Tdis025688.1
Basic Information
- Insect
- Tenthredo distinguenda
- Gene Symbol
- Prdm15
- Assembly
- GCA_947538915.1
- Location
- OX384534.1:22219782-22224830[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.9 2.6e+02 3.1 0.2 2 23 238 259 237 259 0.94 2 14 0.0027 0.37 12.1 2.8 2 23 267 289 266 289 0.95 3 14 1.7e-05 0.0023 19.1 0.7 2 23 451 472 450 472 0.97 4 14 0.032 4.4 8.7 0.3 1 19 476 494 476 496 0.95 5 14 2.8e-06 0.00039 21.5 1.2 1 23 505 527 505 527 0.98 6 14 0.0019 0.26 12.6 0.9 3 21 533 551 532 552 0.93 7 14 0.00021 0.028 15.6 6.9 1 23 556 578 556 578 0.97 8 14 0.00022 0.03 15.5 0.2 3 23 599 619 597 619 0.95 9 14 0.0079 1.1 10.7 0.8 1 23 624 646 624 646 0.96 10 14 0.00017 0.024 15.9 0.1 2 23 652 673 651 673 0.96 11 14 0.0057 0.78 11.1 7.5 1 23 678 701 678 701 0.95 12 14 0.0034 0.46 11.8 4.4 1 23 707 729 707 729 0.97 13 14 0.001 0.14 13.5 3.6 1 23 735 758 735 758 0.96 14 14 0.043 5.9 8.3 4.9 1 23 763 786 763 786 0.95
Sequence Information
- Coding Sequence
- ATGAGTTTACCTGTTGCCGAGCGAAAAATCAACGAGACTGAAGTCAGCTTGTCAGCTTGCAGTGTTTGCGGACAACAACATGATACGACTACGTGTCCTTTCTTACTGGATCTCCAGCACATCAAAGATGCTCCAGTTTTGTCGAGAGCGAGACAAACGATACCCAAGAATCTTGAGGTGACCAGAATGGCCGATGGCTCGACGACCGTTATATCAAAGATTGAATTACCCAGAGGTACAACATTCGGACCGCTTTACGCCAAAAGGATATGGACTATGAATCCACTGACTCATTTCCCGATCAGAGTATTCGGGAACTCTGCCTCTGAAACATACCACTTGGATTATTCAAACGAGAATAACTCAAACTGGATGTGCTTCGTTGAGCCAGCTTCAAACGCTAAAGAACAAAACTTGATATGCTATCAGGTCAAGCAAGACATTTTCTACACTGCCATGCGGACTATAGCGATAGGGGAGGAACTCAGGGTCTGGTACGCGCCGTACTACGCTTTAAAGATGAAGATGCCGTTGTTTAACGTCGACTTTGCGAACGTTAGTGCAACAATTCCTGAGCCAGAGATACAGCAGATAATAAAAACTGAGTCGAGCAAAGATCAAATAGGATTACTGAACAAAGATGTAGCTCAGGAACTGGCCGAAAAATTACCTGCCCAACATTTGGGAGCGAGAGACGACAAGGCGACTTGGAACTGCAGAATCTGTTCGACTGTCATCTGCTCTGTGGTTGCATATGCCAAGCATTTGATGGAGCATTACAAGCCGTTGATCGGCGTTTACTGCAATATATGTAACAAGAAATGCAACAATGTTACGGCGCTGGAAAGACACAAGAATTCAAAGCACCCAGAGGAGTCGTCAAACGACAGTGTAGTCGGTATACCGACGTCAGAAAGCCAACAGCAACAAAATGCACAAACCGTATTCCTGAACATAAGTGATTCCGAAGGTCAGACATCGGATGCGATGAAAGATATATTGGAAAAATTTAAGGCAGGAAAAGCTATAACAGAGAGTAGTTTGTTGTCGACATCTTCAGTTAATGAGAAAGAAAATCACACCGATCTTCCGATTTTAGATACAAATTCCCTAAACGTGAACGATCTGCTTCAGAACAACAGTTCGTTGATAGAAAATTCCTCCCTTAAATCAATACTCGAAAACCAATGTCTGAACATGAACTTGGGGCTTAGTGCAATGACTGATTCTATGTTATCTGAAAATATCTCGGCTACTGATTCCGTAAAATTCAATGTCGAAGAGCTCGCCTCAGAGTTACTCGACATCGTACCTGACGTTGATAACATTAATAAAAGAATCGACAACCTAGAATGCGATATTTGTGACAAAAAATTTGATAAAGTTGATTACCTCTACCGTCATTTGCGGAAACATACCGGCGAGTTTATTTGCCCTTCTTGTCTAGCGGTATTTGCGAGGAAAGAAAACTTGCTATCGCATAATTGTTTTTCACAAAAATTGGACTACCATTATGAATGTCCTTACTGCCAGAAGCCTTTCATATTGAAAAAGTACTTGAGAAGGCATATGGTGAAGCATACAGAGTGGAATAACTGCAAGTGGTGTCATGCTCCATTCTCATCTCCCTCGGAGCTAGAAGCTCACAAATGTTCAAAACCAAGACATGAGTGTTTGCAATGCAACAAGCGGTTTGTTCACAGAGCTCATTTAAACCGGCACTTAAAATTGCATGAGAATCCTAAGCCGACGGTTAAAAGGGTGAGAAAAAAGCAGCCGGATAAACCGGTGATATGTGAAAAGTGTGGAGATGTTTTCAAAAGTCCTTACAGCTTGAAACAGCACCTTAGTTTGCACGGAGAGAGAGCTTTCGAGTGCGATATTTGCCAAAGGAGATTCCACCGCATCGGAGTACTGAAAGAGCACAAAGCTATACATCAAGCTGCTCAAATACCCTGCACTATTTGCGGGAAGAAATTGAAGAGCAAAAAGGCTCTAGATATCCACATGCTTTTGCATGGCAATAAGAAGCACCAGTGCGATAAGTGCGAAAAAAGCTTCTTCCAAAAATGTAATTACCTAAAACACTACAATCAAGTCCACGGTGATAAAAACACATACAAATGCGAGCACTGTACCTCCCAGTTCACAAACAAGTCTAGCTTCGACAAGCACGTTGAAAACCACACAAAGCCTGCTCAATTCATGTGCGCTTCTTGCCCTAAATCATTTCACAAGGAATATCAGTTAAAACGTCACACGCAGTCCAGTCACAGCGGAATAGTCTACCGGTGTCCATACTGCCAAATGGCTGGACGTCACAGGCACAGTATGCGACGACATTTCGAAAGGCAGCACAGTGTGCTCAGAGAGGACTGGGACAAGCCGGGATTTGTCAATCAATTAGCAGAAAAAACTCCGACGGTGCCAATGGATCCTGGCCAGCAAACCGAGTCTGATAAGTTTGTCCAAGTCAGTTACGAGGACATGAATACCAAGGATTTCGGGGATACGGACAATGCCCAAGACGGAGCAATGCTCTTATCCGTTACCGGGATGGACGAGAACGGATTTCTGCAAGCACCTCAAGCCGATGCTGTTAACCAGCTCAACGCAGGAGAAGTTAACTGCAACTCCTTGAACGGGCATGAAATTCTGCTTCAAGTAGCAGGCATAGAGCAAGCAGCAATGGGAAACGCGGATTTGTCTTTGACGGAGGTACCGCAGCTTAGTATAAGTGAGTCTGATGCTAGACTGGCTGAATCTGTCCTAGGAAATGCTTACATATTCGGTGAAGACGGAGGAGACATAATGTTTTATGTCCTGGACAACGCACCAATTATTTCAGAATACTAG
- Protein Sequence
- MSLPVAERKINETEVSLSACSVCGQQHDTTTCPFLLDLQHIKDAPVLSRARQTIPKNLEVTRMADGSTTVISKIELPRGTTFGPLYAKRIWTMNPLTHFPIRVFGNSASETYHLDYSNENNSNWMCFVEPASNAKEQNLICYQVKQDIFYTAMRTIAIGEELRVWYAPYYALKMKMPLFNVDFANVSATIPEPEIQQIIKTESSKDQIGLLNKDVAQELAEKLPAQHLGARDDKATWNCRICSTVICSVVAYAKHLMEHYKPLIGVYCNICNKKCNNVTALERHKNSKHPEESSNDSVVGIPTSESQQQQNAQTVFLNISDSEGQTSDAMKDILEKFKAGKAITESSLLSTSSVNEKENHTDLPILDTNSLNVNDLLQNNSSLIENSSLKSILENQCLNMNLGLSAMTDSMLSENISATDSVKFNVEELASELLDIVPDVDNINKRIDNLECDICDKKFDKVDYLYRHLRKHTGEFICPSCLAVFARKENLLSHNCFSQKLDYHYECPYCQKPFILKKYLRRHMVKHTEWNNCKWCHAPFSSPSELEAHKCSKPRHECLQCNKRFVHRAHLNRHLKLHENPKPTVKRVRKKQPDKPVICEKCGDVFKSPYSLKQHLSLHGERAFECDICQRRFHRIGVLKEHKAIHQAAQIPCTICGKKLKSKKALDIHMLLHGNKKHQCDKCEKSFFQKCNYLKHYNQVHGDKNTYKCEHCTSQFTNKSSFDKHVENHTKPAQFMCASCPKSFHKEYQLKRHTQSSHSGIVYRCPYCQMAGRHRHSMRRHFERQHSVLREDWDKPGFVNQLAEKTPTVPMDPGQQTESDKFVQVSYEDMNTKDFGDTDNAQDGAMLLSVTGMDENGFLQAPQADAVNQLNAGEVNCNSLNGHEILLQVAGIEQAAMGNADLSLTEVPQLSISESDARLAESVLGNAYIFGEDGGDIMFYVLDNAPIISEY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01200421;
- 90% Identity
- iTF_00938989;
- 80% Identity
- -