Basic Information

Insect: Tenthredo scrophulariae
Gene Symbol: -
Assembly: GCA_963978835.1
Location: OZ022231.1:21893636-21895408[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00042 0.052 14.8 1.1 1 23 86 108 86 108 0.96

2 14 1.5 1.9e+02 3.6 6.2 1 23 142 165 142 165 0.94

3 14 0.029 3.6 9.0 3.8 1 20 177 196 177 199 0.93

4 14 0.0031 0.39 12.0 1.6 1 23 208 231 208 231 0.95

5 14 0.0035 0.44 11.9 3.0 1 23 244 266 244 266 0.97

6 14 0.38 47 5.5 3.6 2 23 277 299 276 299 0.94

7 14 0.0067 0.83 11.0 3.1 1 23 336 359 336 359 0.97

8 14 0.018 2.2 9.7 2.0 1 23 376 399 376 399 0.95

9 14 1.4e-06 0.00017 22.6 1.3 1 23 405 428 405 428 0.96

10 14 0.014 1.7 10.0 0.8 3 23 435 456 433 456 0.94

11 14 0.00018 0.022 15.9 0.4 1 23 461 484 461 484 0.97

12 14 2e-08 2.5e-06 28.4 0.4 2 23 491 512 490 512 0.97

13 14 5.1e-08 6.3e-06 27.1 0.4 1 23 518 540 518 540 0.98

14 14 1.8e-07 2.2e-05 25.4 0.3 1 23 546 568 546 568 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00042	0.052	14.8	1.1	1	23	86	108	86	108	0.96
2	14	1.5	1.9e+02	3.6	6.2	1	23	142	165	142	165	0.94
3	14	0.029	3.6	9.0	3.8	1	20	177	196	177	199	0.93
4	14	0.0031	0.39	12.0	1.6	1	23	208	231	208	231	0.95
5	14	0.0035	0.44	11.9	3.0	1	23	244	266	244	266	0.97
6	14	0.38	47	5.5	3.6	2	23	277	299	276	299	0.94
7	14	0.0067	0.83	11.0	3.1	1	23	336	359	336	359	0.97
8	14	0.018	2.2	9.7	2.0	1	23	376	399	376	399	0.95
9	14	1.4e-06	0.00017	22.6	1.3	1	23	405	428	405	428	0.96
10	14	0.014	1.7	10.0	0.8	3	23	435	456	433	456	0.94
11	14	0.00018	0.022	15.9	0.4	1	23	461	484	461	484	0.97
12	14	2e-08	2.5e-06	28.4	0.4	2	23	491	512	490	512	0.97
13	14	5.1e-08	6.3e-06	27.1	0.4	1	23	518	540	518	540	0.98
14	14	1.8e-07	2.2e-05	25.4	0.3	1	23	546	568	546	568	0.98

Sequence Information

Coding Sequence: ATGGAACTATGGCAGAGATCAAATCCTAAGGGAAGACCCTCTTATTCTCTGGTGCCTGTTGTCGGACGGAGTTTAATCAACAGAAGGACTTCCAAGGACGAATTTATACCGGCCAATGAAATCAAGGTCGAAATCAACGAGGAAGTAACCGGTGTAAGATGCTCGGTGGAAACTATCCAAGAATCTTCCACTCCCTGCGAGGAGATCAGATGCCAAGAGTCACTTGCTCACTTGTGTCAAGTTATGGTGGAATTTCATCCATGCGATAAATGTGGGATGAAATTTCCTGTCGAGAATATGCTCAAGAGACATAAAATTAGACACACTCGAAAGTACAATGCTTGCGATGTTAAATTAGGGAAAAATGATCGTCGTAATCCTCTGAACATATGGAGGCATAGGGTAGAGGAGAAAAATGTTCTTTATCTTTGCAGTGTATGCGATTTTAAATGCCACAAAAGAACTACGCTAACTTCTCACGTTAGCAGAAGACATAAGGTACGGAAGACGGCGGAACGTTCGAAACTTTACCACTGTGGTAGTTGCGATTACAAGTGCACAAAGAAGGAGAATCTCAATGCCCACGTATGGAGGCACAAGGACGATCAGAGGGAGGCCAACTTTCCCTGTAAGATATGCgatttcaagtcaaaaaaaCGGAGCACGTTAGCGTCTCATGTTACAAGGAAACACAAACGTAACAtggaaggagaaaaagagaaggaagaatATCACTGTGACACATGCGACTACAAGACCTTCGAGAAGGAGAATCTCCAGGTCCATGTCAAACGGCACAAGGAGAATCTGGAGAAAGTTGTATCCCTCTCCTGTACCTCCTGCGATTTTAAATGCAAGAAACGCGGGACCCTGGCCTCCCATGTAACGAGAAAACACAAAGTGGCCGAAGAGTGCAGCTGCAACGTTTGCGACTTTAAATGTCTTAAGAAGAGCACAATGTACTCTCACAAACGAAGGCACAGGGCTGAGAGCGAAGGCAAGGTCTACAACTGTAACGAGTGTAACTTCAAAACGATAAAAAAGACTTCCCTCTACTCTCACATCAAGAGGAAACACAAGGTTCAAGCCAAGGGTGATTCTGGCCTCGAGCAAATCACTGAATACTTTTACTGCAGTCAGTGCGACTACAAGAACAAAAATAAGTACGAACTTAAGGTACACGTCGCCAGGAAACACACAGACGATTTTAAATTCTCATGCGAGACTTGTGGTAAGAAATTCAAGGTCAAAGGCGACCTCACCAATCATATAAGGTTCAATCACAAGGAAGGACCCGTGATTTGCGACGTGTGTGGAAAAACCTGTCTGAACAGCAACTCTCTATACGTTCATCAAAAGTTTGCTCATTACAAAGCTAAATACGAGTGTAGAATTTGCAAAAGACGACTCGTGACCCAGGAGAACTTGGACGAGCATATGTTAAGACAGCACGAAAAACGTGAGAACGTTGTGTGTGAGGAATGCGGAAAAACATTTTCCCGCAACAGCCGTCTCAAAGTTCACATGAGAATTCACACGGGTGATAAACCATACACTTGTAACATTTGCGGAAAATCTTTTGCCCGACGAACCGCCCTGAAACAACACCTTCTGATACACACAGGCATGAGACCCTACGTGTGCGATATTTGTGGTAAATCATTCACACAGAAACCTGGACTCATCAGTCATCGAAAGTCGCATCCTGGATCACATCCCCCTCTGCCTAGGGTTCTCATTGATCATATACTCAACGACGTCATGAATAACTGA
Protein Sequence: MELWQRSNPKGRPSYSLVPVVGRSLINRRTSKDEFIPANEIKVEINEEVTGVRCSVETIQESSTPCEEIRCQESLAHLCQVMVEFHPCDKCGMKFPVENMLKRHKIRHTRKYNACDVKLGKNDRRNPLNIWRHRVEEKNVLYLCSVCDFKCHKRTTLTSHVSRRHKVRKTAERSKLYHCGSCDYKCTKKENLNAHVWRHKDDQREANFPCKICDFKSKKRSTLASHVTRKHKRNMEGEKEKEEYHCDTCDYKTFEKENLQVHVKRHKENLEKVVSLSCTSCDFKCKKRGTLASHVTRKHKVAEECSCNVCDFKCLKKSTMYSHKRRHRAESEGKVYNCNECNFKTIKKTSLYSHIKRKHKVQAKGDSGLEQITEYFYCSQCDYKNKNKYELKVHVARKHTDDFKFSCETCGKKFKVKGDLTNHIRFNHKEGPVICDVCGKTCLNSNSLYVHQKFAHYKAKYECRICKRRLVTQENLDEHMLRQHEKRENVVCEECGKTFSRNSRLKVHMRIHTGDKPYTCNICGKSFARRTALKQHLLIHTGMRPYVCDICGKSFTQKPGLISHRKSHPGSHPPLPRVLIDHILNDVMNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00938952;
90% Identity: iTF_01303657; iTF_01411772;
80% Identity: -