Tmes003166.1
Basic Information
- Insect
- Tenthredo mesomela
- Gene Symbol
- bab1
- Assembly
- GCA_943736035.1
- Location
- CALSEY010000025.1:122969-125465[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6e-08 2.9e-05 25.0 0.0 2 37 205 240 204 247 0.88 2 4 9.2e-11 4.5e-08 34.0 0.0 3 39 256 291 254 296 0.88 3 4 2.9 1.4e+03 0.4 0.0 26 34 332 340 325 345 0.83 4 4 4.4e-10 2.1e-07 31.9 0.0 4 39 371 406 356 412 0.94
Sequence Information
- Coding Sequence
- ATGTCCGAAGGCGATAGTCCGTCGAGCGGTGGTCAACAACAGCCGACAATATCTCAAAGTTACTGTTTTAAATGGAACGATTACGAGAATCAAGTACCATGCGTTATTCGACAATTGTTAGAAGAGAACTCCATGGTGGACGTTACCGTTTCTGCTGACGGAATAAAGATTCATGCTCATCGCATCGTATTGTCCGCTTGTAGCACCTTCTTTCAAGAAGTTTTAAACCAAGTTAACGAAGACTCTCCGACTTTAATACTTAGCGGTATATCTGCGCAGGATATTCGTTGCATTATAGATTTTATGTATAATGGAGAAGTCAGTATACCAGTCGAGAATATCAGTAGTTTGTTGGACGCTGCACATTTTTTGAAGATTCATGGCCTTATGGAGATCGATGGTTTGGATGAGAGCGATGGTGCAACGTGTGAAGATTTCAGCGAAGAGACTGTAGAATCATTGAGCGAGCTTAACGAGGCTGAAGAGCAGGATTTAAACGCGTTAGAACAGGAGTATGAGAACGTGACTAATAATTCTTTGGATGAAAATAACGTATCTACTACAAATCAGAAGAAAAAACGAAGACGAGATACAGCTAAGAAAGAATACAGCGAAGACATGCTCATAGCTGCTATAAACGACCTAAGGACAGGGCACACTTTGATAGAGGCTGCAACTAATCATGGAATACCACGATCTACTTTGTATATGAGAGCCAAGGCCTTGGGCTTGCATCTAAATGCTTCTAGGAATGAATATTCCGCGGAATGTATGAAGGCGGCGATAAATGCTGTGTTAGAGGGTTCGAGCCTGCAACAGGCCTCGGAAATGTTTTCTATACCTAAAACCGTACTTTGGCGAAGAATTCAGAAGGAAGGATATCAAATACTCGGCCAGCGTACTGAAATGAAGAAATCTTATGACGCCGATAAAAGGGAAGCTGCAGTCAAAGCATTGGAGAGAGGGGAAAATCTCACCAAAGTTTCTTTGCAGTTTCAAATACCAAAAACGACATTATTTAGAGACAAAGCTAGACTAGTAGATGAGGGAAAGCTTCCATTGTCGTTTTGGAAGAAACGTAAAACGGAAAACGAAGATTTGAAGAAATCGCGACTGGAAGAAGCAGTGGCGGCCTGTAAGTGTGGGAAAATGTCTCAAGCAGCAGCATCTATGGCTTATCGAATCCCGAAAACTACGATATGGAGAAGGCTGCAACAGGATGGAAAAAAACTAAATCGTCCAGCGGATGATCCGAGTCAACAAAAATCTGACGATCTGGACGATATTGATGACCAAAAAGAAGAAGGGGCGGAATTCACGTACTGCGAGGTCACTTCGGAGATACCGATAACATACATAGACGAAAACGGCATACCAGAAGATTCGGTGATAATTTTAACGACTGACGATGTGGATGGTATGAATCTGGAAGAAGGTACTCAAATAATAGTAAGTTTGGATTCTGCTCAAGAATACGTACCCTGCGCATTAAACATTGAGGACAGCCCAAGTTACACTAACAGTGAAAGTTAA
- Protein Sequence
- MSEGDSPSSGGQQQPTISQSYCFKWNDYENQVPCVIRQLLEENSMVDVTVSADGIKIHAHRIVLSACSTFFQEVLNQVNEDSPTLILSGISAQDIRCIIDFMYNGEVSIPVENISSLLDAAHFLKIHGLMEIDGLDESDGATCEDFSEETVESLSELNEAEEQDLNALEQEYENVTNNSLDENNVSTTNQKKKRRRDTAKKEYSEDMLIAAINDLRTGHTLIEAATNHGIPRSTLYMRAKALGLHLNASRNEYSAECMKAAINAVLEGSSLQQASEMFSIPKTVLWRRIQKEGYQILGQRTEMKKSYDADKREAAVKALERGENLTKVSLQFQIPKTTLFRDKARLVDEGKLPLSFWKKRKTENEDLKKSRLEEAVAACKCGKMSQAAASMAYRIPKTTIWRRLQQDGKKLNRPADDPSQQKSDDLDDIDDQKEEGAEFTYCEVTSEIPITYIDENGIPEDSVIILTTDDVDGMNLEEGTQIIVSLDSAQEYVPCALNIEDSPSYTNSES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01411401;
- 90% Identity
- iTF_01303579;
- 80% Identity
- iTF_01413491;