Aequ009103.1
Basic Information
- Insect
- Ametastegia equiseti
- Gene Symbol
- salm
- Assembly
- GCA_963989295.1
- Location
- OZ022392.1:15614763-15626034[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 5.7e-06 0.00068 20.7 0.9 1 23 411 433 411 433 0.98 2 9 1.1e-05 0.0013 19.7 2.1 1 23 439 461 439 461 0.98 3 9 0.072 8.4 7.8 3.8 2 23 847 868 846 868 0.98 4 9 4.9e-08 5.8e-06 27.2 0.6 1 23 874 896 874 896 0.97 5 9 6.9e-05 0.0081 17.3 2.6 1 23 906 928 906 928 0.98 6 9 0.0024 0.28 12.4 1.9 2 23 1257 1278 1256 1278 0.97 7 9 0.049 5.7 8.3 1.5 1 15 1284 1298 1284 1298 0.93 8 9 1.2e-06 0.00014 22.8 2.1 3 23 1533 1553 1531 1553 0.96 9 9 2.3e-07 2.7e-05 25.1 0.9 1 23 1559 1581 1559 1581 0.98
Sequence Information
- Coding Sequence
- ATGCAGTTGATGAGATGGTCCATTACCAGACGATTGGTACGACGAGGGGAGGGAAACGACTCCGGATCCGAGGGAGAGGACGGCGGTGGTGTCGTGGGAGTTGGCATAGGAGTTGGTGAAGAGGCGGTAGACCTTACAGCGTCGACGCGTTCTCACCACGGAGACGATGACGAGAGGGATGATCGGGGTGGGGACGATCTACCGATGGACGAGGATTACGAGGACGGCGTTGAGGAGGCCGTCGAGTCCCACGAGgacgaggaggaggaggagggcACGCGGAAGCAAATACGCCACCGTCAAGATGCCGAGAATAACAACAGCTTCTCCGAGGGTGGTGCGCCCCCGACGAGCGGAATATTCCCACCTGCAGGTGCCAGCCACGTAACCCTCGAAGCTTTGCAAAACACGAAAGTCGCGGTTGCACAATTCGCGGCCACGGCTCTGGCCGGTGGTGCTGACAGCGAAGCTGCCCTCCAGGACCTCGCCCTCCTCCAAAGCACTTTGTACACTCTTCAGCACCAGCAGGTCTTTCAACTTCAGTTGATCAGCCAGCTTCAGCAACAGCTCTCGATTACACATAGCCAACCGTCCTCCACTTCGGGTACCACCGTCTCAAATGTCGAGGGAAATCATCCTCAGGATGGCGCCAAAGAGGGATCACCCTCACCCAGCATACACCCGAAGCCCCTTTCCGCCTTGACGTCACCACCCGAATCCCGACCTCCTAGTCACCATCAGCACACGACGTCCCCGTGCCCGTCGACGCCGATCAGCATGTCGCAGGAACTCGCCCTTCCACCGTCGAGCGGTTCGCCACTTGGATTACCGCTCCAGGCTTCGACGGGGATCAATGTTCCTGCGACTGTTGGCGTCGCGGTTGGAACTGGAGGCGGTAGTTTAGGGCAGGGTAATAATAACGGTGGCAATCATCTGCAGAGCAATGGAAGCAACAACCACTTGTCACTGTCTCATCAAATGCCATCGTTATGCTCGATAAGTTCATCCCTAGCTTCGACCATAATAACGAATACCGATCCGCCGCCGCTCCACGAACCGAACACCTTGGAAATGCTTCAGAAACGGGCACAGGAGGTGCTCGACAACGCGAGCCAGGGACTACTGGCAAATAACCTTGCCGACGAGCTAGCCTTCAGGAGCGGTAAAGGCTCGAGACTATCACCGTATGATTCCAAGTCGGGGGGAGGCCGGGGCGAGCCATTCTTCAAGCATCGATGTCGATACTGTGGCAAGGTCTTTGGCAGCGATTCTGCACTCCAGATACACATCCGATCACACACAGGTGAGCGACCCTTTAAATGCAACGTCTGCGGAAGCCGATTCACCACCAAGGGAAACCTCAAGGTTCACTTCCAGAGGCACACGGCCAAGTTTCCCCACGTTAAAATGAACCCAAATCCCATACCCGAACACCTTGACAAATACCATCCGCCACTTCTTCAGCAATTAGCTGCCCCCGGACAGAGGCAGCTCACCTCACCTCCACCCTCGGCTCCCCATCATCCCCCTTTTCATCCGGCTGCAGCGCACGGATTCCTACCACCACAGCCACCCTTACCTCTCACCCTAGCCCTGCCCGGTATGCCACCCCTTTACCGGGCCCCGGTAACCGTTAACCACTGCAGGGATTCGGAGCAGGAGGTTCCGGAGAATCTGAGCAAACCGGTAGGAGCCCCGATTTCAACACCTTCGCCCCGGTCCCCGGTTACCCATTCGAATTCGCATCATTCCTTTCACGAACATCCCCTGCATCCAAATGCCCACCAAAAACACCAGCAGCAAACACCGCCGGGCGGCCACGAGTTGAGACTCGAGACTGCGAGGTCGCCCAATGCTACGAACCAGGAGTCACCGATCGACTCTTCTTACCGACCCGCGAGACCCACCAGTCAAGAAGACGGAGGCGGCGAACGCGTCACTCCTAAACGCGAACCTGAAGAAGCTGAGGAAACTGCCGAAGAGGAGATAGACGATTACGAAGAGACCAGACGGTACCTTTGCGCCTCTCCACAGTCCACTGTCAATCCAACATCTCAGGCACAACCTTACGAAGACTGTAGTATGGACAGCAAGATGAGCGGGAGGCTCGAAGCTGATGGTGAAATGGAAGGGGACGAGGAGATGGAGGAACAACCCGAAAACCTCTCTAGCAGAGGTGCTACCGGACGGTTGCCTGGTCATCAGACCGTCGGGTACCCCGGGGCTTCGCCGGCTAGTAGTAGCGCGAGTAGCGGAAGTCTTCAGACGTCTTTTGCCGGGATTCTTTTTCCCGGACCACCGTCTCACCACCAGCTACCTCATCATCAGTCGTCGGTCGGTCCGGCCACTCCGACTGGCCCATCGGGGGAAATGATGGTCGACCCTGCGAGAGACCCCGCGATATATTCGAGTCTCTTACCGAGGCCCGGTAGCAACGACAATTCGTGGGAAAGTCTGATTGAGATAACGAAAACCTCGGAAACGTCGAAGCTCCAACAACTGGTAGACAACATTGAACACAAACTGACTGATCCCAATCAATGCGTTATCTGCCACCGTGTCTTGTCATGTAAAAGTGCTCTTCAGATGCACTACAGGACGCACACAGGCGAGAGACCGTTCAAGTGCAAGATTTGCGGACGCGCTTTCACGACCAAAGGAAACCTCAAGACTCACATGGGCGTTCATCGCGCTAAACCACCGCTCAGGGTGCTTCATCAGTGTCCTGTTTGTCATAAGAAATTCACAAACGCCCTTGTTCTTCAACAACATATCCGTCTACATACTGGCGAACCCACAGATCTCAGTCCCGAACAAATCCAAGCGGCTGAGGTTAACGAGTTCCCATCCGGCTACCAGCACCATCCTCTAGCCTCGTTTTTACCCCAGGGTTTTCCTTCCCTACATCCAGCTGCTGGGGCGGCTGGTTTTGCCCTGGGGTTTCCTCCGTCCAGGGGACAGCACCTTGGAGGTACAGATCGCCACGATAATCACCTTGAGGGTGGTAAAGAGTCGCGGCACCATTTgcaccaccatcaccatcaccatatgcaacagcaacagcagcaggaAAGATACCTTGACGAACAGGGCGACGAGATGGACGACCAagaagacgacgacgatggAAGAGAGGATGACGACGGGTGCGACGAGGCGAGGGAAAGGCAAAGCGCCGATGGTGACGAGGCTAGCGATGATATTCACGAGGATATTGAACGGCGGAGACACTCTTCGGCTCCCTTGTTCTCCACCTCTTTGGCCGCCCTGGAGAACCAGGTCCGGACGATTACCACTACCTGTGCGAACAGTGTGACCACTAGTAATCCCCGAAACCTCGCCTCTCCGCCAGTCCATCAGTTCAATGGAAACGACAAAACGGCCAGTCCACCTTGCACCGCTAGCACTGGTGCACCTCTTGATCTCACGCCAAGGGCTTCGTCGACTCCAGCCGATACCTCGACGTCGACACCAAACGCTACTCCTCCGCCACAGACGCAGTTGGGCTCCCATCATCCTCAGCCTCCGAATCCGTTCGGTATGTTCGCCGGGCTGCTTCAGGCCGTTTCTTCGCCGCCTTCGACTAGCTCAATGAGCACCGTCAGCGGGGTGAACAGCATTGCTAATATGAGCTCGAACAGCAACCCTGGTACCGGGGCAGGAAGCGGGCCACTCGCTTCTTTAACGACGTCCGCAGTCCTAGCTGCAACTTCCACCTACAACCCGCTCGGCCTAGCTGTCGGAGGGCCAGCAGTCCGTGGAAATACAACTTGCAATATCTGCTACAAGACATTCGCGTGTAACTCGGCACTGGAAATACACTATCGGAGCCACACCAAGGAACGACCTTTCAAATGCACCGTCTGCGATCGGGGATTCTCTACCAAGACCAACGGTTCGTGGGAGGACGTCTGCTCCTGCGCGAACCAAAGGAACCCTTTTCTGACCAACGtcactaccaccaccaccaccaccacaaCAACAACCGCGATCACCTCAACCGCCACAACCACAACCACAAATACCAATATCCACACCACTAGCCCCCAATACAACCttcaaccaccaccaccaccaccaccacggTCACCCATCAGCAACCACGAGAGGCCCAAACGTAGGCGGCGGCGGCCTGAGGATAGGAAGAGCCGGGGGCGGTCTGGGTCCGGAGGGGGGCGGCATCTGACATATGCTCCCGTACGCCTACCCCCGCTACTGCCCCCCGCCCTCGGGCTTCTCACCTCGGACCACGTCTTCCTGGGTAACATGAAGCAGCATATGCTGACACATAAGATACGCGACATGCCACCCCATCTGTTCACCGATGCTAAACCGCCTGgtcaacagcaacaacagcagcaacaacaacaacaacaacaacaacagcagcagcagcaaatACAGGAACAGGAAACGTCCAGGAGTCCGATGTGCTCGGACGACTCCAGCCTGCCTCCACCacctccaccaccaccaccaccacctccaccAATGCCACCCCTGGCTATGGAGTCAGCTGTACCGGTCAAGAGATCACCACCAGAAGGTGATTTACCAGCACCGAAAAGACCACCTAGCATGCCCAGCAAGCATTTGTGCCAAGTTTGCAATAAGAACTTCTCGTCGTCTTCGGCCCTTCAGATCCACATGAGAACTCATACAGGTGATAAACCGTTCCGATGCACCGTCTGCCAGAAAGCCTTCACCACCAAGGGAAACCTCAAGGTTCACATGGGGACCCATATGTGGACGAATGGAGCCTCTCGTCGAGGTCGTCGAATGTCTTTGGACCTGCCACCGTTGCCGATAACACCGAAAGACTCGGAGTTTCTTCAGCGACGACCAGATCTGTTTTACCCATATTTACCCGCGCCATTCCTTAACGGGGTACAGCAAAAGCTGAACGAGATATCCGTAATCCAAAACAGCAATGGTCTGCCCCCGCACCCCGGAGGTGCAAGTAAATACGCAGGTCTATTCGGTTCGGTATACGGGGCTGGTTTTCCTATAGAAAAACAGCCCATGGCACCGAGTAACGGGCCGTTGAGCGATGGGAAATCGTCGCTACCAACAGGTTCGATGCTGTTCCGTACCCCGTCGCCATCGCACTCTCCAGGAACCCCTTCCTCGAACACGGGTAACCAGAATTCGGCAAGTGTACCATCCTGGGGAACAGCCGGAGGAGTTGGTGGAAGTGGGGTCGATTCTATCCAGCGTCATTTCGATAGAGAACCACCGTCCAGGTCAGACGATGATTCTACCCCATCGGCAGCCCCAAGACTTCCACCGCCTCCACCACCCCGAGGAGAAGGCCTCGCGGCGTGA
- Protein Sequence
- MQLMRWSITRRLVRRGEGNDSGSEGEDGGGVVGVGIGVGEEAVDLTASTRSHHGDDDERDDRGGDDLPMDEDYEDGVEEAVESHEDEEEEEGTRKQIRHRQDAENNNSFSEGGAPPTSGIFPPAGASHVTLEALQNTKVAVAQFAATALAGGADSEAALQDLALLQSTLYTLQHQQVFQLQLISQLQQQLSITHSQPSSTSGTTVSNVEGNHPQDGAKEGSPSPSIHPKPLSALTSPPESRPPSHHQHTTSPCPSTPISMSQELALPPSSGSPLGLPLQASTGINVPATVGVAVGTGGGSLGQGNNNGGNHLQSNGSNNHLSLSHQMPSLCSISSSLASTIITNTDPPPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRSGKGSRLSPYDSKSGGGRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPIPEHLDKYHPPLLQQLAAPGQRQLTSPPPSAPHHPPFHPAAAHGFLPPQPPLPLTLALPGMPPLYRAPVTVNHCRDSEQEVPENLSKPVGAPISTPSPRSPVTHSNSHHSFHEHPLHPNAHQKHQQQTPPGGHELRLETARSPNATNQESPIDSSYRPARPTSQEDGGGERVTPKREPEEAEETAEEEIDDYEETRRYLCASPQSTVNPTSQAQPYEDCSMDSKMSGRLEADGEMEGDEEMEEQPENLSSRGATGRLPGHQTVGYPGASPASSSASSGSLQTSFAGILFPGPPSHHQLPHHQSSVGPATPTGPSGEMMVDPARDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLSPEQIQAAEVNEFPSGYQHHPLASFLPQGFPSLHPAAGAAGFALGFPPSRGQHLGGTDRHDNHLEGGKESRHHLHHHHHHHMQQQQQQERYLDEQGDEMDDQEDDDDGREDDDGCDEARERQSADGDEASDDIHEDIERRRHSSAPLFSTSLAALENQVRTITTTCANSVTTSNPRNLASPPVHQFNGNDKTASPPCTASTGAPLDLTPRASSTPADTSTSTPNATPPPQTQLGSHHPQPPNPFGMFAGLLQAVSSPPSTSSMSTVSGVNSIANMSSNSNPGTGAGSGPLASLTTSAVLAATSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTVCDRGFSTKTNGSWEDVCSCANQRNPFLTNVTTTTTTTTTTTAITSTATTTTTNTNIHTTSPQYNLQPPPPPPPRSPISNHERPKRRRRRPEDRKSRGRSGSGGGRHLTYAPVRLPPLLPPALGLLTSDHVFLGNMKQHMLTHKIRDMPPHLFTDAKPPGQQQQQQQQQQQQQQQQQQQIQEQETSRSPMCSDDSSLPPPPPPPPPPPPPMPPLAMESAVPVKRSPPEGDLPAPKRPPSMPSKHLCQVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQNSNGLPPHPGGASKYAGLFGSVYGAGFPIEKQPMAPSNGPLSDGKSSLPTGSMLFRTPSPSHSPGTPSSNTGNQNSASVPSWGTAGGVGGSGVDSIQRHFDREPPSRSDDDSTPSAAPRLPPPPPPRGEGLAA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00175973; iTF_01303689; iTF_00175276; iTF_00939853; iTF_01411790; iTF_01412586; iTF_01414446; iTF_00938992; iTF_00719665; iTF_00718849; iTF_01413654; iTF_01049149; iTF_00174527; iTF_01200415;
- 90% Identity
- -
- 80% Identity
- -