Basic Information

Gene Symbol
ct
Assembly
GCA_943737955.2
Location
OX031314.1:26930746-26934160[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.9e-32 5.6e-28 97.9 0.0 3 77 385 460 383 462 0.96
2 2 9e-31 7.3e-27 94.3 0.0 3 77 615 690 613 692 0.96

Sequence Information

Coding Sequence
ATGCCCGACGATCGCATCGCTCACATCCTCAACGAAGCCTCGTCGCTCATGAAGAACTCTACACCGAACCCGCTGCAGCAGCTCAAAGAGGAGCAGCATCGGCAACTGCAGCATCATCAGGAACAACGACGCGCTCACGAGGACTCGCGCCTCAGCAACGAAGATTCCAAGTCGCCTCACCAGTCCTGCTCCTCGCCGTTCTACAAGGAGCAGCTCAAGCAGCAGCAGGACTCTGCCGCTGTTGCCGCCGCCGCTGCAGCTGCTGCCGCTGCGGCTGCccaacatcaacatcagcagcagcagcagcagcatcagcaacaccaacagcaacaacaacatcaacagcagcagcagcgcaTGCGTCAGCAGGAGGAAATGACGCAGGACAAAATGGCGCGCTTGTATCAGGAAATCATGGCCCGAGCTCCCCGCGAAGCCGCTTTTCCAAGTTTTCTTCTCTCTCCGTTTTTCAGCGGTGGCATGCCACCAGCTGGTTTGCCGAACCAAGCATTCCCCGCCGCCGCAGCGGCCGCCGTCGCCGCCGATGAGAACATTCGACTGGCCTTCGAACGCGAAATGGCCAAAATGCAGCAGCAGCCGAACCCTGGCAATATACCGAGCTTCCCCAACTTTTCCAGCCTCATCGCCCTGCAGCAGCAGGTCTTGAATGGCGCCCAAGACTTGTCGTTGACCAAAGATTGCAAGGATCTGAAGTTGAATGGACAACGCGGCACTCACGATCACTCCTCCAACTCCATGGATGCGCCCACGGGCGGCAGCATTCAGTCGGCTGTGCAAGCAGCCAACGCCAAAGAAGCATCCGCCGAGGCGGAACGGCATGCAAACGCCGCCTTCCAAATGCACGCGCGCCTCAAAGGTGAAAGCGGCAGCCACACGCCAGCCCCAGCTTCCAGCAACGCTTcgacacaaaacaacaactcgGCAGCGCCCAGTCCGCTGAGCAACTCTATTCTTCCGCCCGCCATGACGCCCACGGACGACTTCTCCGCCGCCGCAAGTCCGCTGCAACGCATGGCCTCCATCACCAACTCGCTGATCACACAGCCGCCTGTCACGCCGCATCACTCGCAGCCGCAACGCCCCACCAAAGCCGTGCTTCCGCCCATCACTCAGCAGCAGTTCGACATGTTCAACAACCTCAACACCGAGGACATCGTGCGGCGCGTCAAGGAAGCGCTCTCGCAGTACTCGATCTCGCAGCGCCTCTTCGGCGAGTCCGTCCTCGGTCTGTCGCAGGGATCCGTCTCCGACCTGCTAGCGCGCCCCAAACCCTGGCACATGTTGACGCAGAAAGGTCGCGAGCCCTTCATTCGCATGAAGATGTTTCTGGAGGACGACAATGCGGTGCACAAGCTGGTCGCCAGCCAGTACAAAATCGCCCCCGAGAAGTTGATGCGCACCGGCAGCTACAGCGGCAGCCCGCAGATCCCACAGGGGCTGGCCAACAAGATGCAAGCTACGCTGCCCATGCAGAAGATGATGAACGAGCTGAAGATGCAGGAGCCGCAAGCACAACATATCATGCAACAGATGCAGGCAGCTGCTGCCATGTCGGCGGCCatgcagcagcaacacaacCACCAACAGCAAGCAGCAGCTGCAGTGCAGGCCGCTCAAGCTGCCGCTGCTGCCCAACACCAGAGCATGTTGCTCACTTCACCCGGACTGCCGCCACAACATGCCATTAGTTTGCCCGCAGCCACTGCAGCCAACGACAAAAAGCCCATGATGATGCCGATAAACTCGCCGCATCAATCCAACACCATGCGCAACATGCACCAGCACATGTCACCCACCGTCTACGAGATGGCAGCACTGACGCAGGACCTCGACACTCAGGTGATTACCACCAAGATCAAGGAAGCGCTGCTGGCCAACAACATCGGCCAGAAGATATTCGGCGAAGCCGTCTTGGGTCTGTCGCAGGGGTCTGTGTCGGAACTGCTAAGCAAGCCCAAGCCATGGCACATGTTGTCGATCAAAGGACGCGAACCGTTCATCCGCATGCAGCTGTGGCTTTCCGATGCCAACAACGTGGAGCGCCTGCAGGTGCTCAAGAACGAACGTCGCGAGGCCAGCAAACGACGTCGCTCCACCGGCGGCCCCAATCAGCAGGACAACAGCTCGGACACCTCGAGCAACGACACCAACGATTTCTACACCAGCAGCCCGGGTCCCGGTTCTGTGGGCTCGGGTGTGGGTGGTGCACCGCCCACCAAGAAACAGCGAGTGCTCTTCTCCGAGGAGCAGAAGGAAGCGTTGCGCCTCGCTTTCACGTTAGACCCCTACCCGAATGTGGGCACCATTGAGTTCCTGGCCAACGAACTGGGCCTGGCTACGCGCACCATCACCAACTGGTTCCACAACCATCGCATGCGCCTCAAGCAGCAGGTGCCGCATGGCCAGCCCGCCGACACGCACATTCCCAGCCGCGAGAACACCACCGCCACGCCCTTCGACCCCGTTCAGTTCCGCATTCTGCTGCAGCAACGTCTGCTCGAGCTGCACAAGGAACGCATGGGCCTGAGCGGCGCGCCAGTGTTGCCCTATCCGCCCTACTTTGCCGCAGCGGCGCTGCTGGGACGCAGTCTCGCTAGCATGCCAGGGGCGGGGGGAGCCGGCAACGAACCGGATCTGCAAGCTTTGAATCAAGCTTTCAAGGAGCAGATGAGCGGCCTCGACCTGACGATGAATGCGTTGAAGCGCGAGCGCAGCGACGACTTTGACGATGAGATGGACGAGACTTCGCATCTGAGCGACAACGAATCGCTCGATGGCAATGGCGAGGGAGGTTCCTCGATTGGAGGCGGCGACGACAAGAGGGATGAATATAAAGAGACGCCGCGATCGTCGTACCCCGGAAATGCGTCGCGTACTTCACGCCGCAAGCTAGCAGCACCGCAATGGGTCAATCCGGCGAACAGCGGTGAGAACACAGCAGCGGCGGCGgcagctgcagcagcagcaaacgCGGTGGCCGCGGCTGCCGAACGCATCATCAACGGCGTGTGTGTCATGCAAGCGGCAGACTTTAGTCGGCGAGCCGAGCAGGAAGCCGCAGCAGAGCCACAAACGCGGCCCGAAAGTGAGAAGCTGGAAAACGATATGCATGAGGTGGACATCGATCAGCGCTTCATGGAGCCAGAGGTGCGCATAAAGCAGGAGGATGAGGAGTGCGAGAGTGAGATGGAGGCGAATGCGAATGCAATCTTGAGACATGAAGACAAAGCGTTGGACGACGAAAGACGGCGAATGTTAGGAGTGCAACGGATGAGTGACGAGGACGAAGCAGCGCCGACAGCGTGGAGTTATTAG
Protein Sequence
MPDDRIAHILNEASSLMKNSTPNPLQQLKEEQHRQLQHHQEQRRAHEDSRLSNEDSKSPHQSCSSPFYKEQLKQQQDSAAVAAAAAAAAAAAAQHQHQQQQQQHQQHQQQQQHQQQQQRMRQQEEMTQDKMARLYQEIMARAPREAAFPSFLLSPFFSGGMPPAGLPNQAFPAAAAAAVAADENIRLAFEREMAKMQQQPNPGNIPSFPNFSSLIALQQQVLNGAQDLSLTKDCKDLKLNGQRGTHDHSSNSMDAPTGGSIQSAVQAANAKEASAEAERHANAAFQMHARLKGESGSHTPAPASSNASTQNNNSAAPSPLSNSILPPAMTPTDDFSAAASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMQATLPMQKMMNELKMQEPQAQHIMQQMQAAAAMSAAMQQQHNHQQQAAAAVQAAQAAAAAQHQSMLLTSPGLPPQHAISLPAATAANDKKPMMMPINSPHQSNTMRNMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSGVGGAPPTKKQRVLFSEEQKEALRLAFTLDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPADTHIPSRENTTATPFDPVQFRILLQQRLLELHKERMGLSGAPVLPYPPYFAAAALLGRSLASMPGAGGAGNEPDLQALNQAFKEQMSGLDLTMNALKRERSDDFDDEMDETSHLSDNESLDGNGEGGSSIGGGDDKRDEYKETPRSSYPGNASRTSRRKLAAPQWVNPANSGENTAAAAAAAAAANAVAAAAERIINGVCVMQAADFSRRAEQEAAAEPQTRPESEKLENDMHEVDIDQRFMEPEVRIKQEDEECESEMEANANAILRHEDKALDDERRRMLGVQRMSDEDEAAPTAWSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01414745;
90% Identity
iTF_01426559;
80% Identity
iTF_01022893;