Tmes016306.1
Basic Information
- Insect
- Tenthredo mesomela
- Gene Symbol
- clz9
- Assembly
- GCA_943736035.1
- Location
- CALSEY010000176.1:420035-422155[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-07 0.00011 23.2 0.0 7 38 21 53 15 59 0.84
Sequence Information
- Coding Sequence
- ATGGTGAGAAATTATAAACGCAAAACTGAAAGGGCCGATTTAGATGAACAGGCCGTGGTTTCTGCAGTCAACGAAGTCATCGCTGGGACACTGTCTATCAGAAAAGCGGCTGACAAATATGGTTTAAAACCAGGTACGTTGCAGCACCGAATAGAAAAAAGAAGGAAAGAGGAAGAGCAGGGTAAAGAAACCAAAAAATTCGCGTCCAAATACACCTCGCAACAGGTATTTACTGCTGAACAAGAAAAGATGTTGACTGAATACATAGCGACTTGTAGCAAaatgcattatggtctcactcttcagcaagtcaaaactcttgcttatgagtatgcgaaacaagtcaacagtcaatatccatcgaaatgggacgaaacgaagagtgcaggcacagattgggtgtccggatttcgcaaaagaaacgcgagcatcagcttacgtaagccagagaacactagcgcggctagatcgtttagtttcaataaaactgccgttggtgaatacttcaacaacctggaagcggtacttatacgctacaaatttactcctgatcgtatcataaacttcgacgaaactgggattagcactgttcttaacacacctaaagtattagctgagaaaaagcaaagacaagttgggcaaatcgtgtcagcagaacgaggagaccttgtcaccttttgtggcattgtatcggctatcggaaatccgattccaccaatcttcatatttccacgggtacattacaaggaacattttctaaacggcgctccagaaggtagtgtcgggttggcggtcaaaagtggttggatgaatgctgatctttttttggtagcgttgcagcacgtacaaaagcatacttcaagtacgaaagataatcctgttctactgttgtgtgacaatcatgaatcccatatctcgatcgaagctatcaattttgcacgtgaaaatgggattgtcactttgacgttccccccgcatacatctcacaagctgcaaccgcttgatgtgggagtctttggacctttcaaaggcaaattaaaaattgcgttcaatgactggcacctcaacaatcccggaaaaactttgtcaatttatgaCATTCCGAAGCTAGCCAAAATTGCATATTTTGAGTCATTCACTGGAAAGAATATTACAAACAGCTTCAATAAACCGGGCATTTGGCCTTTCAACAAATTAGCCTTTTCTGATGAGGATTTTGCGCCCGTAAAAATCTACACGAATAGTTCCGTCACACCCTCCAATACTTCGGACGCGACGCCAATTCCAGTTGAGAAACGTATTACATCGGCTTTGATAACAGTCATACCACCCGATGCTGTCAGGCCATATCCAAAAGTGCCACAGAGAGAAGAGAAAAAAAGAGGAAGAGAGCGTGGGAAGTCGAGAATATATACAGACACACCAGAAAAGAATAGACTTGAAGAATTACGGGACGTGAGAGAAGGAAAAAAACTTGCAAAGGAACGAGCGCAACGAACCAAAGATTTAAAGAAAGCTAAAAAATTACTAGGTTTCGATTCGAAAAGTGACGGGAAGAGGGCCGAAACAGCAAAAAGGTCGAAGAGAGCTCGAATTGAAAGGATTTCGACAAGTTCTTCTGACAATGCTGAAACTTTAAATTCTTCAAAAGAAGATTCTCCCGGCGCTCAACCGTCTGATGATGATGATTTGATCCCGCCATCCCGACCTTCCACTAAGGCGATACAAGAAAATGACTTTTTACTAATAAAATTCGAGAAAAAGAAGTCTGTCGTTCATTACATTGGAAAGGTGATTGCCAAGTATGATAATACTGAGTATCAGGTATCTTATTTAAGAAAGAAACCTGCCTCGTGGACTTTTGCCTTTCCCAAGATTGCTGATGAGGCATGTATTAATATTTCTGATGTGGTCATTAAGTTGCCAGAGCCAAGTGTGACTAAAGGCACCAATAGAGCTGCATCGCTTTTCAAATTTGCAGTTAACCTCTGTTCCTATGATGTCCAGTAG
- Protein Sequence
- MVRNYKRKTERADLDEQAVVSAVNEVIAGTLSIRKAADKYGLKPGTLQHRIEKRRKEEEQGKETKKFASKYTSQQVFTAEQEKMLTEYIATCSKMHYGLTLQQVKTLAYEYAKQVNSQYPSKWDETKSAGTDWVSGFRKRNASISLRKPENTSAARSFSFNKTAVGEYFNNLEAVLIRYKFTPDRIINFDETGISTVLNTPKVLAEKKQRQVGQIVSAERGDLVTFCGIVSAIGNPIPPIFIFPRVHYKEHFLNGAPEGSVGLAVKSGWMNADLFLVALQHVQKHTSSTKDNPVLLLCDNHESHISIEAINFARENGIVTLTFPPHTSHKLQPLDVGVFGPFKGKLKIAFNDWHLNNPGKTLSIYDIPKLAKIAYFESFTGKNITNSFNKPGIWPFNKLAFSDEDFAPVKIYTNSSVTPSNTSDATPIPVEKRITSALITVIPPDAVRPYPKVPQREEKKRGRERGKSRIYTDTPEKNRLEELRDVREGKKLAKERAQRTKDLKKAKKLLGFDSKSDGKRAETAKRSKRARIERISTSSSDNAETLNSSKEDSPGAQPSDDDDLIPPSRPSTKAIQENDFLLIKFEKKKSVVHYIGKVIAKYDNTEYQVSYLRKKPASWTFAFPKIADEACINISDVVIKLPEPSVTKGTNRAASLFKFAVNLCSYDVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01411428;
- 90% Identity
- iTF_01303265;
- 80% Identity
- -