Tfer024351.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tetanocera ferruginea
Gene Symbol
-
Assembly
GCA_958299015.1
Location
OY282642.1:50309168-50319016[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 4.9e-05 0.0082 17.9 0.4 1 23 247 269 247 269 0.97
2 29 8e-05 0.013 17.3 1.2 1 23 275 297 275 297 0.99
3 29 0.0035 0.58 12.1 2.6 2 23 333 354 333 354 0.97
4 29 0.76 1.3e+02 4.7 0.6 1 23 427 450 427 450 0.91
5 29 9.1 1.5e+03 1.3 0.5 1 19 487 505 487 508 0.88
6 29 0.0052 0.87 11.5 3.1 2 23 528 549 527 549 0.95
7 29 1.7 2.9e+02 3.6 2.5 1 23 556 579 556 579 0.95
8 29 0.075 13 7.9 0.6 2 20 587 605 586 608 0.93
9 29 0.01 1.7 10.6 1.4 1 23 692 715 692 715 0.98
10 29 5.7 9.6e+02 2.0 2.9 1 21 723 743 723 744 0.87
11 29 1.1 1.8e+02 4.3 1.4 2 23 754 776 753 776 0.94
12 29 0.0041 0.69 11.9 2.1 2 21 792 811 791 813 0.93
13 29 1.8e-06 0.0003 22.4 0.3 1 23 820 842 820 842 0.98
14 29 8.9 1.5e+03 1.4 1.6 11 23 891 903 881 903 0.73
15 29 0.0013 0.21 13.5 2.2 1 23 987 1010 987 1010 0.96
16 29 0.0012 0.21 13.5 0.3 1 22 1017 1038 1017 1038 0.95
17 29 0.071 12 8.0 1.1 1 23 1047 1070 1047 1070 0.95
18 29 0.0064 1.1 11.3 1.3 1 23 1085 1107 1085 1107 0.94
19 29 0.00042 0.069 15.0 4.4 1 23 1114 1136 1114 1136 0.99
20 29 0.74 1.2e+02 4.8 0.1 2 20 1163 1181 1162 1183 0.91
21 29 0.46 77 5.4 1.8 1 23 1246 1269 1246 1269 0.94
22 29 1.2 2.1e+02 4.1 0.6 2 22 1277 1297 1276 1297 0.95
23 29 0.3 50 6.0 2.2 1 23 1306 1329 1306 1329 0.96
24 29 0.0011 0.18 13.7 3.7 1 23 1354 1377 1354 1377 0.98
25 29 1.4e-05 0.0023 19.7 0.2 1 23 1409 1431 1409 1431 0.96
26 29 0.00028 0.046 15.6 3.1 1 23 1437 1459 1437 1459 0.99
27 29 9e-07 0.00015 23.4 3.4 1 23 1465 1487 1465 1487 0.98
28 29 2.4e-07 4e-05 25.2 2.4 1 23 1493 1515 1493 1515 0.99
29 29 0.0016 0.26 13.2 0.1 1 22 1521 1542 1521 1545 0.90

Sequence Information

Coding Sequence
ATGACAACAAATAACTTGGAGTACTTGCGTGCTAACGCTAAGTCCTTATGTCGCACTTGCTACCAGATCAGTACACATCTGCATCCGCTCTACGAACACACCGAGCAATTTCCCTTGAAGTCGCTGGCCGATCTGTTATACGACATAGCTAAAATTAAGATAGAATCAGCCAACCATGAGGATAGCTTGCCTGCGCAGCTATGCGGAAACTGTTCGCGTAAACTAAAGAATGCATATACATTTGTACTAAAGGCGCAGGAAATTAATGAGAACATGGCCAAGCAGTTGGATTGCCTGCTGGAAGCACCCATAGATATGCCATCGAAATCTTTGGAGTTTGTTAAGATCAAAATGGAAAATGAGTTTGCGGATGAAATAACCTTTGACTCTTTCTCCTTGCCGGATCATATAAGCGATGATTTTGAAAACAACGTCGACGCCGAGGAAGTGAAAGAGTTTTTCGAAGACTTTGATGAAGAGGATAATTGTACAGTGGCAAATATAAAGCGAAAAAATGCCGCTGCAGCAGTGGAACTAAAGAATGAAGAAAACTTTACACCGTGTGACGTAGAGCATACaaAAGATCCAATCAAGACTGAAGGAGGCAAAAGAAAACTTAGAAGTGCACCTGATACTGATTACGATAACGAATGTAATGATTCTGATAGTGACTGGGAGAAAATTCCTAAACGAAGaggcgttaaaaaaaagaaaaaacttgtgGATTCTAAGGGACGTTACTCGTGCGATGAGTGTGGCAAAACATTCGCATGGAAAAAAGACCTCAAACGTCATGCACTCAGCCACAATCCATGTCCAGCGTATCAATGCGATTTATGTGATCGCAGCTTCTTGCGAAAAGACAAGCTCAAAGATCATCTCAAAGTACATCAGCGTAGATCAGATGAAGCGGCTCAATTTGGtgctagacgcacacgtcatcCCGAATGGAACTTTGCTGAACGTCTTTATGCCGAAACACGCTTTAAAAAAGCTGAATGCAAATTGTGCAGTACTGAATTCAAATCTACACACCTGTTGCGTGCTCATCTGCAAAGTCACTCACAACTCGATACTCTACATATGCTGCAATTCGATAATGAAGTGGTCAAAGCTTTATATCCACAAACAACCCAGAGCTTAACTGAAATAAAATCTCAGATATGTCAAGATGTCTTGGAGCAGCGTTTGTGTAAATTTTATGCTATTGTTAATGAACACGGCTACGAGCTGAGCCTTAGCGATACGGATGTGGATCAAGAAGTAAACGTGGATAAATATAAGTGCGAACTATGCAGTGAAACATTAAGTAGCAAATTTGTAGCATTTGCTCATCTAAAAGACAAGCATTCTAATGACAAGATACCCTACAAGTGCATCGTATGCAAAGTCGAATTTGTCTGTCGCAAACTATTTGAtgaacacacacgcacacaatgccgcaataaagaaaagaaatacCAATGTTTAAAGTGTCCCGGCAAATTCATGTGgcttgaaaatttaaatgctCACAATTGTTCAAATCGCTTTAATAGCGCCGAATATAAGTCTCAATTGCCGAAAAAGCGCGAACTTTTGCAGTGTAAACTTTGCGACAAGACTTTCGTTTGCCGCAAGGATCTAAAGCGGCACGCAGAGTCACATGATCCAACTAACACTTCACATGAGTGCACCATCTGTTTGCAGCGGTTTTTAAAAGTCGAAAACTTGAAGTTGCACTATAAACAAACGCATGCCCAGATACGTCGACGCATTGAATGCTGTTTGTGTGGAGAACGTTTAAGCTCGTTGAAACAATTACGAGCTCATCTTCCTCAGCATGCTGATGGCATTTCTGGCATAAACAGCCAGAatggtatattttttaaatactatcAAAATGAGTACAAGACAGAGTCAGCGGATGGCCAGCCAACGGAGATTGCACAagttattgcaaaaaattttctgcAGCAAACAACAGCACGTTTTTATTTAGCCGTCGATGAGAGCGGCAATGAACTGGATTTGGACGCATCTGAAACTGACGATGACTCTGAATCAGTCTCAGTCGATGATAAGAAAGCTATTTATAAATGTGAAGTATGTAAAAATGCATTCACCAGAAGAAAACGCATTCTCATGCATCAAAATACTGAGCATGAGCAGCTAGAAACTCTACCACATCGCTGTGAAAATTGCAGTAAGCAATTTGTTTGCCTCGAACTATTGCATAGCCATGTACAATCGGATTGCCGCAATATTTACAAGAAGTGGAACTGCAAGAAGTGTACATCACGTTTTGTTTGGGAGCAAAATCTGCAGACACATACGAACATGAAACATTTTGATCCCGAGCAGCAGATAAACCGCAAGCTAGCCAACAAATTGCAGTGTGATGATTGcgataaaacttttatttggcCCAAAGACCTGAACCGTCACAAACGCTGTCATCTGCCCGATGATGAGAAGTACGAGTGTCCGTTGTGTCCACGACGTTTTAATCGCAAGGACAACATGCAGGCTCATGTGAAAATTCATGGTGCAGCTGCAGGTATGACAGCCGTTTGCAAAAGGGACTTCTCAAGATCTGGCAAGCAAAGTAAAGTTAAAGCTGTTGACGAGCATCTTTGTAAACCGCATGGCTGCAAATTGATTCAGTGCATGATATGTTTGTCCAAACATTCGAAAATCGCTGATTTACGCACACATTTGCGTACACATCAATATGTCATTGCACTAGCACAGCGTGGGCGTATGGAGGATATTTCTGAAATATCAGTGCTACTTTATCCGGATGAAGCACCTATGGTTTCAGAGCAGGTTTTAAGTCAACGCATTATGGCCGATATAAGTGAACATAGTTTTGAGCGTTTCTACTCTATAACAAATGAGGTTGGATATGAGTTAAATCTCAGTGATTCCGAAACTGAAAGTGATTCGGAATTAGAACAGGAAGCGCCAACAAATTCCTATACTTGCGATTTGTGTGAAAGAAAGTTTGATAGAAAGTACAAGCTGTTTGAGCATGAAAAGTATGTGCATGAATGGTGTGAGCTGCCACATGTTTGCGAAACATGTGATGCCAGATTTGCATCGGAAGACTTTCTACAGCGTCATCTCAAAACACAGTGTCGAAACATGCGTAAGCGTTTTCTTTGTCGAAAATGTCCGATGCAGTTTATGTGGAAGGATAATTTGAAAACCCATGAGCGCACGCTGCATCCGGAAAAAGAAGATCAAAGAAGAAGAACCGACACCAATCGCTTTGAATGTGAGGAATGCCATCAAACGTTTGCCTGGCAAAAAGATCTAACGCGCCATTCTATACAACATCAGCCCGAGGCAAATGTTTTCAAGTGCCTCTGGTGTCCACGTAGATTCTATCGCAAAGATAAACTTCATATGCATATAAAACGTCACAATTTAACGCCGGAATGTTTGCCTGTTGCTGAAAGCCAAAACCGTGCCAGTGGCGGTCCAAATGGCAACAAAGAAGTTTATTGCAAGATTtgcgatttgaaatttttaagcattttctcACTCCGTGCACATTTACTGCAAAGTTCATTCGAAAGTACGGATTTACCAAATTCCACTGAACAACAATTTGAACCCAATCATTATGAGTATAACTCGTATTTAAACTATTCCATAACAAATCATATTGGTTTTGAGCTGCATCTGGATGATTCAGAAACTGACGGCGAAGGGGTTTTCTTGCCCAAATCTGAAGGTACACCGCTTAAATACTACTGCGATCTGTGTCATATGGAATTTTTACGCAAGTATGAAGTAATTCAGCATCAATACAACATACATAGCTATGAACTAATGCCACTTAAATGCGACAAATGTGTGTTTAAGACAGTTTCCAAGGATATTCTGGCTCATCATATGCGCACTCAGTGCTTCAATACGGATAAACAATTCCAGTGCAATACTTGTTTGTATAAGTTTATGTGGCAAGAGAATCTTCACAGTCACATTCAACTCATGCATCCCAAAAAAGCAGCCGCAGCAATGGGCGATGAAACGCCAAAATCTATATTGAATAAAGCAATTCAGCGTTCATATCAATGTGAGCTGTGCAAGTGTAAGTATAATAGAAAGGATCGTCTGACCGCCCACATAAAAAAGGTACACATAAAAGGCGAAGAAGGTGATAACCCCAATGATGCTTCTGAAATTGATCCAGCTACCGGCGAACAAATTCAGAAACCTCCTTTAGAAAAGAAATATCTTTGTGCATTTTGTGGGCGTGCTGTTACTTCATCATCCAATCTTATCATACATATGCGTCGGCACACTGGCGAAAAACCTTTTAAGTGTGACTTTTGTGATATGGCTTTTCCGCGTTCTTCCGACTTGCAATGTCATCGTCGCACACATACTGGCGAGAAACCACACAAATGCACTGTCTGCGAGAAAGCCTTTTCGCGTTCCTATAAGCTACAGACACACATGCGTATACATTCTGGCGAACGTCCCTACAAGTGCACATACTGCGAGAAGAGTTTCACACAGTCAAACGACTTAACATTGCACATAAGGCGTCATACTGGCGAACGACCATATGTCTGTGGCATATGTGGTGAACGTTTTATACAAGGTACGGCTCTCAAGAATCATCGTACGATGCGTGGCCACTATGAGGATGTGGAGCCGCGAAAATTAACTATTTTAGAACGATTTTAG
Protein Sequence
MTTNNLEYLRANAKSLCRTCYQISTHLHPLYEHTEQFPLKSLADLLYDIAKIKIESANHEDSLPAQLCGNCSRKLKNAYTFVLKAQEINENMAKQLDCLLEAPIDMPSKSLEFVKIKMENEFADEITFDSFSLPDHISDDFENNVDAEEVKEFFEDFDEEDNCTVANIKRKNAAAAVELKNEENFTPCDVEHTKDPIKTEGGKRKLRSAPDTDYDNECNDSDSDWEKIPKRRGVKKKKKLVDSKGRYSCDECGKTFAWKKDLKRHALSHNPCPAYQCDLCDRSFLRKDKLKDHLKVHQRRSDEAAQFGARRTRHPEWNFAERLYAETRFKKAECKLCSTEFKSTHLLRAHLQSHSQLDTLHMLQFDNEVVKALYPQTTQSLTEIKSQICQDVLEQRLCKFYAIVNEHGYELSLSDTDVDQEVNVDKYKCELCSETLSSKFVAFAHLKDKHSNDKIPYKCIVCKVEFVCRKLFDEHTRTQCRNKEKKYQCLKCPGKFMWLENLNAHNCSNRFNSAEYKSQLPKKRELLQCKLCDKTFVCRKDLKRHAESHDPTNTSHECTICLQRFLKVENLKLHYKQTHAQIRRRIECCLCGERLSSLKQLRAHLPQHADGISGINSQNGIFFKYYQNEYKTESADGQPTEIAQVIAKNFLQQTTARFYLAVDESGNELDLDASETDDDSESVSVDDKKAIYKCEVCKNAFTRRKRILMHQNTEHEQLETLPHRCENCSKQFVCLELLHSHVQSDCRNIYKKWNCKKCTSRFVWEQNLQTHTNMKHFDPEQQINRKLANKLQCDDCDKTFIWPKDLNRHKRCHLPDDEKYECPLCPRRFNRKDNMQAHVKIHGAAAGMTAVCKRDFSRSGKQSKVKAVDEHLCKPHGCKLIQCMICLSKHSKIADLRTHLRTHQYVIALAQRGRMEDISEISVLLYPDEAPMVSEQVLSQRIMADISEHSFERFYSITNEVGYELNLSDSETESDSELEQEAPTNSYTCDLCERKFDRKYKLFEHEKYVHEWCELPHVCETCDARFASEDFLQRHLKTQCRNMRKRFLCRKCPMQFMWKDNLKTHERTLHPEKEDQRRRTDTNRFECEECHQTFAWQKDLTRHSIQHQPEANVFKCLWCPRRFYRKDKLHMHIKRHNLTPECLPVAESQNRASGGPNGNKEVYCKICDLKFLSIFSLRAHLLQSSFESTDLPNSTEQQFEPNHYEYNSYLNYSITNHIGFELHLDDSETDGEGVFLPKSEGTPLKYYCDLCHMEFLRKYEVIQHQYNIHSYELMPLKCDKCVFKTVSKDILAHHMRTQCFNTDKQFQCNTCLYKFMWQENLHSHIQLMHPKKAAAAMGDETPKSILNKAIQRSYQCELCKCKYNRKDRLTAHIKKVHIKGEEGDNPNDASEIDPATGEQIQKPPLEKKYLCAFCGRAVTSSSNLIIHMRRHTGEKPFKCDFCDMAFPRSSDLQCHRRTHTGEKPHKCTVCEKAFSRSYKLQTHMRIHSGERPYKCTYCEKSFTQSNDLTLHIRRHTGERPYVCGICGERFIQGTALKNHRTMRGHYEDVEPRKLTILERF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01181325;
90% Identity
-
80% Identity
-