Basic Information

Gene Symbol
ct
Assembly
GCA_958299015.1
Location
OY282643.1:126512946-126516387[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.5e-32 6.6e-28 97.9 0.0 3 77 379 454 377 456 0.96
2 2 7.2e-31 8.7e-27 94.3 0.1 3 76 628 702 626 706 0.94

Sequence Information

Coding Sequence
ATGTCTGACGATCGCATCGCCCACATACTCAATGAGGCCTCATCGCTGATGAAGAATTCCACACCCAATTCGCTGCAACATCTTAAGGAACAACAGCTGCAGCAGCATCATCAGGAGCAACGCCGCGTGCACGAAGAGTCGCACAGCAACGAGGACTCTAAGTCACCGCATCAAACCTGCTCCTCGCCTTTCTACAAAGAACAGCTGAAGCAGCAGCAGGATACTGCAGCCGTTGCGGCCGCCGCAGCTGCTGCTGCCGCCGCTGCTGctcaacaacagcagcatcaacaacagcagcatcagcaacagcagcagcaacaacagcagcaacagcatcgCATGCGTCAGCAAGAGGAAATGACGCAGGATAAGATGGCGCGTCTGTATCAGGAAATCATGGCGCGTGCGCCACGTGAAGCCGCTTTTCCCAGTTTTCTTCTTTCTCCATTTTTCAGCGGTGGCATGCCACCAGCTGGCATGCCGAATCAAGCATTCCCCGCCGCCGCCGCAGCTGCCGTTGCTGCCGATGAAAACATACGCCTGGCCTTCGAACGTGAAATGGCCAAAATGCAACAGCAGCCAAATCCCGGCAACATACCGAGCTTCCCCAACTTTTCCAGCCTCATTGCGCTGCAGCAGCAGGTGCTGAACGGCGCTCAAGACTTGTCGCTGACCAAAGATCCCAAGGATATTAAGCTAAATGGACAGCGCAACGCGCTTGATCACTCCTCCAATTCCATGGATGCGCCTGCTGGCGGCAATTCACAGTCGGCAAATAATGCCAAAGATGTCGCCGATGCCGAACGTCATGCTAGTGCCGCCTTTCAGCTGCATGCGCGCAATGCCAGCATCAAGTCGGAAGGCGGTGGCAGTCATACGCCCGCACCACCCTCCAGCAATGCTTCGGCTCAGAACAACAACTCAGCTGCGCCCAGTCCACTAAGCAATTCCATACTGCCGCCCGCCATGACACCCACGGATGACTTTTCCGCCGCCGCCAGCCCGCTGCAACGCATGGCCTCTATAACCAACTCGCTCATCACGCAGCCACCTGTTACGCCGCATCACTCGCAGCCACAGCGTCCCACCAAAGCTGTCTTGCCGCCCATAACACAGCAGCAATTCGACATGTTCAACAATCTGAACACCGAGGACATAGTGCGACGCGTCAAGGAAGCGCTCTCGCAGTATTCCATCTCACAACGTTTGTTTGGCGAATCTGTTCTGGGACTCTCACAAGGTTCGGTCTCAGATCTGCTGGCACGTCCCAAGCCCTGGCACATGCTGACACAGAAGGGTCGTGAGCCTTTTATACGCATGAAAATGTTCCTTGAGGATGAGAATGCTGTGCATAAGCTTGTGGCTAGCCAGTACAAAATTGCACCCGAGAAGCTAATGCGCACTGGCAGCTATAGTGGCAGCCCGCAGATACCACAAGGTTTGGCCAGCAAAATGCAAGCCACGCTGCCCATGCAGAAAATGATGAACGAGCTGAAGATGCAAGAGCCACAGGCACAACATATCATGCAGCAGATGCAGGCTGCCGCCGCCATGTCGGCTGCcatgcaacagcagcaacagaacCATCAGCAACAAGCCGCCGCCGCAGTGCAGGCAGCTCAAGCTGCTGCCGCTGCACAGCATCATCATAGCATGCTGCTAACTTCACCTGGTCTGCCACCACAGCATGCTATTAGCTTGCCTGCAGCTGCTGCAGCAGCAAATGCCGCAGCGGCTAATGCTGCAGCCGCCAATGCAGCAGCAGCTGCCAATGACAAGAAGCCTATGATGATGCCCATACATTCACCGCATCAGGCCAATACCATGCGCAACATGCATCAGCATATGTCACCCACCGTCTATGAGATGGCAGCGCTGACGCAAGACCTCGACACACAGGTGATAACCACCAAAATCAAAGAAGCTTTACTGGCCAACAACATAGGACAGAAGATATTCGGTGAGGCCGTGCTTGGACTGTCACAAGGTTCAGTTTCGGAGCTGCTTAGCAAGCCGAAACCCTGGCACATGCTGTCCATCAAGGGACGCGAGCCATTTATACGCATGCAGCTGTGGCTCTCCGATGCCAACAATGTTGAGCGTCTGCAGATCTTGAAGAATGAACGACGCGAGGCCAGCAAACGACGTCGCTCTACCGGCGGTCCCAATCAGCAAGACAACAGCTCGGACACTTCGAGCAACGATACCAACGACTTCTATACCAGCAGCCCAGGCCCTGGCTCCGTAGGTTCCGGCGTCGGTGGCGCACCACCTAATAAAAAGCAGCGTGTGCTCTTTTCCGAAGAGCAAAAGGAAGCGCTACGCCTGGCTTTTGCTTTAGATCCCTATCCAAATGTGGGCACCATAGAATTTTTGGCCAATGAGCTGGGTCTGGCTACGCGCACCATAACCAACTGGTTTCACAATCATCGCATGCGCCTGAAGCAGCAAGTGCCGCATGGACAGCCTGCCGACTCGCACATACCCAGCCGTGAGAATACCAATGCCACGCCCTTTGATCCCGTCCAGTTTCGCATCTTGCTGCAGCAGCGGCTGCTCGAGTTACACAAAGAGCGCATGGGTCTGAGTGGAGCACCGACGCTGCCCTATCCGCCGTACTTTGCCGCTGCAGCGCTGCTGGGACGCAGTCTGGCCGGCATGCCTGGTGCAGGTGGTGCTGGTGGCGAGCCAGATTTGCATGCGCTGAATCAGGCCTTCAAAGAGCAAATGAGTGGCTTGGATTTGACAATGAGCGCTTTGAAGCGTGAGCGCACAGATGACTTTGACGATGAGCTGGATGCAGCATCGCATCTCAGCGACAATGAATCGCTCGATGGTACGGGCGAAGGTGGCTCATCGTTAGGCGGCGGTGATGACAAGCGCGACGAGTTCAAGGAAACGCCGCGCTCTTCATATGCGGCGGCCAATGCGCGCACATCGCGACGCAAGCTGGCTGCGCCGCAGTGGGTGAATCCAGCCAATAGCGGCGACAATGCAGCAACAGCCAGTGCCGTGGCTGCAGCGGCAGAGCGCATTATCAATGGTGTTTGTGTCATGCAGGCGGCAGACTTTAGTCGTCGCGCCGAGGATGAAGCGGCAGCAGAATCACAGTCGCGTGCAGACAGCGAAAAACCGGACAGTGAGCTGCATGATGTGGACATCGATCAGCGTTTCATGGAACCTGAAGTACGCATCAAACAGGAGGAAGATGATTGCGAGAGTGAGTCAGAAACAGGTGCTGCTGCCCGCGACGAACAGAAAGAGGCAGCAGCAGCGATGGAGGAAAAGCTGCGCATGGTACGCGTGCAGCGCATGAGTGGCGAAGAGGAGCCAGCGCCGACTGCGTGGAACTATTAG
Protein Sequence
MSDDRIAHILNEASSLMKNSTPNSLQHLKEQQLQQHHQEQRRVHEESHSNEDSKSPHQTCSSPFYKEQLKQQQDTAAVAAAAAAAAAAAAQQQQHQQQQHQQQQQQQQQQQHRMRQQEEMTQDKMARLYQEIMARAPREAAFPSFLLSPFFSGGMPPAGMPNQAFPAAAAAAVAADENIRLAFEREMAKMQQQPNPGNIPSFPNFSSLIALQQQVLNGAQDLSLTKDPKDIKLNGQRNALDHSSNSMDAPAGGNSQSANNAKDVADAERHASAAFQLHARNASIKSEGGGSHTPAPPSSNASAQNNNSAAPSPLSNSILPPAMTPTDDFSAAASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLASKMQATLPMQKMMNELKMQEPQAQHIMQQMQAAAAMSAAMQQQQQNHQQQAAAAVQAAQAAAAAQHHHSMLLTSPGLPPQHAISLPAAAAAANAAAANAAAANAAAAANDKKPMMMPIHSPHQANTMRNMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQILKNERREASKRRRSTGGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSGVGGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPADSHIPSRENTNATPFDPVQFRILLQQRLLELHKERMGLSGAPTLPYPPYFAAAALLGRSLAGMPGAGGAGGEPDLHALNQAFKEQMSGLDLTMSALKRERTDDFDDELDAASHLSDNESLDGTGEGGSSLGGGDDKRDEFKETPRSSYAAANARTSRRKLAAPQWVNPANSGDNAATASAVAAAAERIINGVCVMQAADFSRRAEDEAAAESQSRADSEKPDSELHDVDIDQRFMEPEVRIKQEEDDCESESETGAAARDEQKEAAAAMEEKLRMVRVQRMSGEEEPAPTAWNY