Basic Information

Insect: Tenthredo scrophulariae
Gene Symbol: salm
Assembly: GCA_963978835.1
Location: OZ022227.1:34551866-34562908[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 5.9e-06 0.00073 20.6 0.9 1 23 458 480 458 480 0.98

2 9 1.2e-05 0.0014 19.7 2.1 1 23 486 508 486 508 0.98

3 9 0.073 9.1 7.7 3.8 2 23 890 911 889 911 0.98

4 9 5e-08 6.3e-06 27.1 0.6 1 23 917 939 917 939 0.97

5 9 7e-05 0.0088 17.2 2.6 1 23 949 971 949 971 0.98

6 9 0.0024 0.3 12.4 1.9 2 23 1315 1336 1314 1336 0.97

7 9 0.05 6.2 8.3 1.5 1 15 1342 1356 1342 1356 0.93

8 9 1.2e-06 0.00015 22.8 2.1 3 23 1579 1599 1577 1599 0.96

9 9 2.3e-07 2.9e-05 25.0 0.9 1 23 1605 1627 1605 1627 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	5.9e-06	0.00073	20.6	0.9	1	23	458	480	458	480	0.98
2	9	1.2e-05	0.0014	19.7	2.1	1	23	486	508	486	508	0.98
3	9	0.073	9.1	7.7	3.8	2	23	890	911	889	911	0.98
4	9	5e-08	6.3e-06	27.1	0.6	1	23	917	939	917	939	0.97
5	9	7e-05	0.0088	17.2	2.6	1	23	949	971	949	971	0.98
6	9	0.0024	0.3	12.4	1.9	2	23	1315	1336	1314	1336	0.97
7	9	0.05	6.2	8.3	1.5	1	15	1342	1356	1342	1356	0.93
8	9	1.2e-06	0.00015	22.8	2.1	3	23	1579	1599	1577	1599	0.96
9	9	2.3e-07	2.9e-05	25.0	0.9	1	23	1605	1627	1605	1627	0.98

Sequence Information

Coding Sequence: atgcagcTGATGAGATGGTCCATTACCAGAAGACTGGTACGACGAGGTGATAAACAACGGTCAAGGGAAACCTCGTTGTCAGCTGAATCATTCTGTCATCGATCTACCGCTGCCCCAAGTACTACCGGCGAGGGAAACGACTCCGGATCCGAGGGCGAGGAGAGCACCGGCGTTGGAGTCGGTGTGGTCGGCGTAAGCCTTGGCGAAGAAGCTGTCGATCTTACATCGGCTCGTTCTCACCATGGGGACGAGGACGATAGAGACGATCGAGGAGCTGACGATTTGCCAATGGATGAGGACTACGAGGACGGCGTTGAGGAGGCCGTCGAATCTCACGAGGacgacgaggaggaggaggaggaggagggcACGCGGAAGCAAATACGTCATCGTCAGGACGCCGAGAATAACAACAGCTTTTCCGAAGGCGGTGGGCAGACTACAACGGGAATATTCCCACCGGCGGGTGCCAGCCACGTCACCCTCGAGGCATTACAAAACACAAAAGTCGCGGTCGCACAATTCGCTGCGACCGCTTTAGCCGGAGGTGCAGACAGCGAGGCGGCACTCCAGGACCTTGCCCTGCTACAGAGCACCTTATACACTCTACAGCATCAGCAGGTCTTTCAACTCCAACTGATAAGCCAGCTGCAGCAACAGTTATCGATAACTCACAACCAGCCGGCGTCTGCTTCTGGCACCCATTCCACAACCGGTGAAGGAAATCCATCCCAAGATGGTATTATCGCCAAGGAGGGATCCCCGTCGCCGAGCATCCACCCGAAGCCCCTTTCCGCCTTGACGTCACCACCCGAATCCCGACCTCCCAGTCACCACCAGCACACAACGTCGCCTTGCCCGTCAACGCCGATCAGCATGTCGCAGGAACTCGCACTTCCACCTTCGAGCGGTTCGCCACTCGGACTACCGCTCCAGGCATCTACGGGTATCAACGTTCCTGCGACTGTTGGGGTCGGCGTTGGCACAAGCACGGGTACGAGTACGGGCACGGGCACGGGCACGGGCGCGGGTACGGGCGGTGGAAACGTTATACAGACGACAAACGTCGTGAGTCAACAGACCAATGGAAGCAACAGTCATATGTCGCTTTCTCATCAAATGCCCTCGCTATGCTCTATTAGTTCGTCGCTAGCTTCGACTATAATAACGAATACCGACCCTCCGCCACTCCACGAACCAAACACACTGGAAATGCTCCAGAAACGGGCTCAGGAAGTACTCGACAACGCGAGCCAGGGACTACTGGCAAATAACCTTGCCGACGAGCTAGCCTTCAGGAGCGGAAAGGGCTCGAGATTATCACCGTATGATTCGAAGTCGGGAGGAGGTCGGGGCGAGCCATTCTTCAAGCACCGATGTCGCTACTGTGGCAAGGTCTTTGGCAGCGATTCGGCACTCCAGATACACATCCGATCACACACAGGTGAGCGACCCTTTAAATGCAACGTCTGCGGAAGCCGATTCACCACCAAGGGAAACCTCAAGGTTCACTTCCAGAGGCACACGGCCAAGTTCCCCCACGTTAAAATGAACCCGAATCCCATACCCGAACACCTTGACAAATACCATCCCCCGCTACTACAGCAATTGGCTGCCCCCGGACAGAGGCAGCTCACATCACCACCCCCATCGGCTCCGCATCATCCGCCTTTTCATCCGGCTGCTGCCCACGGATTCCTTCCGCCCCAGCCACCCTTACCTCTAACCCTAGCCCTGCCCGGTATGCCACCCCTCTACCGAGCCCCGGTAACGGTCAACCACTCCAGGGACGAGCAAGAGGTACCGGAGAACCTGAGCAAGCCGGTGGTAGGCGCCGCGATTTCAACCCCTTCACCCAGATCCCCAATAACCCATTCGAATTCGCATCATTCCTTTCACGACCATCAGCTGCACCAAAAACACCAGCAGCATAACGCGCCGGGCAGCCACGAGATGAGACTAGAGACTGCGAGGTCGCCGAATACGGCCCTCCAGGAGTCGCCCACGGATTCTTATCGGCCTGCGAGACCCACGAGTCAAGAGGACGGCGCCAGGGAACGAGTTACGCCTAAACGAGAACCCGAGGAAGCCGAGGAGACCGCGGAAGAGGAAATAGACGACTACGAAGAGACGAGACGGTACCTTTGCGCCTCGCCACAGTCCACGGTCAATCTTAATCCAATCTCTCAGGCTCAGCCTTACGAAGACTGCAGTATGGACAGCAAGATGAGCGGACGTCTAGACGGAGACGGTGAAATGGAGGGAGACGAAGAGATGGAAGAACAACCGGAGAACCTTTCCAGCAGAGGAGCTACCGGGCGTTTGGCACATCAGACTATCGGATACCCGGGTGCTTCGCCGGCGAGTAGTAGCGCGAGTAGCGGAAGCCTGCAGACGTCTTTTGCCGGTATTTTGTTCCCCGGTCCGCCATCTCACCACCAATTACCTCACCACCATTCGTCGATTGGACCGACAACCCCGACCGGTCCGTCCGGGGAAATGatggttgatcctgccaggGACCCGGCGATATATTCGAGCCTTTTACCGAGGCCTGGAAGCAACGATAACTCGTGGGAAAGTCTCATAGAGATAACCAAGACCTCGGAAACTTCGAAGCTTCAGCAGCTGGTGGACAACATTGAACACAAACTCACGGACCCGAATCAATGCGTTATCTGCCACCGCGTATTGTCCTGCAAAAGTGCCCTCCAAATGCACTACAGAACACACACTGGCGAGAGACCTTTCAAGTGCAAGATTTGCGGTCGAGCATTTACCACGAAAGGGAACCTCAAGACTCACATGGGCGTTCATAGAGCCAAACCACCGCTCAGGGTACTCCACCAATGTCCCGTTTGCCACAAGAAATTCACAAACGCCCTAGTCCTTCAACAACATATCCGTCTCCATACCGGCGAACCCACAGATCTGAGTCCCGAGCAAATCCAAGCCGCTGAAGTAAACGAGTTTCCATCCGGCTACCCGCACCATCCTCTAGCCTCGTTTCTCCCCCAGGGTTTTCCCTCTCTCCATCCAGCAGCGGGGGCCGGCTTCGCCCTGGGGTTTCCTCCGTCGAGGGGACAACAACACCTTTCGGAACGTCACGACAATCATTTAGACGGTAAAGAATCTCGGCAGCACCACTTACAccatcatcaccatcaccatATCCTccaacaacaacaacaccACCAAGAGAGATACCTCGACGAACAGGGCGACGACATGGACGATCAGGACGACGAGGACGAGGGCAGAGAGGATGACGACAGGTGCGACGAGGCTAGGGAGAGACAAAGCGCCGACGGTGACGACAGGGATGGTACCGAGGATATACACGAGGATATTGAACGGCGGAGACTTCACTCGTCGGCGCCGTTGTTCTCCACGTCTTTGGCGGCCCTAGAGAATCAAGTACGCACGATAACCACGACGTGCGCAAACAGCGTCGCTAATAATTCTAGAATTTTGTCGTCGCCGCCTCATCCTTCTCATCAGTACAATGGCAACGACAAAACTGACAGTCCGCCTTGCAACGCCGGTGGCGGTACTCCTCTCGATCTCACGCCAAGGGCCTCGTCGACGCCGGCTGATACCTCGACGTCGACACCTAACGCCACACCTCCGCCCCAGCCACAGCTACAGCTacagccacagccacagccacaTCTAGGCACGCACCATCCTCAACCGCCAAATCCGTTCGGTATGTTCGCTGGTCTACTCCAGGCAGTTTCATCGCCGCCTTCGACTAGCTCTATGAACAGCAGCGTTACCGGTGTTAACAGCATAGCTACTATGAGCACGACAAGCAACCCTGGCAGTGGTGCAGGGAGCGGTCCACTCGCCTCGTTAACGACGTCCGCAGTCCTCGCTGCCACTTCCACTTACAACCCGCTCGGCCTAGCTGTCGGAGGGCCAGCAGTCCGTGGAAATACAACGTGCAATATCTGCTACAAGACATTCGCGTGTAACTCAGCCCTGGAGATACACTATCGAAGCCACACCAAGGAACGACCTTTCAAATGCACCGTGTGTGATAGAGGATTCTCAACTAAGaCCAACGGTTCGTGGGAGGACGTCTGTTCCTGCGCGAACCAAAGGAACCCTTTTCTGACCAACATCACTGCCACAACCACAACCATCACCTCTACCACCACAACCACAACCACCAATACCACAATCCACACTAGCCCCCAATACAACCTTCAACCACCACCacaaccaccaccaccaccaccaccacggTCACCCATCAGCAACCACGAGAGGCCCAAACGTAGGCGGCGGCGGCCTGAGGATAGGAAGAGCCGGGGGCGGTCTGGGTCCGGAGGGGGGCGGCATCTGACATATGCTCCCGTCCGTCTGCCCCCGCTACTGCCCCCCGCCCTCGGGCTTCTCACCTCGGACCACGTCTTCCTGGGTAACATGAAGCAGCATATGCTGACGCATAAGATACGCGATATGCCGCCACATCTGTTCACCGACTCGAAACTACCCGgtcaacaacaacagcagcagcaacaacaacaaatacAGGAACAAGAAACGTCTAGGAGTCCGATGTGCTCGGATGACTCTAGCCTACCTCCGCCACCTCCACCACCGCCTCCCCCACCTCCGCCGATGCCGCCTTTGGCCATGGAATCGGCTGTACCAGTGAAGAGATCACCACCCGAAGGTGATTTACCAGCACCGAAAAGACCACCTAGCATGCCCAGCAAGCATTTGTGCCAAGTTTGCAATAAGAACTTCTCGTCGTCGTCGGCACTTCAGATCCACATGAGAACACATACCGGTGATAAACCCTTCCGATGTACCGTCTGTCAGAAGGCCTTCACAACCAAGGGAAACCTAAAGGTTCACATGGGGACCCATATGTGGACGAATGGAGCCTCGCGTCGAGGACGTCGAATGTCCTTGGACCTACCACCGCTACCAATAACTCCGAAAGACTCAGAGTTTCTTCAGCGAAGACCAGACCTATTTTACCCATACCTACCCGCGCCATTCCTTAACGGTGTTCAGCAGAAGCTGAACGAGATATCCGTGATACAAAATAGCAACGGTCTGCCTCCTCACCCGGGTGGCGCGAGTAAATACGCGGGACTTTTCGGCTCTGTATACGGTGCTGGTTTCCCGATAGAAAAACAACCGATGGCACCAAGCAACGGGCCTCTTAGCGAGGGTAAATCGTCTCTTCCTACCGGTTCAATGCTTTTCCGAACACCCTCACCATCCCATTCTCCAGGAACGCCGTCATCTAACACAGGGAATCAGAATTCGGCCAGTGTACCGTCTTGGGGAACCGGTGTGGTAGGCGGAAGCGGTAGTGGTGCGGATTCTATCCAACGTCATTTCGACAGGGAAGCACCCTCGAGATCCGACGATGATTCTACACCATCGACGCCGCGACTTCCACCACCGCCGCCTCCCGCACCAAGAGGCGAAGGACTAGCCGCGTGA
Protein Sequence: MQLMRWSITRRLVRRGDKQRSRETSLSAESFCHRSTAAPSTTGEGNDSGSEGEESTGVGVGVVGVSLGEEAVDLTSARSHHGDEDDRDDRGADDLPMDEDYEDGVEEAVESHEDDEEEEEEEGTRKQIRHRQDAENNNSFSEGGGQTTTGIFPPAGASHVTLEALQNTKVAVAQFAATALAGGADSEAALQDLALLQSTLYTLQHQQVFQLQLISQLQQQLSITHNQPASASGTHSTTGEGNPSQDGIIAKEGSPSPSIHPKPLSALTSPPESRPPSHHQHTTSPCPSTPISMSQELALPPSSGSPLGLPLQASTGINVPATVGVGVGTSTGTSTGTGTGTGAGTGGGNVIQTTNVVSQQTNGSNSHMSLSHQMPSLCSISSSLASTIITNTDPPPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRSGKGSRLSPYDSKSGGGRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPIPEHLDKYHPPLLQQLAAPGQRQLTSPPPSAPHHPPFHPAAAHGFLPPQPPLPLTLALPGMPPLYRAPVTVNHSRDEQEVPENLSKPVVGAAISTPSPRSPITHSNSHHSFHDHQLHQKHQQHNAPGSHEMRLETARSPNTALQESPTDSYRPARPTSQEDGARERVTPKREPEEAEETAEEEIDDYEETRRYLCASPQSTVNLNPISQAQPYEDCSMDSKMSGRLDGDGEMEGDEEMEEQPENLSSRGATGRLAHQTIGYPGASPASSSASSGSLQTSFAGILFPGPPSHHQLPHHHSSIGPTTPTGPSGEMMVDPARDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLSPEQIQAAEVNEFPSGYPHHPLASFLPQGFPSLHPAAGAGFALGFPPSRGQQHLSERHDNHLDGKESRQHHLHHHHHHHILQQQQHHQERYLDEQGDDMDDQDDEDEGREDDDRCDEARERQSADGDDRDGTEDIHEDIERRRLHSSAPLFSTSLAALENQVRTITTTCANSVANNSRILSSPPHPSHQYNGNDKTDSPPCNAGGGTPLDLTPRASSTPADTSTSTPNATPPPQPQLQLQPQPQPHLGTHHPQPPNPFGMFAGLLQAVSSPPSTSSMNSSVTGVNSIATMSTTSNPGSGAGSGPLASLTTSAVLAATSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTVCDRGFSTKTNGSWEDVCSCANQRNPFLTNITATTTTITSTTTTTTTNTTIHTSPQYNLQPPPQPPPPPPPRSPISNHERPKRRRRRPEDRKSRGRSGSGGGRHLTYAPVRLPPLLPPALGLLTSDHVFLGNMKQHMLTHKIRDMPPHLFTDSKLPGQQQQQQQQQQIQEQETSRSPMCSDDSSLPPPPPPPPPPPPPMPPLAMESAVPVKRSPPEGDLPAPKRPPSMPSKHLCQVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQNSNGLPPHPGGASKYAGLFGSVYGAGFPIEKQPMAPSNGPLSEGKSSLPTGSMLFRTPSPSHSPGTPSSNTGNQNSASVPSWGTGVVGGSGSGADSIQRHFDREAPSRSDDDSTPSTPRLPPPPPPAPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00060583;
90% Identity: iTF_01303689;
80% Identity: -