Tmes008570.1
Basic Information
- Insect
- Tenthredo mesomela
- Gene Symbol
- lolal
- Assembly
- GCA_943736035.1
- Location
- CALSEY010000078.1:87555-96462[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.4e-15 2.1e-12 47.9 0.0 2 42 306 347 305 350 0.94
Sequence Information
- Coding Sequence
- ATGTCGATGCagcaattttacgtcaagttctcagaccttaaaataatggtcgattttatgtattacggagaagtcaatgtctcgcaagatcaactaccCTCCATCATCAAGACTGCTGAAAGTCTGAAGATCAAAGGTCTTGCCGAAATGCATACAGCGTCTGTAACAAAGTGGCCAAGTGGTAGCAGCGAGCCAGGCGGAGGGGATAGAGGTGAATCTTGTTCTCCTAGTCCGTCGCCTCTGTCTCCTTCGTTGAGACGAAAAAGGCTGAGGAAAACATCTACCGGTTCCACTTCTGGTTCCGGTGAAAAGTCAGAGGAAATAAACGAAATTACATTAGTAGCTACCAACGTCGTCAAACCTGAACCATCAATTATAGCGCAAGAAGGCGGCGATCATTTACGAAGACCGTTGAATGCCAGCACAGAATCACAAGGAAGTATCGACGAAGACCAAATATCAATCATGAGTAATATGGAAAGTAGTTCTGCCACTACTCCGGCACAAAGCGAGGGATCGATGCAGGATATGAGTCAACAATCTGCGGGTAATGCAGCGCAGAGTTCCGCTGTTTCTCAACCGCCGGCCCATCAAGGATTGCAATGGACAATCATGGAGCACACGTATCCACGTTTCGCTTTGTCGTCATGTCAAACGAATCTGTCGATCCAAGCACCATCAGCTTTTACGACACCTGAAATAACGACGCCACCACCTGTCAGTGGTCAGTACTCAACTACAAGCACGACCGCATCTAGCTGCGCTCTGACCAACTATTCAAACTCTTCTCATTCAACGGTTCAACACTCCTCAGGCGGGACAACGCCACCGGCTCCGTGTACAACAAACTGCCAAAGTCCCTGCGCTAGCCCACAAACGGCAAACAAAAGAAAAAGATCTACAAATCCACAAGCTGATGAAAATTTTATTAGAGCTCTAGATGCCGTTCGGTATGGAGGGATAGGTTTTTGCAAGGCGGCACGTATGTTTGGTGTTAATAATCGAACTCTTTGGCTCGAGTATAAGAAGCGGGGATACCCTAACAATCGACCCAGTGTCAAATCCAGGGTAAAACAAGAAGTTAACGCTTCACCACCACCGACTCAACTCAGTCAGCCCATTAATTCTCAAAGCCCTTCGCCAATGGGGCCACCGTCTACCCCACACAGTACTCTGAATGCTCATACCACCCATACCATGCACATGGCACATACACCGCATACAATGTTGAGTGGATATCTAGACAACAGACACAGTGATTTTGCCCTTCAGACCATCCAATGCAAACAAGCAGGATCAAAACGTGGTCGGCTACTAATGCGTCAACCCCGTGTTAAAAAAGAGTCAGAACCAGGTCATCCATCGCCGGACAGTGAACCAGGCTCTCCTCACATTGTTGCCTCTCCTGTCAGCTATCCTCCTGCCTCTTCCCATCCTTCAACTCCGATTTTAAACCTCCCGCAACTTTCACAAACATGGGATGAAAGTCAGAGAACGCCATCCCCTCATATAACAGTAGTGAATCAACAGAGTTTATTGACCACTAACACTCCGACAAACCTTTTAACTGTCCCGCAACCTTCCTACCTAGTCAAACAGCATTCCCATCCATTGTTACCCAGTCAACAGCACAGTGTGTCCGGAAGTTATTTGATACATAGGCAACATTCGAACCCAGAATATCCTGGAAGATCAACTAGTCCTAGTATCGTAATAGATCATGCACCCTTCATCAAGACAGAAGACAGTGGTCACGGGGAAGGAAGAGATGGTAGAGATTCGGGAAGCAGCATTGGCGGATTAAGAGTAAGGACGGCCGAGTTAAGACGAAGTTCTTCTTCGCCACAGACCGGAGTCAGAGGTGAGATGAGACTGTCTCGGGAGGGATCAAGTGACCAACGTCTTGGTCATTGTCCGGTACAACGTCCTGGACCAGCTTTGGGCTGTAATCATTGTTGGAACACGATAGATGCACATGGCAGAATACTCAGGAGGAAGACTAAATATCACTGTCCCGAGTGTCAGACTAATCTGTGCATTGTACCCTGCTTCCAAGAATTCCATGAACGACAGAGGGAAGTCTCTACTTTAAGACCGCTACCAAAAACTAGCTCTATATAA
- Protein Sequence
- MSMQQFYVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASVTKWPSGSSEPGGGDRGESCSPSPSPLSPSLRRKRLRKTSTGSTSGSGEKSEEINEITLVATNVVKPEPSIIAQEGGDHLRRPLNASTESQGSIDEDQISIMSNMESSSATTPAQSEGSMQDMSQQSAGNAAQSSAVSQPPAHQGLQWTIMEHTYPRFALSSCQTNLSIQAPSAFTTPEITTPPPVSGQYSTTSTTASSCALTNYSNSSHSTVQHSSGGTTPPAPCTTNCQSPCASPQTANKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSVKSRVKQEVNASPPPTQLSQPINSQSPSPMGPPSTPHSTLNAHTTHTMHMAHTPHTMLSGYLDNRHSDFALQTIQCKQAGSKRGRLLMRQPRVKKESEPGHPSPDSEPGSPHIVASPVSYPPASSHPSTPILNLPQLSQTWDESQRTPSPHITVVNQQSLLTTNTPTNLLTVPQPSYLVKQHSHPLLPSQQHSVSGSYLIHRQHSNPEYPGRSTSPSIVIDHAPFIKTEDSGHGEGRDGRDSGSSIGGLRVRTAELRRSSSSPQTGVRGEMRLSREGSSDQRLGHCPVQRPGPALGCNHCWNTIDAHGRILRRKTKYHCPECQTNLCIVPCFQEFHERQREVSTLRPLPKTSSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00174947;
- 90% Identity
- iTF_01414083;
- 80% Identity
- iTF_01413516;