Tfer025911.1
Basic Information
- Insect
- Tetanocera ferruginea
- Gene Symbol
- -
- Assembly
- GCA_958299015.1
- Location
- OY282642.1:76795290-76807297[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.7 2.9e+02 3.6 4.3 1 23 1567 1590 1567 1590 0.92 2 13 0.55 92 5.2 0.7 1 23 1760 1782 1760 1782 0.95 3 13 0.00011 0.019 16.8 3.8 2 23 1785 1806 1785 1806 0.97 4 13 3.3e-05 0.0056 18.4 0.2 3 23 1814 1834 1812 1834 0.98 5 13 1.6e-05 0.0026 19.5 4.8 2 23 1841 1862 1840 1862 0.97 6 13 6.6 1.1e+03 1.8 0.1 5 23 1875 1893 1874 1893 0.96 7 13 1.7 2.8e+02 3.6 5.4 3 23 1900 1921 1898 1921 0.93 8 13 0.018 3 9.9 0.1 2 23 1932 1952 1931 1952 0.96 9 13 2.7e-05 0.0045 18.7 0.6 1 19 1958 1976 1958 1980 0.95 10 13 1.4e-05 0.0024 19.6 0.9 1 23 1988 2010 1988 2010 0.98 11 13 0.00013 0.022 16.6 7.6 1 23 2016 2038 2016 2039 0.96 12 13 0.00015 0.025 16.4 4.3 1 23 2044 2066 2044 2066 0.98 13 13 0.0021 0.35 12.8 6.0 1 23 2072 2094 2072 2095 0.96
Sequence Information
- Coding Sequence
- ATGATAGAAAAAATGCAGTGCCCTGTGTGCACGTTATTCCTGCACGCAGGGATGAACCTATCGGATCATTTAGAGACTCATCCCAAGGAACAAGTGATTAAGGCACTTGTACAAATGACAGTCACACGTGCACTGGTAGATGATGTGAAAAGTGCATCAGCTGATGAATCTGTAGATGAAAAGAAACCTGACGTTGATCCCTTAATCCCTTTGTCGGCGATTACGACTGAAAAGGAGCTAGAACATTGTTCGAACTCTAATACAGATATTTCTTCATCGTCTTTGCAATCATCTTTTTCATCGAACAATAGCTTGAATATGACATTTGGCTCGCAACATCATCAGAAAAAAAAGGTTTCCCCTCTTTCCACATCGACAACACTTTCTAAACACTCGGGAAAACATATATTCAACCACCAGAATGTTACATCTTCGCCTGCTTATCAAAAGAGCATTGGCGCTATCAATTTAGCTGCTGGAATGAGTGAGACTATTGCTGATGTCACAAATGAAGTTTCGTCGATGCCGACTGATTTTAGTACATTCTCAAATCGAtgtcaacagcaacagcaagtaACGAGTCAATTTCAGCAACAACATATTACAGTTTCACAAACACCGGCCCCACAGTTAGAAATGGATCAAAAGTGTACACAGATAACTCCTTCCGGAACCTCGCAAAGTTTCCATTCTAAAGCACAGaaacatcagcagcaacaacaacaacagcagcagcagcaacaccaacagcaacaacaacaacaacagcagcagcaacaacagcagcaacaacaacaacaacaacaacaacagcaacatcaacaacaacaacaacaacaacagcaacaacaacaacaacatcatcagcagcaacaacaacaaaggcaACTTCATCAAGTGCCCCTGACGCAgcatgataatttaaaaattttttattcgtcCACATTGCCACCACCACCGCCACAATTACAGATGTTTAGCTACCAGCCGCCATCTCAGCCCCTACACCAAAAACCACCACCGGCTTATGGCACCGCCATCAGTCAAATACGATCTCAAcataaccaaaataaacaaactccACTGCAACCGAATCAATTGCATCGCTCGGCATCGGGGCCGACAGCAGCTAATTCAACATCGATTTCTAAGTCTCTTGTAGTGAAGAAAAATGTGCCTCCTCACCAGTCGCAGGTCTCTGCCGCGCATCATAAGCAATACCATCAAGCAccacaacaaaaccaacaactacaacaaaatcaacaacaacatcacccCCAACAGCAAAACCAACATGAGACTGTTCAAATTCAGCAACAActtccaaaaaatgttgccagtTCAGCAACATCCAACTCATTTCAGAAATTGGGAACATATCTACCGCGAGGTGCCACGCCTCTACAAACATCAACTCCTGAATTGCCAATGGCACCTTCTTGTACACCGCCATCATCAATCAACCGTCTTACGAACTCACCCTATCCACCACCTTTACTATCCGCAACTATGGCTTCACCTTCCTCTTGTTCATCTGTTCTTCGATATGCTGAATCGCCAGTTACTGCACATTATCTAGAACGAGATAATGGCGACTTCATCGTACAGGAAACTCCAAAACATATCGTAGAATGTGTTGAAAAGGATAACGGTGAATTCTCCGTGATTGAGCGCATTTATCAGTCGCCACCAAGTGTTCTACGCATACATGACGATGACGACGAGGAGGaggatgaagatgaagatgagcTCCATCAAGCTGATGCTAATGATAAGGATAAGGAAACAGAAACACACGAAGGTAAAGAAAAGAGCGTTAAAGAACATGACACCGAAGACGAATTTATGAGTATCGATGGAGATAGTGAACTGGAAGAATTAACAACAGAAACAACGCTTTCAGAAGAAAATGGCAAATCTACGAAAGAAACTGTAAATCAAAACATAGGCGTTGACAAACCAACAACCAGCGCTGCCGCCGCCGCCGCCGACGCCGACGCACAGACAAACTTAATTGTTAATCCAACGGGGTCAAGTCATGCAAGCAATAACAGTACTGCAACCAGTACTTCACGCAAGAAATCTTCGAAAAACACCATTACTGTCCTCAGTGATGTAcaacttaatttaaatgaatactTAGATTTGGTAGGTAACATTATAGCATCCAGCAAGATTGCCAAAAATCAAGCATTTGCTACAGCGATGCCGATGTCACTTGTTAAAGTAGAAAAAGTGGAACCCATCGATGATTATGAGACAgaggaacaacaacaacatgctgTTGACTTGGGTGAGGGTCTAAGAATTAGTGAAGAGtcagatatggatgttgaaacaGCCGCAATAAGTGTACAAgaaccaccaccaccaacaacatcaaccaccaccaacaataacaataaagatAATATTACTGAGACTGATTTAGTTGCAAATAATTTTAGTAGTAAGCAAATCCTACCAGAACAACCCACAGACAAAATAACCCCAGCCGACAGCAAAGCGAAGAAGCAGCACCACTCCAGTCATGCAACAACAAGTGTTATACGTATGGCAAGCACCACAACTAGTCAGCAATATTTAACAGAAGTCGTAGAACAGCATGTATCCAGTGTGAATTTAACTACACAATCCAATAAAGAAAAGTTGGCACATGAAGAATTAACACCTGAATCCAATCGTTGGAAACATGATGCCTTAAGTGAAAATGTTGCCGAAGATTTGTCGCcacaaacacaaataaaaactgAAGTAGTTTCCATAAAAACTGCCGATGCACCAGCACCTATACTTGCACCGTTGAAAAAGGGGCCAAAAAAACTTGTGATCAAACCAAAACCTAATAAATCTGTGACCAACAGCAGCAGAGAAGACGCTGCCGCAATCATTTGCGACGAGAAACCAGCAACTTTTGCAAGTACTCAAAAGTGCGATGCAAATCCCGTTACTTTGAATCAGGAAAATCAAGCATCCAAGTCTATAGTCATTAAAAGTGAACCCAATATGGCATCTGAAATGCCTAGTATATTGGAGCAGCATTTACGTATCCCCACAAATCCACCAGAGCTTAAGATAGAAACAGCTTTCTTGCGCCATGATACAGAAATGGTTTTCAAACAGGAGAATcagcaattttatataaaaaatgaaaatgatgaACTTAATATCGTGCCAAAGCAAGCTGATACCGAGGATAATCAACTTAAGCAATCCTCGCTACCACAAGAAAATGAAGACGCGCGCGTTTTGTTAGATTTTGCTAATTCTAATAAAAAGGAGGAAGTTGAGCCTGCAGTTGAAGTGGTACCCGCATTATTTCCATCGTCAAATTCTATATTTGGTGCCGCTACTGTGAATAAATCAATTCTGACGAATTCCACTTGTTCAACGTCATCAACGACTACATCAGGTGTTTCATGCAATGCCTTGGAAACATTGCGTTGCGACGATGAATTTATTGTTCCTGACGCTACAGATGTTGTTCAAGAAATTGTTATATCATCATGCTATTCATCACAATCAGCCTCAGATGTTGCGCTCGTTAATAACAATAATCAAAATGATGCTGACTCTCACCACCAACAACATAACAACTTTACCGACTATCCATTTAGCTTCCTGTATGGTGGCGGTAGCGTAGCCCAAGAAATTGCAACAAAAGGAAACTTTTCTCCAATTTATCATCAACAGCCCCACGATGCAACCACTGCTGCAACTGTTGCCTCAGGCAGCAATTCTGTGACTATTGGGGAATTAACGAATGATCATGTACATCGCAATCAAATAAACAATCGTTACCATCAGCCGACATCAGCTTCGGCAAGACAATGGTATCAAGCAGTTTCTACTTCAAATACTGATTTTGAGGCTGCACTAGCCGTTGATTGTGGCAATTGTACTGAAAGCAGTAATGCCGGCAACTATTTAGATTTGGATTCGTACAAGCGCGTTAGCATGTCAAATGGAGCTCATCCTACGGCAGCGGCGCTATCTTCCTCACTTTCGTCTTTCACTGCGGCAACAGAGAGTAGCTTAGCGGGTTGCACCACAGATGCTTTAAATATACGCACAGATGAAAAGATGCCAGCGAAAGGTGAAATATCGGAGCAAGAGAGCAATTGTGATATAGAAAACTCGTGGAGTCAATCGATGTATGGAGATATTCCAGTACGTTTCTTCAAGTCTTCATTCCCTGGTCTGTTTCCGCCAGAGAATTGTTGGAACAATGAGGAATACTTCACCGTACAGGACTTGAGTGCGTCAGCAGGTGTCACGAGTGTTAGCAATAAAGCCACAAAGagCTTTGATTTTCGTCTTCCTATGGAAACTGCTAGTACTACCACAGCAACACCAGGTACAAGTAACTCTacgcagcaacaacaaccacaacgcACTAACGCAATCCCATCAACATCTTCAAAGAAAAAACGAAAACGCGATTCACATGCAGCAAAAAGTACATCAGCGACAAGAATCATTGCTGCAACAGTTACGTCACTAGATTTGCAACAGcaacaggaacaacaacaacagcaactgcaggaaccacaacagcaacaagtTCAGGGATCGCTGCTTGCATATCCTCAAGAATCACCAACAACATCTGCTGCAGTATTGGCTGGTCCATCAACTACTGCCGCCGCTGGCGTTACGAATTCTGCTAGTACATCAAACAGGCGGGTTGCGAAAGTATTTACATGTGTTCATTGCTTGACGAAGTTTTCCAAGCTTAAAGATCGCAACCATCATATGGTCGCTCAGCATAATTATGTGCTGCGAAATTATCGCCTTGTTCCTATGCAGAAAGTTGCTCCAAATGCAGCTCCTGATACAGCGACAACTTCGACGAAAACAACAGCTTTATTGGCAGCAACAAGTTCGGACCCCGGCACTTCTGGTGCAGCTACTTGTTGCACAGCCATACTTTCAAcggaacaacaacaaattgaagTACAAGAAGATTCAAAGCGCGGTATAGTCAAAATTGAACTCGATCAAGCAGAGCAAGCCATTGCCGCTAGACTTGCTAGCGATGTAGAAGGAATTGAGCAAGTTTTGACCAAGTCTGAGTTTGTCGATGATAAGGATGACTTGGCTCTGGGGTCGACTAATATTGCGTCTGCTGCAGATGCTCCCGCCGATACAGTATTTTTACCTTCGCTGACTCGACTTTATAATCTCTATCACATGTTGGTCTCATTTAATATCGCAGCGCTTAAACAGAATCAAACACTCTCAGAGGCTGATGAGAAATTAATGCTATCATCAATATTCTTTTGTCTGATCTGTCGCCAAAAGTTTGGTACCGTAAAATTGTTTGACGCTCATATGACAGAGCACCCCGCTGAGTGTTTTACATGTGGCAAAAAATTCCATCGTTGGTCAAATTTGTCCTTGCATTTAAAACGTCATCTAGGCTGGAAGGAATTTGGCTGCAGCGTGTGTGATAAAAAGTTTGTGGTGCGCAGCGCCTTGGTGGAACATATGCGCATGCATACAGGACAAAAACCGCTTAAGTGCAACATATGTGacaaacacttcaaacgCTTTTCAAATCTCGCTCAACATCGTAAACGGCATGGTAAACAAATCATACGCAAAAAGGAGTTCGTTTGTTACTGTGGCGAAGTGCTTCCATCAAAAGCACGCTTTTTGTGGCACAAAGAAACTCATGATGCAAAACCGAAATGTTGTCCTTATTGCTGCGACCGCTTTGTGCATGCGAACTCTTTGCGACGTCACATACGCTTGGCCCACTCGGATAAATTTGACTACACCGAACCTATGGAGTGCCCCATGTGTAAGCAGGTCTTTGCCAAATCTTCAATACGTGCACACATGGCAACTCATTCAATGGAGATGCAACACGTTTGTCCAATTTGTAGCAAATCCTTCTCTACCAAATGGAATCTTAAAATACACTCATGGGTGCATGCCAACCGCACCTCGAAACCATTCAAATGCGAGCACTGTCCCAAGGCATTCGTGCGTGAAGTTGACTTTAAGAACCACATCAATGCACACAAACAAATCAAACCCTATACATGCGAATACTGCGGTTGCAAGTTCATACGTAAATACAATTATATGCGACATCGGCGTGAGCATCACGGCAACAAGAAATTCACCTGCGACCTTTGCAAGAAATCTTTCCATCGTCAGTACTATCTGGTTGAGCATCGACGCATACACACCGGAGAGCGACCATTCCAGTGCACAATTTGCGGCAAGAGTTCAACAACAAAGACTAATcacaacaaacatttaaaaatacatcattCACGCGATCCATTTACGGTTGAGGCCTAA
- Protein Sequence
- MIEKMQCPVCTLFLHAGMNLSDHLETHPKEQVIKALVQMTVTRALVDDVKSASADESVDEKKPDVDPLIPLSAITTEKELEHCSNSNTDISSSSLQSSFSSNNSLNMTFGSQHHQKKKVSPLSTSTTLSKHSGKHIFNHQNVTSSPAYQKSIGAINLAAGMSETIADVTNEVSSMPTDFSTFSNRCQQQQQVTSQFQQQHITVSQTPAPQLEMDQKCTQITPSGTSQSFHSKAQKHQQQQQQQQQQQHQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQQQQQHHQQQQQQRQLHQVPLTQHDNLKIFYSSTLPPPPPQLQMFSYQPPSQPLHQKPPPAYGTAISQIRSQHNQNKQTPLQPNQLHRSASGPTAANSTSISKSLVVKKNVPPHQSQVSAAHHKQYHQAPQQNQQLQQNQQQHHPQQQNQHETVQIQQQLPKNVASSATSNSFQKLGTYLPRGATPLQTSTPELPMAPSCTPPSSINRLTNSPYPPPLLSATMASPSSCSSVLRYAESPVTAHYLERDNGDFIVQETPKHIVECVEKDNGEFSVIERIYQSPPSVLRIHDDDDEEEDEDEDELHQADANDKDKETETHEGKEKSVKEHDTEDEFMSIDGDSELEELTTETTLSEENGKSTKETVNQNIGVDKPTTSAAAAAADADAQTNLIVNPTGSSHASNNSTATSTSRKKSSKNTITVLSDVQLNLNEYLDLVGNIIASSKIAKNQAFATAMPMSLVKVEKVEPIDDYETEEQQQHAVDLGEGLRISEESDMDVETAAISVQEPPPPTTSTTTNNNNKDNITETDLVANNFSSKQILPEQPTDKITPADSKAKKQHHSSHATTSVIRMASTTTSQQYLTEVVEQHVSSVNLTTQSNKEKLAHEELTPESNRWKHDALSENVAEDLSPQTQIKTEVVSIKTADAPAPILAPLKKGPKKLVIKPKPNKSVTNSSREDAAAIICDEKPATFASTQKCDANPVTLNQENQASKSIVIKSEPNMASEMPSILEQHLRIPTNPPELKIETAFLRHDTEMVFKQENQQFYIKNENDELNIVPKQADTEDNQLKQSSLPQENEDARVLLDFANSNKKEEVEPAVEVVPALFPSSNSIFGAATVNKSILTNSTCSTSSTTTSGVSCNALETLRCDDEFIVPDATDVVQEIVISSCYSSQSASDVALVNNNNQNDADSHHQQHNNFTDYPFSFLYGGGSVAQEIATKGNFSPIYHQQPHDATTAATVASGSNSVTIGELTNDHVHRNQINNRYHQPTSASARQWYQAVSTSNTDFEAALAVDCGNCTESSNAGNYLDLDSYKRVSMSNGAHPTAAALSSSLSSFTAATESSLAGCTTDALNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDIPVRFFKSSFPGLFPPENCWNNEEYFTVQDLSASAGVTSVSNKATKSFDFRLPMETASTTTATPGTSNSTQQQQPQRTNAIPSTSSKKKRKRDSHAAKSTSATRIIAATVTSLDLQQQQEQQQQQLQEPQQQQVQGSLLAYPQESPTTSAAVLAGPSTTAAAGVTNSASTSNRRVAKVFTCVHCLTKFSKLKDRNHHMVAQHNYVLRNYRLVPMQKVAPNAAPDTATTSTKTTALLAATSSDPGTSGAATCCTAILSTEQQQIEVQEDSKRGIVKIELDQAEQAIAARLASDVEGIEQVLTKSEFVDDKDDLALGSTNIASAADAPADTVFLPSLTRLYNLYHMLVSFNIAALKQNQTLSEADEKLMLSSIFFCLICRQKFGTVKLFDAHMTEHPAECFTCGKKFHRWSNLSLHLKRHLGWKEFGCSVCDKKFVVRSALVEHMRMHTGQKPLKCNICDKHFKRFSNLAQHRKRHGKQIIRKKEFVCYCGEVLPSKARFLWHKETHDAKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYTEPMECPMCKQVFAKSSIRAHMATHSMEMQHVCPICSKSFSTKWNLKIHSWVHANRTSKPFKCEHCPKAFVREVDFKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDLCKKSFHRQYYLVEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTVEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01181379;
- 90% Identity
- -
- 80% Identity
- -