Tfer026366.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tetanocera ferruginea
Gene Symbol
Pxd
Assembly
GCA_958299015.1
Location
OY282642.1:88375895-88387704[-]

Transcription Factor Domain

TF Family
LRRFIP
Domain
LRRFIP domain
PFAM
PF09738
TF Group
Unclassified Structure
Description
LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.8e-108 1.4e-103 347.7 28.3 1 299 31 319 31 320 0.95
2 2 0.21 3.3e+03 -1.5 2.9 219 245 347 373 322 446 0.63

Sequence Information

Coding Sequence
ATGGATACAAATAGTAATGTGTTAGGAAGGCGTAGAATTAATTCGAGAGTTAATGCTGAGGATCAGGCACTAGATCAGATTGCAAAAGAGGCTGAAGCACGTCTCGCAACGCGCAGGCAGGCTCGTGCTGAGGCACGCGAGGTACGCATTCGTGAGCTGGAACGACAACAAAAGAAATTAGAACAAAATGCTGATCGTGTATTTGACATGCATTCAGTGACCGGACTTGATTCCCTGTCGCGATCGCGCCTTGTTGCCGGTATAAGTGGTTCACCGGTTACAAGAGCGAGTTCAATGTCATCGCGTCGCAGCAGTGAAGATTCACTGGAGGAAGAGGGCCGCAGCCTGCGCGACATGCGACACGAACTCAAGGATGTAGAGGACCGTTTTCGAAAAGTTATGATCGCCAATGCGCAGTTAGATAACGAATGCTCTTCAAAAACTTATCAAATACAGATGTTGAAGGATAAGCTTGAGGAGATTTGTGAATCTTATGCGCAATTGCAGCGTGAGTTTAAAGATAAAACGCGTGATTGTAGTGCGCTGAAAAGGAATCACGATAAACTCAATGAAGAGTTGAAGCTAGTGCAAGGACAGCTAGAGGAACGCGATAAGCTGATCCAGGAACAAGGTCTTCTTATAGTGTCAGTCGAAAATATGGACGGGACTGATGCAAAACGCGCTCTAGTCACTGTGGATAATGCGCAGCTGTTGGGTTCAGTGCAAGGTTCACTAGATATACGTCTCAAAAAGTTCAGCGAAGAGAAACAGCAGCTATTAGTCGAAGTACAGAACTTGCAGGAGCAATTGGAAGCGTTTAAATCGCGAGGAGGAAAATCAAACTCTATGAATAGACCCGCTGGCATAGATGACGATGATTACGATGCGCAAAGGGAGGCCAACAAAATCATATCGGACTACAAATACAAATTGCAGAAAGCTGAACAGGAAGTGGCTAGTCTTCAGGCCAGTTTAGCGCGGTCCGAAACGCAAGTAATACGCTATAAGAGCACTGCAGAAGCAGCAGAAAAGGCAGAAGCCGAACTGAAAATCGAACGAAGAAAGTTACAGCGTGAAAATCGTGAGGCTATGGAACGCTTAGAAGAATTAGAGACATCTAACAACCATCTGTTGAAGCGTTTGGACAAATTGAAGAATGCAAAAATACACATTAATATACCAAGAAATGAACGCGCTCTCTTGAACACACTCACTAAAGATGACTTAAGAGTTTTTGTTGAACAAGGTTCTGAATCAGTTCGAAAGGAATTAAGATTAGAAGAAAACCTCCTCAATTCAGCCATAACTGTACAGAATGGAAGTTTGTCGCATAATCAGCTATTAGAGACATTGGCAAATGACAAGACCAAAGGAGATAGTGAGGTGGCTATGCGAATATTGAGATCCAGTCTTTATGCATATAACACAAAGTGTATTGAACACAATATAAGTGGCACAAATTGTAGAGCGTTTTTCAGCGAAAAGTCCATACCAAAGGATACTACGTTGTGGGAAGATTGCAATAAGATTGTGCAAGGACATCGCGATGGACATCATGTCTTACGCAGATTACTGCCTAGCAATTATCAAGATGGATTCTATAGGATGTTTACTGAGGTTAAACTGCCATCTGCTCGACTGATAAGCAGCAAAACTCTACATGGTCAACACACTAACGTGGTGATCGGCAACGAGGCACTCGATGAAGGTGAACGAAATTTGGCGCTTGTGCAGTGGGCCCAATTCATAGAACATGACTTAAGCAAACCCGTGGCTACATCGATGAAAAACGGTGAACCAATTGAGTGTTGTAATCACGAAAACTACAAGTTAGCACCACGGTACCAACATCCCGCCTGTGCACCGCTTATGGACAAGAACCACCAACACAAGCATGGAAGAGAGACATGTTTGAATTACGTACGCAGCGCGCTGGCTGTAGGTTCAACGTGCAATTTTGGTGGTGCCGAGCaactaAATCAAGCTACTGACTACCTTGATCTCTCTCAGCTGTATGGCTATACCAAAGATGAAGAGCAGCTAATGCGAACTTATCGATTTGGCCAAATCAAATCAAGTCAGCCTACTTCGAATCCCACAGAACACTTATTGCCACTTGCAACTAGCACACCAAATGTTTACTGTGCGCTCAAATTGGGGGCGCAAAATGAAAGCTGTTTTATGGCAGGTGATTCACGAGTCAACAGTAATCCTTTTTCCATTGTTTTGTATACCATATTTATGCGATCACATAATCGCATCGCCAACGATTTACATATCCAGCATTCAGAATGGAATGACAATCGTTTGTATAGTATGGCCAAATCCATTAACATCAATATATATCGCCACATAGTTTTGAAAGAATGGTTGCCTGCCGTATTGGGCCAGCATTTGGCAGATAGAATAAATGCCGAAAAACTTCAACGAGATTTTAGCacttcaagtttaaaaatatctaatGAATTCGCGGTTGCCGCTGTACGTTTCTACCTCTCGATGATGCCAAATGTGCTGCATGACTTGGCCGCCAGACCTATTGCAGAAAGTGGCAGCATCACTACTCGACCAATTGACAATaaCGATATTTCACCAAGTCCGAATATTTTTGCTCTGGACGAACAAATGCATAGATCAGGAATTTTATCGAGTGCagagaaattaaataatatactCGAGTCCATTCTACATCAACGTGCTATGAAAATGGACGGCAATTATGCGGAAACTctTATTGAGAACTTTATGGGTACAAATCATCCCAGGCGCGCGGATGCTTTGGCTTTTGATATACAACGCGGTCGTGATCACGGCTTGCAGGGTTATGTTAAATACCTGGAACTCTGTCAGGGAATAACAGTCAGAGGATGGAACGACTTGGACAACTATATAGATGTTAATGATATCGAAAAGTTGCGGACAGCCTATGACAGTTTCAGTGATGTGGATCTCATAGTGGGCGGTATATCAGAGAAGCCCGCAAATGGTTCAACCGTTGGTCCTACATTCACATGCATTTTGGctgaacaattttccaaaattcGTCAATGGCATGAGTTACTTGATATTCAAGCAAAGCTGGACTTGACCGATTCACCATCTTACGAAAACTGGACGGGAGCAGAACTGATTTGTGCCAATTCCCAGTTAAAGAATGtgccgaaaaatatttttaaaatcaactcaGATTTGTAA
Protein Sequence
MDTNSNVLGRRRINSRVNAEDQALDQIAKEAEARLATRRQARAEAREVRIRELERQQKKLEQNADRVFDMHSVTGLDSLSRSRLVAGISGSPVTRASSMSSRRSSEDSLEEEGRSLRDMRHELKDVEDRFRKVMIANAQLDNECSSKTYQIQMLKDKLEEICESYAQLQREFKDKTRDCSALKRNHDKLNEELKLVQGQLEERDKLIQEQGLLIVSVENMDGTDAKRALVTVDNAQLLGSVQGSLDIRLKKFSEEKQQLLVEVQNLQEQLEAFKSRGGKSNSMNRPAGIDDDDYDAQREANKIISDYKYKLQKAEQEVASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKIHINIPRNERALLNTLTKDDLRVFVEQGSESVRKELRLEENLLNSAITVQNGSLSHNQLLETLANDKTKGDSEVAMRILRSSLYAYNTKCIEHNISGTNCRAFFSEKSIPKDTTLWEDCNKIVQGHRDGHHVLRRLLPSNYQDGFYRMFTEVKLPSARLISSKTLHGQHTNVVIGNEALDEGERNLALVQWAQFIEHDLSKPVATSMKNGEPIECCNHENYKLAPRYQHPACAPLMDKNHQHKHGRETCLNYVRSALAVGSTCNFGGAEQLNQATDYLDLSQLYGYTKDEEQLMRTYRFGQIKSSQPTSNPTEHLLPLATSTPNVYCALKLGAQNESCFMAGDSRVNSNPFSIVLYTIFMRSHNRIANDLHIQHSEWNDNRLYSMAKSININIYRHIVLKEWLPAVLGQHLADRINAEKLQRDFSTSSLKISNEFAVAAVRFYLSMMPNVLHDLAARPIAESGSITTRPIDNNDISPSPNIFALDEQMHRSGILSSAEKLNNILESILHQRAMKMDGNYAETLIENFMGTNHPRRADALAFDIQRGRDHGLQGYVKYLELCQGITVRGWNDLDNYIDVNDIEKLRTAYDSFSDVDLIVGGISEKPANGSTVGPTFTCILAEQFSKIRQWHELLDIQAKLDLTDSPSYENWTGAELICANSQLKNVPKNIFKINSDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-