Tscr010025.1
Basic Information
- Insect
- Tenthredo scrophulariae
- Gene Symbol
- nfxl1
- Assembly
- GCA_963978835.1
- Location
- OZ022229.1:21919092-21922157[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1.1 1.7e+04 -3.2 1.1 15 19 126 130 125 130 0.81 2 19 1.1 1.8e+04 -3.3 2.8 4 10 161 167 158 167 0.86 3 19 3.9e-08 0.00062 20.5 17.2 1 19 175 192 175 192 0.99 4 19 7.4e-09 0.00012 22.8 15.7 1 19 228 246 222 246 0.86 5 19 1.4 2.3e+04 -3.7 1.1 10 14 253 257 251 257 0.71 6 19 0.73 1.1e+04 -2.7 0.8 5 10 270 275 270 275 0.86 7 19 0.046 7.2e+02 1.1 8.6 1 18 281 299 281 300 0.88 8 19 1.7 2.7e+04 -3.9 0.7 6 10 325 329 324 331 0.58 9 19 7.8e-06 0.12 13.2 9.8 1 18 335 352 335 353 0.97 10 19 0.26 4.1e+03 -1.3 0.2 1 5 362 366 362 368 0.95 11 19 0.0034 53 4.7 8.0 1 12 387 398 387 398 0.94 12 19 0.041 6.5e+02 1.3 1.0 4 10 406 412 405 412 0.97 13 19 8.6e-08 0.0014 19.4 14.6 1 19 418 436 418 436 0.93 14 19 0.00017 2.7 8.9 8.9 9 19 484 494 482 494 0.90 15 19 0.015 2.4e+02 2.7 5.8 1 12 504 514 504 514 0.95 16 19 1.2 1.9e+04 -3.4 6.7 14 19 543 548 543 548 0.90 17 19 7.8e-05 1.2 10.0 3.1 1 11 584 594 578 595 0.90 18 19 0.0001 1.6 9.6 13.5 3 19 624 640 623 640 0.92 19 19 5.4e-05 0.85 10.5 11.8 1 16 685 699 685 705 0.88
Sequence Information
- Coding Sequence
- ATGAGGAAATTCAAAAGAGCCCAGGCTCAAAATCAAGCGGCGATCGAAAGGCACATGGAAACATATCCATTGGTAGAATCGTCTAGCGACGAAGAGGATGAAACTGGGCAGGAAATATTGGAAAAAGCTGTTGGCAAGGTTCTAACTTCTTATCAAGATCAAGGAGgagattctgaaaaaattctatctTATCTAGAAGATACTTTTCAATCTAACGGAGCAGTTTGTCTAATATGTATTTCCTCTGTCAAGAAAACAGACTCGATATGGAGCTGCGGGAGATGCTATTCATTCATGCATCTACCCTGCATTCAACACTGGATTCGAGACAGTTTAACTTACAAACGAGATCGAggaatttctcaattttggGCATGTCCAAAATGTCGTACGGAGTACGAGGAAGCCGAGGCTCCAAAAGACTACGAATGTTTTTGTGGAAAGACGAGAGATCCGCCCTACCAGCCATGGTGTGTACCCCATTCCTGTGGCGAAGCTTGCGGAAAGGATCTTCAACCAAAATGTGGTCATACATGTGTCCTGCTTTGTCATCCCGGGCCTTGTCCTCCTTGCCCCAAGATGGTTTCCTCCAAATGCTACTGTTCCAAACAGTCACCACAACCGAGACGATGTAACGCGAAAGAATGGAGCTGTGGAGCAATTTGCGGGAGAGATTTAAAGTGCGAGAAGCACACCTGCAAAGAGACTTGTCATTCCGGAGACTGTCCACCCTGTCCGGAAAAGATTTCTGCATCTTGTCACTGCGGGAATAAAACTGAGATGAAATCCTGCTTCGATTCCATTTGGCGGTGCGATAAACCTTGCAAAAAGCTTCTATCGTGCAACGTTCATATCTGCCAGGGCGTTTGCCATCTGCCGGATGATTGTGGAGACTGTTTGACTGCTAGGAACAGAACTTGTCCATGCGGTAagataaaatacaaaatatctTGTAAGCAGGAAGCATCTACCTGCGGAGATACGTGCGAGAAATTACTAGACTGCGGATCGCACTATTGCAACAAACGTTGCCATGCTGATAGCTGCGGTCAATGCTTAGAAGTTGTTACTAAGTCTTGTAAATGCGGTTCTCATAAGAAAGAGATAGCTTGTGCCAAGGTATTCCACTGCGACACTAAATGCAAGCAGATTAGACTCTGCGGCAGACATCCGTGCAACAAGAAATGCTGCGATTGTGtaaaaaagaacaattttcACGCCTGTGAAAAGACTTGCGATCGAACTCTCAGCTGTCGTAAACACAAATGCTCTGCCCCTTGCCATAGCGGTCCTTGCTATCCATGTCCAAGAACAGATACGATACAGTGTCGCTGTGGTTCAAGCAAAATTGTAATTCCCTGCGGTACggcaaagaaaataaaacctCCTCACTGCAATAAGATGTGCAAGATACCCCCGATTTGTCACCATCCAAAAAGAGAGTCTCACAAATGTCATCAGGGACAATGTCCACCTTGTAAGAAACAGTGCGCTTTAACGCACAAGAAATGTGGCCACATTTGTCCAGCGTCTTGTCATACCAAAGTCTGGGTAAAAGTTAACGGCGTTACTCAACCCGCAGGGCCGTGGGAGAAACAAAAAGATAAAATGCAGCTCAAAACTCTGCCTTGTCCGCCCTGCCAAGTCTCAGTGATGGTTACCTGCTTGGGTGGGCATGAGACTTTACCTTGGCCTTGCCATAGAGCTATATCAAGCTCTTGTCAGAGAGAGTGTGGCCAGGTTTTGAACTGCACTAATCATACGTGCACGTTTTTATGCCACGTTGTTGAAGCCGCGGGAGATACGGGGGATGCAACTGTTTGCGAGGAGTGTGTGAAGCCTTGCGTTATTCCTAGGCCTGAAGGATGTACTCATGCTTGTCCTAGCGTCTGCCATAAAGCTCCGTGCAGACCTTGTAAACACATCGTTAGACTACCTTGTCATTGCGCTATAAATAGCTTGTATATTAGATGCTCCGAACTTACTTCTGCGAATCTGGAGACTAGGAGAGAGATGTTCAAGTGCGGCAATCAGTGTCCTAAAAATTATCCATGCGGGCATCGGTGTGCAGAGGATTGCCACCCGGGAACATGCGACGGTGCGGAAAATTGTAAtaagaaagtaaaaatttgGTGTAAATGTAAGAGATTGAAGAAAGACTTCTCGTGTATTGTTGTAAGATCGGGAGAGGCTGTTGTCGAGTGTGATGATGTTTGTcaggagaagaagaaagagagaattcAAACTCAAGAGGCTGAGGTAGCAAAGAAAAGGAGAGAGGAAGAACTACGGAACCAACGAGAGGTCgaaaagtttgaaagaaaatttaaacctAGACGTAAATGTAAGGACAAATCATTAGACGAACCACAAGTTAAGGAAAGAAAACTTGGTTTTATAATATGGCTCGCAGCTATATTCGTAATCGCCATAGCTGCTCTAGTCACTTTTTACAGTGTCCAGATATAA
- Protein Sequence
- MRKFKRAQAQNQAAIERHMETYPLVESSSDEEDETGQEILEKAVGKVLTSYQDQGGDSEKILSYLEDTFQSNGAVCLICISSVKKTDSIWSCGRCYSFMHLPCIQHWIRDSLTYKRDRGISQFWACPKCRTEYEEAEAPKDYECFCGKTRDPPYQPWCVPHSCGEACGKDLQPKCGHTCVLLCHPGPCPPCPKMVSSKCYCSKQSPQPRRCNAKEWSCGAICGRDLKCEKHTCKETCHSGDCPPCPEKISASCHCGNKTEMKSCFDSIWRCDKPCKKLLSCNVHICQGVCHLPDDCGDCLTARNRTCPCGKIKYKISCKQEASTCGDTCEKLLDCGSHYCNKRCHADSCGQCLEVVTKSCKCGSHKKEIACAKVFHCDTKCKQIRLCGRHPCNKKCCDCVKKNNFHACEKTCDRTLSCRKHKCSAPCHSGPCYPCPRTDTIQCRCGSSKIVIPCGTAKKIKPPHCNKMCKIPPICHHPKRESHKCHQGQCPPCKKQCALTHKKCGHICPASCHTKVWVKVNGVTQPAGPWEKQKDKMQLKTLPCPPCQVSVMVTCLGGHETLPWPCHRAISSSCQRECGQVLNCTNHTCTFLCHVVEAAGDTGDATVCEECVKPCVIPRPEGCTHACPSVCHKAPCRPCKHIVRLPCHCAINSLYIRCSELTSANLETRREMFKCGNQCPKNYPCGHRCAEDCHPGTCDGAENCNKKVKIWCKCKRLKKDFSCIVVRSGEAVVECDDVCQEKKKERIQTQEAEVAKKRREEELRNQREVEKFERKFKPRRKCKDKSLDEPQVKERKLGFIIWLAAIFVIAIAALVTFYSVQI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01303874;
- 90% Identity
- iTF_01303874;
- 80% Identity
- -