Basic Information

Insect: Tenthredo scrophulariae
Gene Symbol: -
Assembly: GCA_963978835.1
Location: OZ022228.1:21478222-21481617[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.021 2.7 9.4 0.2 6 21 12 27 6 28 0.86

2 13 0.56 70 5.0 0.3 1 12 228 239 228 248 0.89

3 13 0.043 5.4 8.4 3.2 1 23 356 378 356 378 0.97

4 13 1e-05 0.0013 19.9 0.4 2 23 382 403 381 403 0.98

5 13 8.8e-05 0.011 16.9 2.9 1 23 414 436 414 436 0.98

6 13 0.017 2.1 9.7 0.1 1 23 455 476 455 476 0.90

7 13 0.00081 0.1 13.9 0.0 2 23 482 503 481 503 0.95

8 13 6.1e-05 0.0076 17.4 3.7 1 23 529 551 529 551 0.99

9 13 2.1e-06 0.00026 22.0 3.7 1 23 557 579 557 579 0.96

10 13 0.00013 0.016 16.4 4.4 1 23 585 607 585 607 0.98

11 13 1.5e-06 0.00018 22.5 0.8 1 23 613 635 613 635 0.98

12 13 9.4e-05 0.012 16.8 0.2 1 23 639 661 639 661 0.99

13 13 0.0004 0.05 14.8 0.2 1 23 669 691 669 691 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.021	2.7	9.4	0.2	6	21	12	27	6	28	0.86
2	13	0.56	70	5.0	0.3	1	12	228	239	228	248	0.89
3	13	0.043	5.4	8.4	3.2	1	23	356	378	356	378	0.97
4	13	1e-05	0.0013	19.9	0.4	2	23	382	403	381	403	0.98
5	13	8.8e-05	0.011	16.9	2.9	1	23	414	436	414	436	0.98
6	13	0.017	2.1	9.7	0.1	1	23	455	476	455	476	0.90
7	13	0.00081	0.1	13.9	0.0	2	23	482	503	481	503	0.95
8	13	6.1e-05	0.0076	17.4	3.7	1	23	529	551	529	551	0.99
9	13	2.1e-06	0.00026	22.0	3.7	1	23	557	579	557	579	0.96
10	13	0.00013	0.016	16.4	4.4	1	23	585	607	585	607	0.98
11	13	1.5e-06	0.00018	22.5	0.8	1	23	613	635	613	635	0.98
12	13	9.4e-05	0.012	16.8	0.2	1	23	639	661	639	661	0.99
13	13	0.0004	0.05	14.8	0.2	1	23	669	691	669	691	0.97

Sequence Information

Coding Sequence: ATGGGATCGATGAGTCTAATATGTCCGATGTGCTGCGGGGAAACATTCAACAATCCTCAGTCCTTAAAGTATCATTTATTAAGTATTACGGACAATCTATATTGTCCCAGTTGTTCAGACCGATTCGATTCCGTATTAGCATTGATTCAACATTTGGATCGTTGCGGTCAATCGCCAGAACcagaaacagaaacagaagTTTTAATGGAAGCAAATGTGGAACAAATCAATGAGAGTTTCCTGGATAGTGTCAAGGACGGAGATATCATGATCGTCGGAGAACCCCGTGCTATTCAAGTCGGCGATAACGGAGAAATCAATGTGGTGGAAAAAATGGATGTTGATAAAAGAAAGTCTGAAACTGTTGCGTCAGTTTTGGAAGCTAAAAGCCGATCTACTCCGTCTGTAGTCGATGAATCTAATCCTAAATCTCCGACTCGACAAGCATTGGTAGAACTGAAGGTAATCAAAGAGGACACTAGAATcgtgaatgagaaaaatatcatCACTATTTTGCCTGCGGGTTCGGAACTCCTCGATAATGATGATAGTAATTTGATGGCTGATGGTCATTCGCTTATGGAGGACGACGACACGGAGGATACTAATGATGGAGGAATTCTCCAAGTAAAGCAAGAAATCTGCGAGGTAAAACTGGAAGAGTTGGAGGCTGAGGCATTGTACAGCTGTAGTAGTTGCGGCATGAGCTTCAACTCAGTTTTAGAACATATCAAGGAGTTTCACGATGGTCAAGAGGTAGTATTAGAAATGGCGGAGCAACAGTTAGATGAGCTGCCTGTACCGGCCTCGATTACACCGCTTGAAGAGCCGACATCTGTGATAGCAAATCGGCAGCGTCAAATGATGAATACTTTAAGAACAGAGGAATGTGTGGACAGCGAGGGCAGACTATACACCAGAAAAGTGGTTCAGATTGAAAGATTTTGGGATCGGCCAACGTCTTCGCTTCCACCTGCTAAGGCACCGATGATTGAGAAATTCTTTTCGAATGTGGAAGGTGTGAAGGTCAGAGACAAGAACCTGCCTACAGGTCCAACACGGATGTACCGTTGCAACCAGTGCCTTGAACATTTTCCAAAGTTGGGAGACTTTAGAGTTCATGTCTGTCTTCATGGTAATAATCAATGTGGCCACTGCGATCAAGCGTTTGCGACAGCCAGGGCATTGCAGCTACACATGAAGGTACATGATAGCGAATCTGATGGGGTCCAGCGTATGTTTGTCTGTTCTACTTGTGGCACAGAATTTTCGTCTCACAAAAGTCTACGATTACACTCTCGAATGCATGCACCGGTGAGGGCGAGGCATGTTGACGCTCCCGAAGGCACTCACAGTGCCACCTTTACTTGTCCTGAATGTGATAAAGTTTTATCTGAATCTTATCGAGTAGCACACATGGCTCTACATTCGGGTGGTTCGGTGACCTGCAGCGTGTGCAATCGAAAGTTTGATTCTGCAGATAGTTTGGCAATGCATGCAGCAGTTCATACGGAGTCGAATCATTCCCACTCACCGACACCACCACGAGGCGAGGGAAGCGATAGTACAGATGCCCAGAAACCTTATCAGTGCCAGCATTGTGGACGCCGATTTGCTAGACCGCATGAAAAAGTGAAACATGAACGCATACATACTGGCGAGAAACCGCATGCTTGTGAGGTATGTGGCAAGACGTTTCGCGTTTCTTATTGTCTGACTTTACATATGCGAACTCATACCGGAGTTCGTCCATACGTTTGTCAGCATTGTGGCAAGAGATTCAAAGCATCTTCTGTTTACAATCATCACTTGCTTACTCATGGAGAAGAGAGAGCATACACATGTCCGTACTGTCCAAAGACTTTTAAAACTCGAGTACAACTTGCTGGGCACAAAAATAGCCACACAAAGCCGTTCAGATGTACGGAATGCTCGAGACCATTTGCCTCATTATATGCAGCTAGAGCGCATATACAAACTCATAAGAAAGACAATAATCTTAAATTCAGTTGTTATATCTGTGGAGCTTCTTACGGCAGAGCATTTGCGCTTAAAGATCATTTAAAGCAACATGGCCAGGACGTACTAGCTCCTCCTGAACCTGcaagagaagaagaagttcCCGATGGAGATGATTTTCTTCTTGCTGAAGAGGAAGTAGAAGATGATGAGCTTGTTATTCCTTCACCTTTACCAGTTGCTCAATCCTCAGAGGCAGAAGATTCAGATTAG
Protein Sequence: MGSMSLICPMCCGETFNNPQSLKYHLLSITDNLYCPSCSDRFDSVLALIQHLDRCGQSPEPETETEVLMEANVEQINESFLDSVKDGDIMIVGEPRAIQVGDNGEINVVEKMDVDKRKSETVASVLEAKSRSTPSVVDESNPKSPTRQALVELKVIKEDTRIVNEKNIITILPAGSELLDNDDSNLMADGHSLMEDDDTEDTNDGGILQVKQEICEVKLEELEAEALYSCSSCGMSFNSVLEHIKEFHDGQEVVLEMAEQQLDELPVPASITPLEEPTSVIANRQRQMMNTLRTEECVDSEGRLYTRKVVQIERFWDRPTSSLPPAKAPMIEKFFSNVEGVKVRDKNLPTGPTRMYRCNQCLEHFPKLGDFRVHVCLHGNNQCGHCDQAFATARALQLHMKVHDSESDGVQRMFVCSTCGTEFSSHKSLRLHSRMHAPVRARHVDAPEGTHSATFTCPECDKVLSESYRVAHMALHSGGSVTCSVCNRKFDSADSLAMHAAVHTESNHSHSPTPPRGEGSDSTDAQKPYQCQHCGRRFARPHEKVKHERIHTGEKPHACEVCGKTFRVSYCLTLHMRTHTGVRPYVCQHCGKRFKASSVYNHHLLTHGEERAYTCPYCPKTFKTRVQLAGHKNSHTKPFRCTECSRPFASLYAARAHIQTHKKDNNLKFSCYICGASYGRAFALKDHLKQHGQDVLAPPEPAREEEVPDGDDFLLAEEEVEDDELVIPSPLPVAQSSEAEDSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01413613;
90% Identity: iTF_01413613;
80% Identity: -