Tamo011613.1
Basic Information
- Insect
- Tenthredo amoena
- Gene Symbol
- clz9
- Assembly
- GCA_963966615.1
- Location
- OZ016487.1:946285-947865[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-07 7.6e-05 22.9 0.0 2 40 16 55 15 59 0.92 2 2 8.2 5.3e+03 -2.2 0.1 24 30 363 369 363 369 0.86
Sequence Information
- Coding Sequence
- ATGGTGAGAAATTATAAACGCAAAACTGAAAGGGCCGATTTAGATGAAGAGGCCGTGGTCTCTGCAGTCAACGAAGTCATCGCTGGGACACTGTCTATCAGAAAAACGGCTGACAAATATGGTTTAAAACCAGGTACGTTGCAGcaccgaataaaaaaaagaagaaaagagggagAGCAGGgtaaagaaaccaaaaaattcGCGTCCAAATACACCTCGCAACAGGTATTTACTGCTGAACAAGAAAAGATGTTGACTGAATACATAGTGACTTGTAGCAAAATGCATTATGGTCTCACTCTTCAGCAAGTCAAAACTCTTGCTTATGAGTATGCGAAACAAGTCAACAGACAATATCCATCGAAATGGGACGAAACGAAGAGTGCAGGCACAGACTGGGTGTTCGGATTTCGCAAAAGAAACGCGAGCATCAGCTTACGTAAGCCAGAGAACACTAGCGCGGCTAGATCGTTTAGTTTCAATAAAACTGCCGTTGGTGAATACTTCAACAACCTGGAAGCGGTACTTGTGCACTACAAATTTACTCCTGATCGTATCATAAACTTCGACGAAACTGGGATCAGCACTGTTCTTAACACACCTAAAGTATTAGCTGAGAAGAAGCAAAGACAAGTTGGGCAAATCGTGTCAGCAGAACGAGGAGACCTTGTCACCTTTTGTGGCATTGTATCGGCTATCGGAAATCCAATTCCACCAATCTTCATATTTCCACGGGTACATTACAAGGAACATTTTCTAAACGGCGCTCCAGAAGGTAGTGTCGGGTTGGCGGTCAAAAGTGGTTGGATGAATGCTGATCTTTTTTTGGTAGCGTTGCAGCACGTACAAAAGCATACTTCAAGTACGAAAGATAATCCTGTTCTACTGTTGTGTGACAATCATGAATCCCATATCTCGATCGAAGCTATCAATTTTGCACGTGAAAATGGGATTGTCACTTTGACGTTCCCCCCGCATACATCTCACAAGCTGCAACCGCTTGATGTGGGAGTCTTTGGACCTTTCAAAGGCAAATTAAAAATTGCGTTCAATGACTGGCACCTCAACAATCCCGGAAAAACTTTGTCAATTTATGACATTCCTAAGCTAGCCAAAATTGCATATTTTGAGTCATTCACTGGAAAGAATATCACAAACAGCTTCAATAAACCGGGCATCTGGCCTTTCAACAAATTAGCCTTTTCTCATGAGGATTTTGCGCCCGTAAAAATCTACACGAATAGTTCGTCTGAAGGCAATGTGAAAAATCAGGAGGTTTTGCCAACATCGGATGGAAATGTCCTACAGTTGAACGTACCTCAACCCTCGATGGAACCATCAACATCGTCAAATAACAGCGTCACACCCCCCAATACTTCGGACGCGACGACAATTCCAGTTGAGAAACGTATTACATCGGCTTTGATAACAGTCATAACACCCGATGCTGTCAGGCCATATCCAAAAGTGCcacagagagaagagaaaaaaagaggaagagagcgTGGGAAGTCGAGAATATACACAGAAACACCAGAAAGAACCTTGCAAAGGAACGAGCGCAACGAACCAAAGATTTGA
- Protein Sequence
- MVRNYKRKTERADLDEEAVVSAVNEVIAGTLSIRKTADKYGLKPGTLQHRIKKRRKEGEQGKETKKFASKYTSQQVFTAEQEKMLTEYIVTCSKMHYGLTLQQVKTLAYEYAKQVNRQYPSKWDETKSAGTDWVFGFRKRNASISLRKPENTSAARSFSFNKTAVGEYFNNLEAVLVHYKFTPDRIINFDETGISTVLNTPKVLAEKKQRQVGQIVSAERGDLVTFCGIVSAIGNPIPPIFIFPRVHYKEHFLNGAPEGSVGLAVKSGWMNADLFLVALQHVQKHTSSTKDNPVLLLCDNHESHISIEAINFARENGIVTLTFPPHTSHKLQPLDVGVFGPFKGKLKIAFNDWHLNNPGKTLSIYDIPKLAKIAYFESFTGKNITNSFNKPGIWPFNKLAFSHEDFAPVKIYTNSSSEGNVKNQEVLPTSDGNVLQLNVPQPSMEPSTSSNNSVTPPNTSDATTIPVEKRITSALITVITPDAVRPYPKVPQREEKKRGRERGKSRIYTETPERTLQRNERNEPKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01303265; iTF_01413093;
- 90% Identity
- -
- 80% Identity
- -