Basic Information

Insect: Tenthredo scrophulariae
Gene Symbol: bab1
Assembly: GCA_963978835.1
Location: OZ022229.1:27924038-27926540[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.8e-08 1.9e-05 25.0 0.0 2 37 205 240 204 247 0.88

2 4 3.3e-10 3.6e-07 30.6 0.0 5 39 258 291 254 296 0.87

3 4 0.86 9.3e+02 0.4 0.0 26 34 332 340 325 345 0.83

4 4 7.8e-10 8.4e-07 29.4 0.0 4 39 371 406 356 412 0.94

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.8e-08	1.9e-05	25.0	2	37	205	240	204	247	0.88
2	4	3.3e-10	3.6e-07	30.6	5	39	258	291	254	296	0.87
3	4	0.86	9.3e+02	0.4	26	34	332	340	325	345	0.83
4	4	7.8e-10	8.4e-07	29.4	4	39	371	406	356	412	0.94

Sequence Information

Coding Sequence: ATGTCCGAAGGCGATAGTCCGTCGAGCGGTGGTCAACAACAGCCCTCAATATCCCAAAGTTACTGTTTCAAATGGAACGATTACGAGAATCAAGTACCATGCGTTATTCGGCAATTGTTAGAAGAGAACTCCATGGTGGACGTTACCATTTCTGCTGACGGAATCAAGATTCATGCTCATCGCATCGTATTGTCTGCTTGTAGCATCTTCTTTCAAGAAGTATTAAACCAAGTTAACGAAGACTCTCCGACTATAATACTAAGCGGTGTATCTGCGCAGGATATTCGTTGTATTATAGATTTTATGTATAATGGCGAAGTCAGTATACCAGTCGAGAATATCAGCAGTTTGTTGGACGCTGCTCATTTTTTGAAGATCCATGGCCTTATGgagATCGATGGTTTGGACGAGAGTGACGGTGCAACGTGTGAAGATTTTAGTGAAGAGACTGTGGAATCGTTAAGTGAGATTAACGAGGCTGAAGATCAAGATTTGAATGCATTAGAACAGGAGTTTGAGAATGTCACTAATAATTCTTTGGATGAAAACAACGTCTCGactaaaaatctgaaaaaaaaacggagacGAGATACGGCTAAGAAAGAATACAGCGAAGACATGCTTATAGCTGCTATAAACGACCTGAGGACAGGGCACACTTTGATAGAGGCTGCAACTAATCACGGAATACCACGATCTACTTTGTATATGCGAGCCAAGGCCTTAGGCTTACATCTAAATGCTTCTAGGAATGAATATTCCGCAGAATGTATGAAGGGGGCGATAAATGCTGTGTTAGaGGGTTCAAGCTTGCAACAGGCCTCGGAAATGTTTTCTATACCTAAAACCGTACTTTGGCGAAGAATTCAGAAGGAAGGATACCAAATACTCGGCCAGCGTACCGAAATGAAGAAATCTTATGACGCCGATAAAAGGGAAGCTGCAGTCAAAGCATTGGAGCGAGGGGAAAATCTCACCAAAGTTTCTTTGCAGTTTCAAATACCAAAAACGACATTATTTCGAGACAAAGCTAGACTAGTAGATGAGGGAAAGCTTCCATTGTCCTTTTGGAAGAAACGTAAAACTGAAAACGAAGATTTAAAGAAATCACGACTGGAAGAAGCAGTAGCGGCTTGTAAGTGTGGGAGAATGTCCCAAGCAGCAGCATCTATGGCTTATCGAATCCCGAAAACTACGATATGGAGAAGGCTGCAGCAGGAtggaaaaaaactaaatactCCAGTGGATGACGCGAGTCAACAAAAATCTGACGATCTGGACGATATCGATGACCAGAAGGAACAAGGAACTGAATTCACGTATTGCGAGGTCACTTCGGAGATACCGATAACATACATAGACGAAAACGGCATACCAGAAGATTCGGTGATAATTTTAACGACTGACGATGTGGATGGTATGAATCTAGAAGAAGGTACCCAAATAATAGTAAGTTCGGATTCCGCTCAAGAATACGTACCCTGCGCATTAAACATTGAAGACAGCTCAAATTACACTAACAGTGAAAGTTAA
Protein Sequence: MSEGDSPSSGGQQQPSISQSYCFKWNDYENQVPCVIRQLLEENSMVDVTISADGIKIHAHRIVLSACSIFFQEVLNQVNEDSPTIILSGVSAQDIRCIIDFMYNGEVSIPVENISSLLDAAHFLKIHGLMEIDGLDESDGATCEDFSEETVESLSEINEAEDQDLNALEQEFENVTNNSLDENNVSTKNLKKKRRRDTAKKEYSEDMLIAAINDLRTGHTLIEAATNHGIPRSTLYMRAKALGLHLNASRNEYSAECMKGAINAVLEGSSLQQASEMFSIPKTVLWRRIQKEGYQILGQRTEMKKSYDADKREAAVKALERGENLTKVSLQFQIPKTTLFRDKARLVDEGKLPLSFWKKRKTENEDLKKSRLEEAVAACKCGRMSQAAASMAYRIPKTTIWRRLQQDGKKLNTPVDDASQQKSDDLDDIDDQKEQGTEFTYCEVTSEIPITYIDENGIPEDSVIILTTDDVDGMNLEEGTQIIVSSDSAQEYVPCALNIEDSSNYTNSES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01411401;
90% Identity: iTF_01303579;
80% Identity: iTF_01414343;