 13.6 4.6 2 23 933 955 932 955 0.96

15 19 0.14 23 7.1 0.1 1 23 961 983 961 983 0.92

16 19 2.2 3.7e+02 3.3 0.4 2 23 991 1012 991 1012 0.94

17 19 0.53 88 5.2 0.5 2 23 1104 1125 1104 1125 0.94

18 19 0.012 2 10.4 0.0 1 23 1135 1157 1135 1157 0.96

19 19 2.6 4.3e+02 3.1 1.3 1 23 1164 1186 1164 1186 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	6.2e-06	0.001	20.7	1.7	1	23	174	196	174	196	0.98
2	19	0.52	87	5.2	5.8	1	23	202	224	202	224	0.98
3	19	2.7e-07	4.5e-05	25.0	3.1	1	23	230	252	230	252	0.99
4	19	1.2e-05	0.0021	19.8	0.3	1	23	258	280	258	280	0.98
5	19	0.5	84	5.3	2.2	2	23	343	366	342	366	0.88
6	19	0.003	0.5	12.3	0.2	3	23	390	411	388	411	0.96
7	19	0.074	12	7.9	0.7	1	23	513	535	513	535	0.97
8	19	0.00016	0.027	16.3	1.4	2	23	543	564	542	564	0.96
9	19	0.0018	0.3	13.0	0.1	1	23	572	597	572	597	0.90
10	19	2.1	3.5e+02	3.4	0.0	1	19	602	620	602	622	0.93
11	19	3.8	6.3e+02	2.5	0.7	3	23	634	655	632	655	0.84
12	19	0.0034	0.57	12.1	2.7	1	23	697	719	697	720	0.96
13	19	2.6	4.4e+02	3.0	1.5	1	23	900	924	900	924	0.88
14	19	0.0012	0.2	13.6	4.6	2	23	933	955	932	955	0.96
15	19	0.14	23	7.1	0.1	1	23	961	983	961	983	0.92
16	19	2.2	3.7e+02	3.3	0.4	2	23	991	1012	991	1012	0.94
17	19	0.53	88	5.2	0.5	2	23	1104	1125	1104	1125	0.94
18	19	0.012	2	10.4	0.0	1	23	1135	1157	1135	1157	0.96
19	19	2.6	4.3e+02	3.1	1.3	1	23	1164	1186	1164	1186	0.92

Sequence Information

Coding Sequence: ATGTACTCCACACACACTTCTTCCAGCTACTCACCCTCCATATCGGACGGCACTATGACGCCAAATTCACTGCACATgccacatcatcatcatcaacatcatgcACACCCACATTTGCCACcccagcatcaacaacaacatttgcaAGGCTTGCCACACGACGAGGATGCTGCAGGCAGAACACCACGTAGGCAACGTGTTAACATTGACAACGCTAACGGCCAGCTTAATGTTGGCGAAGGCGCCGAGGATGATGACGAAAATGCCGACAATGCGACTGACAAAAAACCGCACCGAACAGAAGGAGCACGCCTAAATGGTGACGCAGACACAACGGCGGAGCAGCAGCAActtcaacagcaacagcaacgtaATCGTCTGGGACGTTGTCGCACGGGTCTCGAGCATGGCATGAAAATTCCAACAAAACTGCGTAAAATCGATAGGGATTCAGCAAAGTTTGATAAGTTGACAAGTGATGGCATTAAGAGCAGCAGCGCAGCCGCCGCCGACGGATCCTATCAGTGTCAGTTTTGTGATAAATCATTTCCGCGACTCGGCTATTTAAAGAAGCATGAACAGagTCACGCCGAACATCTTCCATTTAAGTGTGATTATTGTGCACGTCTATTCAAGCATAAACGTTCACGCGATCGTCACACTAAACTTCATACCGGCGACAGACGCTATAGATGTCCGCATTGCGAAGCTGCCTTTTCTAGAAGCGATCATCTTAAGATTCACATGAAAACGCACGATAATCAGAAACCATTTCAGTGCACCATTTGCAATCGTGGCTACAACACTGCCGCCGCTCTTACCTCTCACATGCAAAACCATAAAAAACAGGCAGCCATTCTTGCGGCCGGTGGCAATCCTCAAGCTCTTAACTATAGTCCACGCTCAACAGGTTCTGCCTCCAGCAACGGTAGTCTGCATAAGCGTCGCTATGCCATGACTTCGGTGGCCTCGGACAGCAGTCCTAGTCGTTTGGAATATCCGAAACGTTTGCGTAGCAACTTTCTAACCTGCACCTATTGCACCAAAAATGACTTCACCTCCTTGGAACAGCTCAATACGCACATTCACTCAATGCATGAGAAGGAATTGCTGCCCCCGGCTGCACAAGCACCTACCAACACAGAGCTACAGACATTTCAGCTCGCCTGTGAATATTGCACTATGAAGTTTCCCAATCTGCCGGCTATGTTTCAGCACATGCGTTCGACACACATTGACCGGCTGACCAGCCCCAACTCCTACTTTGAACATTTTAACCGTTTGGCGGCAACGGGCACCTTTAGCCCACGTTTGATTTCTACCAATAAGTCTTTGCAACGCCCTGGTGCCAGCTCTTCAGAGGAGAATAACGTCAAGCTTGAGCAGAATCTAAGTCCCAAGACTCAAAGCTCTCAGGAGGCCAAACAGGAAGAGCCTACGGATCTAAGCCAAAACAAACGGCGTTCCGTAACTCCAATTTCACCCGTTTCACCACAATTGGAAAACTCTCCACGAACTCCTGAAAAGCCGGGCATATTTTTCTGCAACCAATGCAACGCTGGCCTGCCTGATTTTGAGAGTTTTCGCAATCATCTCAAGTCTCATATTGTGCAGGGAGCCCAATTAGTCTGCCATCACTGTGGCCTAAGCTTACGCGATCAGTCCGAATATGAGCGACACGTGATCTCACACTTTCTTATCACCAATTCGGAATTCAACTGCGGTGGAGGTAACTGCAACAAATCGTATGTTAAGCCCGAGGAGTTACAAAAGCATTTGCTAGATAGTCATGTGGTAACCATGTACAAGTGTGCTTTGTGCTCAGAGCTATTCGAGACCAAAGTGGCCATTCAAGTACATTTCGCTTGCACACACTCGCAGGAAACAAAGTTACTACGTTGCTCGGCATGCATGGATGTTTTTCGCTCGGAGCAGGACTTTAACACTCACGTGAAAACGCGTCATCAAGCGGTCAATGGTTCGTCCTCCGCCACCAACAACAACTCATCGCTGCAGTGTATGTTTTGTCGCACTGTCTGCTCCTCGGATCTAGAAATGCATTTTCACTTGGCAGCTCATGCACGGCAATTTCGTTGTCCTTCATGCCCGGAGACTTTCCACGTGGAGTTTTTGCTAGACCGTCATATGCAAAGCCATCATTCAGGCAGTGAACGGGCACCGCCAATGCTGCCACCTAATAAAGACAACTTCGAGGATCACTCATCATCCATTAATGcgaacagcagcagcaataatCAGCTTAGTCCCATGAACTCTATCTACGTGAACGCGCTTTTTGGAAAATCAACGCTTATGCCGCTGGCTgctcaaaacaacaataacagtatTCTTGATTATAATGTTGCCTTTGCCGCACATCTCAATAAAGGATTATTtcccgctgctgctgctgccgctgtAAATGCCGGTAAGTTCTATAGTCCTTTGCAAGTGGACACTAGTGGCATGAAGCATCCAGCCCTTATGTATGGCTTGGGTCAACGCTACTTTGACACAAATCGCACGCTTATCGATATGTACAATCAACATCATCAGGAAAAAAGCTCGGTAGTTCCAAGCTCTAGCACGTACTTCATAAGTCCCAAACACTCGTCCATGTCACAAGCGCAGGAGCAAACTCCACCCAATATTCGCAAAACACCCACCGATGGGGGTTCTATAACTCTAAACACCGGCTTCAGCTGTGGCATGTGTGAACGCAATGACTTTCGCACAGAGACCGAGTTGCACTCGCATCGTAAAATTGTGCACAACATGAAAACCGGAGTGAGTTTGCGTTGTGCCTACTGCTCAGGTAACTTCAAGTCGCGCAGTGAGCTCGAGCATCATATGAAGACGTGCCACAACTCAACGGGCAAGCATAAGTGTCTCATTTGTGACGAAATCTTTCCATCACCTGCTATACTCGCCGAACACAAGCTACAGCACTCCAAGGTGGGACAGTCGGGCAAGTGTTCACATTGCGCCAAACCATTGAACGATGTTGCCGCCTTCAAGGGTCATCTGACGGAGCATAACAACGAAGGGCAGATGCCGGTGCAGTGCATTTGTTGTCGCCAGTCCTTACATTCGGATTTCGAGATCGGCCTACATGCAAAATTCCACACCAAATCTTCCAACACACCCGAAGCTATTTGTGCGCTTTGCCTTGAGCCCATTCCGAATGCTCCAAGCGAGACTAAAGTATGCGAAAAATGTTGTCGCAAACACAACTTGAACAACAAGTTTAACAAGAGCCGTGAGAGCTACGAACGCACCAGCAACGAGCAACGCCACTACATTGAGAATCGTTGTAATCTCTGCAAAATGATTTTGCCGCATCCACAGAAACTACAGGAACATCTAGTCGAACACACTTTCGCGGGTTGTGAAGATCGCGGTTTTATCTGCTATATATGTTCCGCAGTTTTTACGGCACCCGCTGGACTACTAAATCACATGACCGAACACGGCCTAAATGCAAGACCCTACGATTGTAATCTATGCACGGATAAATTCTATTTCCGCGCTGAGCTGGATCATCATTTGGTCGATCATGAGCTACGAGAGATATTAGTGAAGGAACGCAGTTCGCCGCTTACATCAGCAGAACGAGAAGAGCCACGCGTCCGCAATGATCAACcggaacaacaaaaacagcagagCACGCCAGATATGCTTGGCGTCACAGCGGCAACAGCTGCCGTTAAAAAGGAAATTTTCGAGAATCACAACAAACATGAGGCTGGCGAGGAGGATGATGAATACATTGAAGTGGAAAAGGTGCCTGAGCTGGCCAATTCAAACAGAGGAAATGCCGAAATTGCCGACAATACAGAGATCTCGGAGAAACAAAGCAATCTCGTCGCGGCTGATTAG
Protein Sequence: MYSTHTSSSYSPSISDGTMTPNSLHMPHHHHQHHAHPHLPPQHQQQHLQGLPHDEDAAGRTPRRQRVNIDNANGQLNVGEGAEDDDENADNATDKKPHRTEGARLNGDADTTAEQQQLQQQQQRNRLGRCRTGLEHGMKIPTKLRKIDRDSAKFDKLTSDGIKSSSAAAADGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAAILAAGGNPQALNYSPRSTGSASSNGSLHKRRYAMTSVASDSSPSRLEYPKRLRSNFLTCTYCTKNDFTSLEQLNTHIHSMHEKELLPPAAQAPTNTELQTFQLACEYCTMKFPNLPAMFQHMRSTHIDRLTSPNSYFEHFNRLAATGTFSPRLISTNKSLQRPGASSSEENNVKLEQNLSPKTQSSQEAKQEEPTDLSQNKRRSVTPISPVSPQLENSPRTPEKPGIFFCNQCNAGLPDFESFRNHLKSHIVQGAQLVCHHCGLSLRDQSEYERHVISHFLITNSEFNCGGGNCNKSYVKPEELQKHLLDSHVVTMYKCALCSELFETKVAIQVHFACTHSQETKLLRCSACMDVFRSEQDFNTHVKTRHQAVNGSSSATNNNSSLQCMFCRTVCSSDLEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQSHHSGSERAPPMLPPNKDNFEDHSSSINANSSSNNQLSPMNSIYVNALFGKSTLMPLAAQNNNNSILDYNVAFAAHLNKGLFPAAAAAAVNAGKFYSPLQVDTSGMKHPALMYGLGQRYFDTNRTLIDMYNQHHQEKSSVVPSSSTYFISPKHSSMSQAQEQTPPNIRKTPTDGGSITLNTGFSCGMCERNDFRTETELHSHRKIVHNMKTGVSLRCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSHCAKPLNDVAAFKGHLTEHNNEGQMPVQCICCRQSLHSDFEIGLHAKFHTKSSNTPEAICALCLEPIPNAPSETKVCEKCCRKHNLNNKFNKSRESYERTSNEQRHYIENRCNLCKMILPHPQKLQEHLVEHTFAGCEDRGFICYICSAVFTAPAGLLNHMTEHGLNARPYDCNLCTDKFYFRAELDHHLVDHELREILVKERSSPLTSAEREEPRVRNDQPEQQKQQSTPDMLGVTAATAAVKKEIFENHNKHEAGEEDDEYIEVEKVPELANSNRGNAEIADNTEISEKQSNLVAAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01181395;
90% Identity: iTF_01181395;
80% Identity: -