Basic Information

Insect: Tenthredo scrophulariae
Gene Symbol: -
Assembly: GCA_963978835.1
Location: OZ022229.1:19281957-19289585[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0001 0.013 16.7 1.4 1 23 476 498 476 498 0.96

2 18 2.2e-05 0.0027 18.8 1.9 1 20 504 523 504 526 0.94

3 18 3.4e-05 0.0042 18.2 0.7 1 23 532 554 532 554 0.98

4 18 8.4e-05 0.01 17.0 4.4 1 21 560 580 560 582 0.95

5 18 2.6e-05 0.0032 18.6 4.6 1 23 588 610 588 610 0.99

6 18 2.6e-05 0.0032 18.6 5.3 1 23 616 638 616 638 0.97

7 18 9.9e-06 0.0012 19.9 7.1 1 23 644 666 644 666 0.97

8 18 9.6e-08 1.2e-05 26.2 2.7 1 23 672 694 672 694 0.98

9 18 7.1e-05 0.0088 17.2 6.7 1 23 700 722 700 722 0.97

10 18 2.2e-05 0.0027 18.8 5.8 1 23 728 750 728 750 0.98

11 18 5.9e-07 7.3e-05 23.8 2.9 1 23 756 778 756 778 0.98

12 18 8.7e-06 0.0011 20.1 7.8 1 23 784 806 784 806 0.98

13 18 2.7e-05 0.0034 18.5 9.1 1 23 812 834 812 834 0.98

14 18 3.6e-05 0.0045 18.1 7.5 1 23 840 862 840 862 0.98

15 18 0.0017 0.21 12.9 8.8 1 21 868 888 868 890 0.94

16 18 1.3e-05 0.0016 19.5 0.4 1 23 896 918 896 918 0.98

17 18 0.031 3.9 8.9 4.5 1 23 928 950 928 950 0.98

18 18 5.1e-07 6.3e-05 24.0 1.3 1 23 956 978 956 978 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0001	0.013	16.7	1.4	1	23	476	498	476	498	0.96
2	18	2.2e-05	0.0027	18.8	1.9	1	20	504	523	504	526	0.94
3	18	3.4e-05	0.0042	18.2	0.7	1	23	532	554	532	554	0.98
4	18	8.4e-05	0.01	17.0	4.4	1	21	560	580	560	582	0.95
5	18	2.6e-05	0.0032	18.6	4.6	1	23	588	610	588	610	0.99
6	18	2.6e-05	0.0032	18.6	5.3	1	23	616	638	616	638	0.97
7	18	9.9e-06	0.0012	19.9	7.1	1	23	644	666	644	666	0.97
8	18	9.6e-08	1.2e-05	26.2	2.7	1	23	672	694	672	694	0.98
9	18	7.1e-05	0.0088	17.2	6.7	1	23	700	722	700	722	0.97
10	18	2.2e-05	0.0027	18.8	5.8	1	23	728	750	728	750	0.98
11	18	5.9e-07	7.3e-05	23.8	2.9	1	23	756	778	756	778	0.98
12	18	8.7e-06	0.0011	20.1	7.8	1	23	784	806	784	806	0.98
13	18	2.7e-05	0.0034	18.5	9.1	1	23	812	834	812	834	0.98
14	18	3.6e-05	0.0045	18.1	7.5	1	23	840	862	840	862	0.98
15	18	0.0017	0.21	12.9	8.8	1	21	868	888	868	890	0.94
16	18	1.3e-05	0.0016	19.5	0.4	1	23	896	918	896	918	0.98
17	18	0.031	3.9	8.9	4.5	1	23	928	950	928	950	0.98
18	18	5.1e-07	6.3e-05	24.0	1.3	1	23	956	978	956	978	0.97

Sequence Information

Coding Sequence: ATGAACGGGGAGCAGCATGCACTGCCAGCGACTACGCAGGGGCAGCAAGAGGAAGTAAACGTGGGTCAAAGTGGTCGCCCATCGTATCCAAGTGGATTGGCGACTGGATCCGGTATTGGGAACGTAGGAAGTATTCCCCATTCTTCGTCAGATCTTCGAGTAGGTACAGCCGTAGCGTTAGCCTCTTCGGTAGCTAAATATTGGGTCCTGACCAATCTGTTTCCTGGGGCGCCGCTTCCTCAGGTTTCTGTATATCACCACTCCCATCATAATTCCTCGCATAGAAGTGCGCCTGGTGATTCTACTAATAAGGAATCTGCTGCGGCTTCTTTATCTCAAGAAATGGCATTGGCTCAAAATTCCCACCAACAGGCATCTACTTCGCATCATCATCAACAAACTTCGGTTAATAACAACAATCAACATAACTCCCTCCACCCAAATTCACAGATCCCAGTATCGCTGCCTGGTCTCAGTTTAGACGGTACTCACATACCCCCAAGTGTTAGCCACTTGCACGCAGCCCACGCCCAAATGCAACAACAAATGCAGTCCCAGCAGCAATTGCatcagcaacagcagcagcagcagcaacagcaacagcagcaacagcaacagcaacaacaacagcaacaacaacagcagcagcagcaacaacagcaacaacagcagcagcaacaacaacaacaacagcaatcGCATCATCAAATGCAGAATCATCAGACTAGTCAAAACAGTGGACATAGTCCGCAAAATCAGTCTAGCAGTCAGcgagatgaaaataaagtaaaagacGAAGGTGGTAGTTGCACAACAGAGAGGTGCAGCGATAATCAAGTTCATTGTCAGGTCCAATGCGATCTACAACTTCAGCCACAGGCTCAAACAGATATGCAACAGAATTTAatgcaacaacaacaacaacaacaacaacaaattgGGGTCAATATAGGCGGTAATAGCGCTAATGATGGTGGTAATCAGAATAATTCTGATGGTTTGAAAactgagaaagaaaaagagatgaGACAGCATAGTATGGCGCAaTTTCAGTTACCTGATCTTAAACCTGGCGGACATATGATGGACGTTAGAACGGCTGATGGTTCAGTTGTGAAAATTAGCGCTGGAAGCGAGCAGGATCTTGCTAAAACACTAGGCGTTGAAATGGTACAAAATATGTACAAGgTGAACGTCGAAGATATAAATCAACTCCTTGCCTACCATGAGGTTTTTGGTAAACTACAGAGCGAAATAGCTGCTGGAACAACCCTCGTCGGTGGTACTGTTCCTACCCAAACAGTTACCACTATACAAAATGGTACTCCAATCGTACAACAAGtacaattaaataaatttgacaTCAAGACAAGCGACGGAGAAGCTACACCCGGACCAAGCGCTTCTCCTGTATCAGTTGGGAGCCATGCTTGCGAAGTTTGCGGAAAGATATTCCAATTTCGTTATCAACTTATTGTACATCGCAGATATCACACTGAAAGAAAACCTTTCACATGCCAGGTGTGTGGTAAAGCATTTACAAATGCCAACGACCTGACGCGTCATGGTAAATGCCACTTAGGAGGTTCAATGTTTACTTGCGCAGTCTGTTTCCATGTATTTGCTAACGCACCGTCATTGGAACGACATATGAAAAGACATGCTACTGATAAACCGTACAATTGTACAGTTTGTGGAAAAAGTTTTGCGAGAAAGGAACACTTGGATAATCACACTAGATGTCACACAGGCGAAACACCCTACAGATGTCAGTATTGCGCTAAGACATTCACTAGGAAGGAACACATGGTTAATCACGTGCGAAAACACACTGGTGAGACTCCGCATCGATGTGATATATGCAAGAAGAGTTTTACCAGAAAAGAGCATTTTATGAATCATGTTATGTGGCATACTGGAGAAACTCCACATCATTGCCAGGTTTGCGGTAAGAAATATACCCGCAAAGAACATCTGGCTAATCATATGCGATCACATACCAATGATACACCCTTCCGTTGTGAAATTTGTGGTAAGTCGTTCACGCGGAAGGAGCACTTCACGAACCACATAATGTGGCATACCGGAGAGACTCCGCATCGCTGTGACTTCTGCTCAAAGACGTTTACACGGAAGGAGCACCTACTGAACCACGTTCGTCAGCACACGGGTGAGTCCCCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAATCACATCCGCCAACACACAGGGGAGACGCCATTCCGCTGCCAGTACTGCCCAAAGGCCTTCACTCGTAAGGATCATTTGGTTAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCGTTCACGCGGAAGGAACATTTGACCAATCACGTGCGTCAACATACAGGCGAATCGCCACACCGATGTCACTTCTGCTCCAAGTCGTTTACTCGAAAGGAACACCTGACCAATCATGTTAGAATTCATACTGGGGAATCACCGCATAGATGCGAGTTCTGCCAGAGGACATTTACTAGGAAAGAACATCTCAATAATCATCTTCGACAACATACTGGCGAATCTTCACATTGCTGCAATGTTTGTTCTAAACCGTTTACCAGGAAGGAGCACCTCGTCAACCATATGAGATGTCATACTGGGGAGCGTCCCTTCGTATGTACCGAATGTGGCAAGAGTTTCCCACTTAAAGGAAATCTTCTTTTCCATATGCGATCCCACAACAAAGGCAGTAACGCCGAAAGACCATTCAGATGCGATCTCTGTCCAAAAGATTTTATGTGCAAAGGTCACTTGGTATCTCACAGACGGTCTCATTCCGACGAAAGACCCCACAGCTGTCCAgattgcggtaaaacttttgTAGAAAAAGGAAACATGCTTAGGCATCTCAGAAAGCATGCCGCAGAGGGACCTCCCACTCAAGTTGCAACACCTTCGGCTATACCGCAGCCAGGAGGTTTGCCAATTCCAACGGCTGCCGTTCTAGTTGGACATCCATTGGCTCCTCCAGCTCCACCGGTTGTGCCCCAACATACAGTCGTCGTGCCGACGCCACCCGGAGTTTTGACTTCGTATTGA
Protein Sequence: MNGEQHALPATTQGQQEEVNVGQSGRPSYPSGLATGSGIGNVGSIPHSSSDLRVGTAVALASSVAKYWVLTNLFPGAPLPQVSVYHHSHHNSSHRSAPGDSTNKESAAASLSQEMALAQNSHQQASTSHHHQQTSVNNNNQHNSLHPNSQIPVSLPGLSLDGTHIPPSVSHLHAAHAQMQQQMQSQQQLHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSHHQMQNHQTSQNSGHSPQNQSSSQRDENKVKDEGGSCTTERCSDNQVHCQVQCDLQLQPQAQTDMQQNLMQQQQQQQQQIGVNIGGNSANDGGNQNNSDGLKTEKEKEMRQHSMAQFQLPDLKPGGHMMDVRTADGSVVKISAGSEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGGTVPTQTVTTIQNGTPIVQQVQLNKFDIKTSDGEATPGPSASPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFTNANDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGESSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVATPSAIPQPGGLPIPTAAVLVGHPLAPPAPPVVPQHTVVVPTPPGVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899003;
90% Identity: iTF_00060523;
80% Identity: -