Basic Information

Insect: Tenthredo scrophulariae
Gene Symbol: -
Assembly: GCA_963978835.1
Location: OZ022230.1:6942055-6944974[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 8.7e-05 0.011 16.9 0.7 2 23 333 354 332 354 0.97

2 11 0.00034 0.042 15.1 0.7 1 23 362 385 362 385 0.94

3 11 0.00074 0.092 14.0 2.2 2 23 433 454 432 454 0.97

4 11 2.7e-07 3.3e-05 24.8 0.7 2 23 502 523 501 523 0.97

5 11 3.2e-05 0.0039 18.3 1.5 1 23 528 551 528 551 0.95

6 11 6.9e-06 0.00085 20.4 0.2 1 23 588 610 588 610 0.98

7 11 9.5e-07 0.00012 23.1 0.9 1 23 620 642 620 642 0.96

8 11 2.7e-06 0.00033 21.7 1.2 1 23 648 670 648 670 0.99

9 11 1.4e-05 0.0017 19.5 0.2 1 23 676 698 676 698 0.98

10 11 0.0023 0.29 12.4 4.2 1 23 704 726 704 726 0.98

11 11 0.00052 0.065 14.5 0.3 1 21 732 752 732 753 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	8.7e-05	0.011	16.9	0.7	2	23	333	354	332	354	0.97
2	11	0.00034	0.042	15.1	0.7	1	23	362	385	362	385	0.94
3	11	0.00074	0.092	14.0	2.2	2	23	433	454	432	454	0.97
4	11	2.7e-07	3.3e-05	24.8	0.7	2	23	502	523	501	523	0.97
5	11	3.2e-05	0.0039	18.3	1.5	1	23	528	551	528	551	0.95
6	11	6.9e-06	0.00085	20.4	0.2	1	23	588	610	588	610	0.98
7	11	9.5e-07	0.00012	23.1	0.9	1	23	620	642	620	642	0.96
8	11	2.7e-06	0.00033	21.7	1.2	1	23	648	670	648	670	0.99
9	11	1.4e-05	0.0017	19.5	0.2	1	23	676	698	676	698	0.98
10	11	0.0023	0.29	12.4	4.2	1	23	704	726	704	726	0.98
11	11	0.00052	0.065	14.5	0.3	1	21	732	752	732	753	0.94

Sequence Information

Coding Sequence: ATGGAAGTGGAAAAGACAGAAGAAGGTGCTGAAAATATATCCGAACTTCAGTCAACTTCTTACCACGAATGTCGCGTTTGTTTAAAGAATTCAAACGAGTTTTGGGAATTGTTCGAAAACGATCATGATATCCCACGGAAAATAATGGCGTTTGCATCTATACAGATTGAACACGGAGACGGCTTACCAAGTGTAATTTGTTTTCCTTGTCGTCAGCTACTGGACGTTTCTTACGATTTTAAATGTCAGGTTGAGAGGTCCGATGCCTCTTTACGTAAAATATTACTAACTAAAATAGAAGTGATTCAAGATGCTGGAAAAGAGTCATTGTCGCAGTCGGTTAATGACGTTATTACAGAGGCTATCGCCGACGAGATTCCAAATGATCATATCGAACTAAAGGATTTTGAATTACATAACGAAGCTAAGATCCTCACTCTACAAGATATCAAAAACGTCGTATTGAACGATTACGATAATAAACAAGAAGTAGTAACTTATGGGATTAATGAGGAATGCGAGGGTGGTAATGAGTCCTTGCATGAAGAGGAAACACGGGAAAGAAACGGGGATGATGAGatagatgataaaaatatagataaaCATGATTTAGGCGGGCCAGAGATTATAGCGAGTTTGGAGAACTCTGAGGTACTGTTAGAGAATGAAGAAGTTACGGTGGAGAAATTGATAGACGTAACAGATCAGCGTATGGAATCTAAAACGGAACCAATCAAACAGGAAGAACTCCTCTTACCAGAGGATAGCGATATGTCCGAAGGAGAGGAGGACGATCACCAAACTGATGAGATTATTTTCAACGGTGAAGATCTTaagtttgaattgaaaaataattcgctaTCAGAAAGGGAGGATGAAATTGATGAAGCATCTTCTGAATCTAGTaaacttaaaactatgaatAGCCAAATTTCTAGTGGAGAAATTAACGACAGTGATGAAGAAAAACCATTGATTTCGAGAACTAGTAGACAAAAATGTCCCCATTGTATAAAAAGCTTTGCCACTAATCTTGCGCTGCAAAGACATATGGCGGTTCATAAACACAAGACTAAACTTCGATACGTTTGCTACTTGTGCGACAAACAATTTTCTAATGTCGCTAAACTGAAAAATCATGTATCTAATAACCAcgattcattgaaaaatgacaatagAATTGATATCGATAATAATTGCGGTAGAGTCGAAACTGATAGAAAGATAGACAAGTTGGAGAAAGATATCGGTGGCTCTATCGACAAGCAAAAAGTTGATAAAaagaattataaattgaaatgcAAAGTCTGTGCGAAACAATTCACCTATCAGAAATCATTTCTTTCCCACATCAAGAACCACCCTGAATACGAGAGATCAGAGACAACAGATAATCATTCCGAACAATTAGAAACGATAGAAGAATCGTTGGAACATCAAAATGATTTGTCTAATtctaaaataaatgaatctgATGACGATGATTTGCCACTTGAAGGTCTGCAGTGTACCCAGTGTGGCAAACTTTTCGCAACAAAGGGGAATCTGAAAAGGCATATTTTAACACATAGCGGTCTTAGATTCAATTGTTCAACATGTGGAAAAGAGTTTTCGCGACTAGATAAACTCAAAGATCATGAACAGTCTAAACACAAAGAGGAAATATTTGGTCCATCGAGTGACGAAGATGACGACACAGATAATGAAGGTAAACCAAGCGATGGGACGGAATCCAGAAAAAAGGAAAAGAAATGCAGACCTCATCAGTGTGCAATGTGTCCGAAGGCTTTTGCCCAGCCTCAATCATTGGCCAACCACATGGAGAGACACAAACGCGTAAAAGAACCTCAGAAACGTTTCCTTTGCGAAGTGTGCAGCAAGTGTTTTGCCCAAAGCGGATCGCTTGTAGCCCATATGCGAACTCATACAGGAGTCAAACCATATGTCTGTAACGTATGCAGTAGAGCATTTACTAAAAGTACATATTTACAGTTACATCTGCGTACGCACAGCGGCGAAAAACCCTACATATGCCAATACTGTAGCAGAGCATTTGCCAGAGCTAATACACTGGCTAGACATATAACTATGCATACAGGAGAAGCTAAATATCATTGTCAAATATGTATGAAATCTTTCAGACGATTGACCTCTTTAAACGAACATACTTATACCCATACTGGTCAGAGGCCATACGCGTGTAAAATTTGTTCCAAACGATACAATAACGCCGGCTCTTTATATGCACATACTAAAAAATGTAGGGCACAACAATTGTCAGGATCTGCTCCAACTTATACAGTTTCGGTTGAAAATACCAATCATCATGACTCTGGCCCAGTACCACAAATGTTGATTTATGCACCGAGAAAAATTGTCGCTAATGAACCGCAAACGACTCAAGGTCCGACCCCACAGTTTATGATCACAAGTGTACAGAGTCAAAAATCTTTGCCAACTACTATTGGTCAACGATTTGTTGGGGAGGATCcccatttttattccattgatggaaaacaattgaaaaatccTTACTATACGATATATCCCAACATGTAA
Protein Sequence: MEVEKTEEGAENISELQSTSYHECRVCLKNSNEFWELFENDHDIPRKIMAFASIQIEHGDGLPSVICFPCRQLLDVSYDFKCQVERSDASLRKILLTKIEVIQDAGKESLSQSVNDVITEAIADEIPNDHIELKDFELHNEAKILTLQDIKNVVLNDYDNKQEVVTYGINEECEGGNESLHEEETRERNGDDEIDDKNIDKHDLGGPEIIASLENSEVLLENEEVTVEKLIDVTDQRMESKTEPIKQEELLLPEDSDMSEGEEDDHQTDEIIFNGEDLKFELKNNSLSEREDEIDEASSESSKLKTMNSQISSGEINDSDEEKPLISRTSRQKCPHCIKSFATNLALQRHMAVHKHKTKLRYVCYLCDKQFSNVAKLKNHVSNNHDSLKNDNRIDIDNNCGRVETDRKIDKLEKDIGGSIDKQKVDKKNYKLKCKVCAKQFTYQKSFLSHIKNHPEYERSETTDNHSEQLETIEESLEHQNDLSNSKINESDDDDLPLEGLQCTQCGKLFATKGNLKRHILTHSGLRFNCSTCGKEFSRLDKLKDHEQSKHKEEIFGPSSDEDDDTDNEGKPSDGTESRKKEKKCRPHQCAMCPKAFAQPQSLANHMERHKRVKEPQKRFLCEVCSKCFAQSGSLVAHMRTHTGVKPYVCNVCSRAFTKSTYLQLHLRTHSGEKPYICQYCSRAFARANTLARHITMHTGEAKYHCQICMKSFRRLTSLNEHTYTHTGQRPYACKICSKRYNNAGSLYAHTKKCRAQQLSGSAPTYTVSVENTNHHDSGPVPQMLIYAPRKIVANEPQTTQGPTPQFMITSVQSQKSLPTTIGQRFVGEDPHFYSIDGKQLKNPYYTIYPNM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01413609;
90% Identity: iTF_01413609;
80% Identity: -