Tmes008346.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tenthredo mesomela
Gene Symbol
-
Assembly
GCA_943736035.1
Location
CALSEY010000077.1:1308222-1311395[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.0033 0.69 11.8 0.5 6 21 248 263 245 264 0.92
2 13 0.0017 0.36 12.7 1.9 1 23 270 292 270 293 0.94
3 13 0.0033 0.7 11.8 0.9 2 23 306 328 306 328 0.96
4 13 0.078 16 7.5 0.9 3 23 342 362 342 362 0.92
5 13 1.3e-07 2.7e-05 25.7 1.4 2 23 394 415 393 415 0.97
6 13 0.0065 1.4 10.9 0.4 1 23 420 443 420 443 0.91
7 13 2.1 4.4e+02 3.0 1.6 2 23 525 546 525 546 0.96
8 13 0.00014 0.029 16.2 1.5 1 23 555 577 555 577 0.96
9 13 0.0016 0.33 12.8 3.5 1 23 586 608 586 608 0.97
10 13 0.021 4.3 9.3 3.3 1 21 614 634 614 635 0.95
11 13 4.5e-05 0.0093 17.7 2.4 1 23 665 687 665 687 0.99
12 13 0.16 34 6.5 0.0 1 23 758 781 758 781 0.97
13 13 3e-06 0.00062 21.4 3.5 1 23 786 809 786 809 0.96

Sequence Information

Coding Sequence
ATGACTACTACCATGAAACAGGATTGGAATAAAGCCTGCAGACTTTGTTCAGAAGAAAAGGCAGAAATGTTGTCAATATTTGGTACTGAAGGTATGCAGAGAAAAGTAACTCAGAAAATGAGAGCATGTTTTCCTGTTATGGTATACAAAACAGATCCGTTACCAAAACAGATATGTCAATTTTGTGCTGCGCGATTAGACGACGCATATGAGTTCAGAGAACATTGTCTAGGTGTATATAAAAAAATGCATATACAACTGTTGGCTTCAAAGGAGGAGTCTGAAACTGTTGAAATATTTTTAAAAGCTATGCAAAATTCACCGGATCCATGCCAGGCGCAGTTATGTAAAGAAAAAGCCAGAGCCCCTCCGCCGCTGGTTCCATTGCCGAGTTCTTCTTTGCCCTCAGATAAATCATTGGGTTCTGTTATTCTGAAAAAAGCCCAAGATTCTAACATCACCGGTGTATCTTTGGTCGAACTTCCATGCGAAGTACAGATCAAAGAAGAACCAATGGATTTGTTAGATGGAAATCGGTCTGTTTTAAATTCTGGAAGTATAACTGCCGAGGAATTGTTCAATTCGGTACGTAACGAGAGAACTGAGATGAACTCGAGGAACGGTAACGGTAACGGTGGCACAAGTATTCTGGAACAAGTATTGACCGGAAATTTGACTATAAATGATCGCAAAGAACCTGAACCAAAATTTAAACTTAGCTCTAAATGGTGGTGTGCTCCGTGCAACAGATACTATAGAACAAAAGACAGCCTGAGAAAACACATGCGACTATTCTGCCCTAGGAGATATAAGTGCAAAAAATGTACAAGCGTATTTAAAACTGTTGAAGAACTTGCCAAACACGAAGGATCTCATCATTTAAAAGTAACATTAAACTTTGACGAATGTGTTAACGAGTGCGATCAATGCGATAGAGAATTTGTCAGCTGGGAAATACTCAGGCATCATAGACAGAGAGATCATCAGCAAAGTCCTGCGACTGCAATTGATACAAACACTTGGTGTTCGCCGTGTAATAGATTTTTTCCAACGCTTGATTCGTACCAGAATCATAAACAACTTCATCAGCCAGATTTGGCCTCTATATTACCTGTGACTAACGCGCGAGCGGATAACTTATTCAATAAAAATCATTACGTAGAAAATATGAAACTGCTTATGTGTCCGACTTGTGGAAAGGTCTGTACGCAGCAAAGCGCTTTGTCAAACCACATGCGAACACATGAGCCTAAAAAACATAAATGTGAAATTTGCGGTCGATCTTTTGGACTCTTTATTCGACTCGCAGCGCACAGACTTAGCGAACATAATCAACAGCCAATTATGTCGCCGGTTATGACCAGTGTTGAACAAGAAGAAGCACTCAACGCTGAGAGAGAAGCTAGAGAAGCCAGGGAGGCTGGAGAAGTAGGGGAAAGTGCAGCCGGCGAAGGGAGCAATAGAAGTTACACCAAGGGATCTGATGACGAGGACATGTTCATGGACAGTTTGGCCCGTGCCAGTATGATATCTGTAAATAACGCGAATGTTAGTACGTCTAAGAACGTTGCACGTTGCGGTATTTGTTTGCAGTGGTTCAACGATCACACGACGATGCTCACTCATCTTCAAACACACTCGGAGAGTTACGTTTACAAAAGCTTCAACTGCCGTGTCTGCAAAAAAACATTTAAAGAGAAATGGCAGCTACTTCGTCACGAGATTTCACACAAACGAGCGGCGAACGCAGTTCTATATACTTGTTCAACTTGCAAAAAGACTTTCAAAGACAAAGCCCAGCACAAGGCGCATGAGGCTACTCATGTTGTAGATAAAACTTATCACTGTCCAAGATGCAACAAGATATTCTTCAAGGAGTTCTCTCTTCTTGCGCATCAGTGCAGTTCCGGAAGTAGTAAAACATTTGGAAAACGAGGGGCGAACAGCAAGGCTTCTGCCAAAGCTACTATATCCTTTGGTGCTTTTAAGAAGTATAAATGCTCCAAGTGTAATGCTACGTTCAACAATTCTCAGTCAAGAAATTCCCACATGAGAGTACATACACAGGCGCATGCAATGCTCCAAGTCCGAAAAAAAGAACTAAAAAAAGAATTAGAAATGTCTAAAGCTATGCCAAAATTAAAACCAGAAGACGCTTCGCCAGGTACTTCGGTTACAACTCAAAAAGAAACTTTGGCTGAGGTCAAAATTGAGGATTCTACTGCCGCACCACCTGCCCTTAAACGTACCTTGATAAGGACTGCTGGGGGATATCGCTGCGGAGTTTGTCAGTCACCGTTTGTCCTTAGAGAATTGGCGGTGGCTCATTTGAGATCAGCACATCCTGCGGCACCGTTTAACTGCCCACATTGTAAGAAGCAGTTTTCAACCCGTTATACGCTAACGCGTCATGTTGAGACTGTCCACCCTGATGAATCGGAGAAATAA
Protein Sequence
MTTTMKQDWNKACRLCSEEKAEMLSIFGTEGMQRKVTQKMRACFPVMVYKTDPLPKQICQFCAARLDDAYEFREHCLGVYKKMHIQLLASKEESETVEIFLKAMQNSPDPCQAQLCKEKARAPPPLVPLPSSSLPSDKSLGSVILKKAQDSNITGVSLVELPCEVQIKEEPMDLLDGNRSVLNSGSITAEELFNSVRNERTEMNSRNGNGNGGTSILEQVLTGNLTINDRKEPEPKFKLSSKWWCAPCNRYYRTKDSLRKHMRLFCPRRYKCKKCTSVFKTVEELAKHEGSHHLKVTLNFDECVNECDQCDREFVSWEILRHHRQRDHQQSPATAIDTNTWCSPCNRFFPTLDSYQNHKQLHQPDLASILPVTNARADNLFNKNHYVENMKLLMCPTCGKVCTQQSALSNHMRTHEPKKHKCEICGRSFGLFIRLAAHRLSEHNQQPIMSPVMTSVEQEEALNAEREAREAREAGEVGESAAGEGSNRSYTKGSDDEDMFMDSLARASMISVNNANVSTSKNVARCGICLQWFNDHTTMLTHLQTHSESYVYKSFNCRVCKKTFKEKWQLLRHEISHKRAANAVLYTCSTCKKTFKDKAQHKAHEATHVVDKTYHCPRCNKIFFKEFSLLAHQCSSGSSKTFGKRGANSKASAKATISFGAFKKYKCSKCNATFNNSQSRNSHMRVHTQAHAMLQVRKKELKKELEMSKAMPKLKPEDASPGTSVTTQKETLAEVKIEDSTAAPPALKRTLIRTAGGYRCGVCQSPFVLRELAVAHLRSAHPAAPFNCPHCKKQFSTRYTLTRHVETVHPDESEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00060600;
90% Identity
iTF_01411803;
80% Identity
-