Basic Information

Insect: Tenthredo scrophulariae
Gene Symbol: -
Assembly: GCA_963978835.1
Location: OZ022236.1:13317970-13321832[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 9 1.1e+03 1.2 1.6 1 16 392 407 392 414 0.76

2 20 0.00044 0.055 14.7 0.6 2 23 424 445 423 445 0.97

3 20 1.3 1.6e+02 3.8 0.2 2 23 475 496 474 496 0.82

4 20 0.014 1.7 10.0 0.9 1 23 504 527 504 527 0.92

5 20 6.5e-05 0.0081 17.3 0.8 1 23 533 557 533 557 0.92

6 20 0.76 95 4.5 0.1 2 23 591 612 590 612 0.91

7 20 0.17 21 6.6 0.7 2 23 621 643 620 643 0.93

8 20 0.00086 0.11 13.8 2.2 1 22 649 670 649 673 0.90

9 20 0.00028 0.035 15.3 6.5 1 23 757 779 757 779 0.98

10 20 0.0054 0.67 11.3 0.3 1 23 786 809 786 809 0.92

11 20 9.2e-05 0.011 16.9 2.1 1 23 815 837 815 837 0.98

12 20 0.00063 0.078 14.2 2.1 1 23 843 865 843 865 0.97

13 20 2e-05 0.0024 19.0 0.8 1 23 871 893 871 893 0.97

14 20 0.015 1.8 9.9 0.5 1 23 906 929 906 929 0.95

15 20 0.00012 0.015 16.5 3.7 1 23 945 968 945 968 0.96

16 20 0.0056 0.7 11.2 1.6 1 23 976 999 976 999 0.96

17 20 5.3e-05 0.0065 17.6 1.6 1 23 1005 1027 1005 1027 0.98

18 20 0.0066 0.82 11.0 6.9 1 23 1033 1055 1033 1055 0.98

19 20 0.00026 0.032 15.4 1.6 1 23 1061 1084 1061 1084 0.98

20 20 0.0017 0.21 12.9 3.5 1 23 1090 1112 1090 1112 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	9	1.1e+03	1.2	1.6	1	16	392	407	392	414	0.76
2	20	0.00044	0.055	14.7	0.6	2	23	424	445	423	445	0.97
3	20	1.3	1.6e+02	3.8	0.2	2	23	475	496	474	496	0.82
4	20	0.014	1.7	10.0	0.9	1	23	504	527	504	527	0.92
5	20	6.5e-05	0.0081	17.3	0.8	1	23	533	557	533	557	0.92
6	20	0.76	95	4.5	0.1	2	23	591	612	590	612	0.91
7	20	0.17	21	6.6	0.7	2	23	621	643	620	643	0.93
8	20	0.00086	0.11	13.8	2.2	1	22	649	670	649	673	0.90
9	20	0.00028	0.035	15.3	6.5	1	23	757	779	757	779	0.98
10	20	0.0054	0.67	11.3	0.3	1	23	786	809	786	809	0.92
11	20	9.2e-05	0.011	16.9	2.1	1	23	815	837	815	837	0.98
12	20	0.00063	0.078	14.2	2.1	1	23	843	865	843	865	0.97
13	20	2e-05	0.0024	19.0	0.8	1	23	871	893	871	893	0.97
14	20	0.015	1.8	9.9	0.5	1	23	906	929	906	929	0.95
15	20	0.00012	0.015	16.5	3.7	1	23	945	968	945	968	0.96
16	20	0.0056	0.7	11.2	1.6	1	23	976	999	976	999	0.96
17	20	5.3e-05	0.0065	17.6	1.6	1	23	1005	1027	1005	1027	0.98
18	20	0.0066	0.82	11.0	6.9	1	23	1033	1055	1033	1055	0.98
19	20	0.00026	0.032	15.4	1.6	1	23	1061	1084	1061	1084	0.98
20	20	0.0017	0.21	12.9	3.5	1	23	1090	1112	1090	1112	0.97

Sequence Information

Coding Sequence: atgaagacatttacgataaaaataaCCGACGCGGTTAACGTCGTACTTACAATGTCAGAAACTTTTAAAGAtcttaaagaaaaattgaataacattAGTATAGAATTCGATATAACTTCTATGCTGATCAAGGGAAAACAATTAACCGAAGATCTAGTCGTTGCTGAGTATCTTAACATCGATGACAAAGAAGCCGACGATGAGGCGGCGGAATTTGTGTTACCAGATTTACCAGAATCAGAGACACCGATTTGCAAAGATCCAAATGGCCAAACTTTGGGTGATGAATTGCTCTGTCGTTTGTGCGGAATCAAGACTGAGGATCCTatacgaattttcaacgaatCTGAAGACATTAGTCTTAAGATTAACAACTTTATACCGGTGTCTATTTCGAGGGAGGACCAACTATCCAAGTACATTTGCACAGCTTGTGTTGAGAAACTGGAAATGATAAACGAGTTTATCAGGATCTGTAAAGAAACTGATGAGAAGTTATCCAGCATCACAAAATCTAGGGGAATTTTACTTACAAATATAAAGTCTGGAGATACGGGAAGTTCTGTAACAGAAACAGAAAGTTTTATAGTCAAGGATAAAGCGGCGATATATAAATGTCCGAACTGTAAAATTGATCTGAGGATTACCAGAGCTCAAGAATCTCAGAGTGACCAAAGCAAGTCACGGATATCTTCAGTTGTTAAAAAGATAGGGAAAAGATCTCACAATTTACGAAGTTCAAATACTAATAGAAGGGTTGGTACTAGACTGGAAAAGATATCGAGAAAATCTACAAATGGAATTGCCGAAGATATTCTGATTAGTAATGCAGAGGAGGCCAGAGAAACTTCAGATATTTTAAAAACGTCTAAATCAACTGGCGAACTAATTCACAGCGGAAATACAGAGGGTAATTCATCtttaaataatacaaattctggtgaaaagggaaaaatgaaGCTCAGAGACATTCGGAAAAGAATGCTAGTCGGGGATGCTGCGACTGAGAATATTTCAGATGTAGTTAAAACGAGGAAACTGGAGTCAGATGCTTTGGAAAATGctttgttttcaattaattctgATCTCGAAGTATCTGGTATAACTGGAGAATTTGTCGAGCTTGATGCGCTGGAAGAAAATAGCACCGAGAGCATGAAAAAGCGGTCTAAATACAAGTGCGAATTGTGTGAAGCAGAATTCTATTCACATGAGAGATATTCGTTCCATGTTGAAAGACAcgattctgaaaatttcgacGAATTTATAAAATGCAGCTTTTGTAAAAAGGATTTTCCAACTGAAGATGAGCTTTGGGAACATCGGAAATATCATATTGCAGATAGTCCAGACGGTGGGGAAGGCTCTCCTTCAAGTATAGACGTTCTGCAATTAGAGAGTAACCGAAAATCCACCAAATCAACTTGTGACGAGTGTGGAGCTCGGTTTGTACTTCGGGAGCGGTACGAATTTCATATTGAGAGACACAAGTTTGGGAATATAAAACAGTTTTCTTGCATGATTTGCGACAAGAGATTCAAGAGCGAAAATATACTCTGGGATCATTACCAGTATCAGCATAAATCTGGAGAACGTTTTGCCTGTGTTACATGCGACAAAACTTTTGTTAAGAGAGCTAACTTGAATTATCATTTGAAAACGTTCGGACATAAAGGAGGAAAAGTTTTGGCTAGTCCAGATCAAACTCAGCAAAACGACGCAGAGAGCGGGGTGAAATTATCAGACGTCAGTAAACCTAGGCCGAAGATAACATGTGCTGATTGCGGAGCACGTTTCGTTCTTCAAGAACGCTATGAATTCCATATGGAGAGACATAAGTCGGGAAAAATGGACATATGCGTTTGTACTTTATGCGGAAGAGAGTCGACAAACGAGAACGTACTTTGGGACCACTATCAGTACATGCACAAGAGGACGAAGCGATATGCTTGCACAACTTGTGGAAAACTTTTCCATAAACAGTCAATGTTGAGCAGACACCAGATAAAATATGGCCACAAAGGGACTAGGGAAATAGACGTAGATACAGACGGAAATACTATGACAGTAGACAGCGCTGCTTTCAAAAAAGTAATCGCCGAAGAAGTTGTAGAAATGAAATCTGTTAATTGTGTATTATGCGGCGAAGTCGTCTGGGGCGTAGATCCAAACTTAATAAATGACGCTGTAACTTGCGCGAGCTGTGAAGGACCGGGACTATCTTTACAAGTTGATTCCGACGGAGCTAAGGTCATATCTCGTAGGCAGTATCATTGCAATATGTGTAATAAACACTTTACTACTAAAGATAGACTGGAGTATCACATAATGAGGCACTCGGAAAACATGGATGAGTTCGTATGCAGTACTTGTGGAAAGGAATTGAGCACGGAACAAGCCCTGTTTGAGCATTACCTATTTGTTCACAAAGGAGCTAGGCCCCACGTATGCGAATTGTGTGGAAAATCTTATCAGTTTAAAGCCAGACTTAAAGAACACATGAGAAGCCACAGTGGGGAGAGACCATTTGCCTGTGAAATATGTGGACAACGATGCATGACTAACAATGCTTTGAGGTCTCATAAGAAGACACATATCACTGAAAAGCGGTTTCCCTGCCAAATATGCAAAAAGGCTTTCAGAAAGAGACAGGATTTGAACGAGCATTTAGAAAGGCATTGGAAAAACGACAAAACTATGATGTTCCCTCAAGTATTTAGCTGCGCTGTTTGTCTGGAGATGTTCCCCACCTTTAGAGTCCTCAAGAAACACATGAAGGATACTCACAGTGTAGAAAGCCAGGACCCTATATTAACAGATCTACAGCCTTGGTTCGAGTGCGAAGATTGCCACGAAAAATTCAAGCATCAGATGTCCCTCAAAGTGCACAGAGAACGGGCACACGAGGGTAAAATGAGACCCGTATACCACTGCGATGTTTGCAACGTAACTTACAAAAATGCAAGAGTACTCTCTAATCATATCAAAAATAAACACGAGGGAGGAAAGCGGTACAAATGTGCTCAATGCGGTAAAGAATACAACCAGTCCACATCTCTCCATAATCACATCCTCCTTCATACTGGGGAGAAACCGTTTAGCTGTGAACATTGCGAAATGACCTTTAGAACTAAGGAATCTCGAGATCATCACCAGAGAAAACACACCGGTGAAAGACCCTACAAATGCCCTCGATGCGACAAAGCTTTTGCTACTACTACACAACGGCGTGAACATCGCAAACGGGAACACGACGAAGGAAATAGACACAGCTGTCCCGAGTGTGGGAAAGTTTGCTTTGATGAACACGGGGTCAGGAGTCATTTGAATACGCATTTTAGCGACAGATTCAAAAACATACAAGAAAATCAGACCTGA
Protein Sequence: MKTFTIKITDAVNVVLTMSETFKDLKEKLNNISIEFDITSMLIKGKQLTEDLVVAEYLNIDDKEADDEAAEFVLPDLPESETPICKDPNGQTLGDELLCRLCGIKTEDPIRIFNESEDISLKINNFIPVSISREDQLSKYICTACVEKLEMINEFIRICKETDEKLSSITKSRGILLTNIKSGDTGSSVTETESFIVKDKAAIYKCPNCKIDLRITRAQESQSDQSKSRISSVVKKIGKRSHNLRSSNTNRRVGTRLEKISRKSTNGIAEDILISNAEEARETSDILKTSKSTGELIHSGNTEGNSSLNNTNSGEKGKMKLRDIRKRMLVGDAATENISDVVKTRKLESDALENALFSINSDLEVSGITGEFVELDALEENSTESMKKRSKYKCELCEAEFYSHERYSFHVERHDSENFDEFIKCSFCKKDFPTEDELWEHRKYHIADSPDGGEGSPSSIDVLQLESNRKSTKSTCDECGARFVLRERYEFHIERHKFGNIKQFSCMICDKRFKSENILWDHYQYQHKSGERFACVTCDKTFVKRANLNYHLKTFGHKGGKVLASPDQTQQNDAESGVKLSDVSKPRPKITCADCGARFVLQERYEFHMERHKSGKMDICVCTLCGRESTNENVLWDHYQYMHKRTKRYACTTCGKLFHKQSMLSRHQIKYGHKGTREIDVDTDGNTMTVDSAAFKKVIAEEVVEMKSVNCVLCGEVVWGVDPNLINDAVTCASCEGPGLSLQVDSDGAKVISRRQYHCNMCNKHFTTKDRLEYHIMRHSENMDEFVCSTCGKELSTEQALFEHYLFVHKGARPHVCELCGKSYQFKARLKEHMRSHSGERPFACEICGQRCMTNNALRSHKKTHITEKRFPCQICKKAFRKRQDLNEHLERHWKNDKTMMFPQVFSCAVCLEMFPTFRVLKKHMKDTHSVESQDPILTDLQPWFECEDCHEKFKHQMSLKVHRERAHEGKMRPVYHCDVCNVTYKNARVLSNHIKNKHEGGKRYKCAQCGKEYNQSTSLHNHILLHTGEKPFSCEHCEMTFRTKESRDHHQRKHTGERPYKCPRCDKAFATTTQRREHRKREHDEGNRHSCPECGKVCFDEHGVRSHLNTHFSDRFKNIQENQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01303654;
90% Identity: iTF_01411759;
80% Identity: -